RNA–Protein interactions for RNA: ENST00000559942.5

PPP1R3E-204, Transcript of protein phosphatase 1 regulatory subunit 3E, humanhuman

TSL 1 (best)

Gene PPP1R3E, Length 1,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3E-204ENST00000559942 OR2T3Q8NH03 318 aa9.85□□□□□ -0.83
PPP1R3E-204ENST00000559942 TSPAN18Q96SJ8 248 aa9.85□□□□□ -0.83
PPP1R3E-204ENST00000559942 MSTO1Q9BUK6 570 aa9.85□□□□□ -0.83
PPP1R3E-204ENST00000559942 BBS2Q9BXC9 721 aa9.85□□□□□ -0.83
PPP1R3E-204ENST00000559942 CCSER1Q9C0I3 900 aa9.85□□□□□ -0.83
PPP1R3E-204ENST00000559942 PPP4R2Q9NY27 417 aa9.85□□□□□ -0.83
PPP1R3E-204ENST00000559942 MAP4K5Q9Y4K4 846 aa9.85□□□□□ -0.83
PPP1R3E-204ENST00000559942 CROCCQ5TZA2 2017 aa9.85□□□□□ -0.83
PPP1R3E-204ENST00000559942 LY6G6EA0A0G2JKS1 128 aa9.84□□□□□ -0.83
PPP1R3E-204ENST00000559942 CPED1A4D0V7 1026 aa9.84□□□□□ -0.83
PPP1R3E-204ENST00000559942 TMEM200CA6NKL6 621 aa9.84□□□□□ -0.83
PPP1R3E-204ENST00000559942 HNRNPDLO14979 420 aaKnown RBP9.84□□□□□ -0.83
PPP1R3E-204ENST00000559942 HUS1O60921 280 aa9.84□□□□□ -0.83
PPP1R3E-204ENST00000559942 CNTN5O94779 1100 aa9.84□□□□□ -0.83
PPP1R3E-204ENST00000559942 CISD3P0C7P0 127 aa9.84□□□□□ -0.83
PPP1R3E-204ENST00000559942 ALPPL2P10696 532 aa9.84□□□□□ -0.83
PPP1R3E-204ENST00000559942 TYRP14679 529 aa9.84□□□□□ -0.83
PPP1R3E-204ENST00000559942 CD1EP15812 388 aa9.84□□□□□ -0.83
PPP1R3E-204ENST00000559942 ACO1P21399 889 aaKnown RBP9.84□□□□□ -0.83
PPP1R3E-204ENST00000559942 SMTNP53814 917 aa9.84□□□□□ -0.83
PPP1R3E-204ENST00000559942 HDAC4P56524 1084 aa9.84□□□□□ -0.83
PPP1R3E-204ENST00000559942 CYP27A1Q02318 531 aa9.84□□□□□ -0.83
PPP1R3E-204ENST00000559942 SEPT6Q14141 434 aa9.84□□□□□ -0.83
PPP1R3E-204ENST00000559942 KYAT1Q16773 422 aa9.84□□□□□ -0.83
PPP1R3E-204ENST00000559942 DSG4Q86SJ6 1040 aa9.84□□□□□ -0.83
PPP1R3E-204ENST00000559942 CD302Q8IX05 232 aa9.84□□□□□ -0.83
PPP1R3E-204ENST00000559942 UCMAQ8WVF2 138 aa9.84□□□□□ -0.83
PPP1R3E-204ENST00000559942 KCNB2Q92953 911 aa9.84□□□□□ -0.83
PPP1R3E-204ENST00000559942 MYLPFQ96A32 169 aa9.84□□□□□ -0.83
PPP1R3E-204ENST00000559942 ZNF274Q96GC6 653 aaPredicted RBP9.84□□□□□ -0.83
PPP1R3E-204ENST00000559942 SERAC1Q96JX3 654 aa9.84□□□□□ -0.83
PPP1R3E-204ENST00000559942 ZNF560Q96MR9 790 aa9.84□□□□□ -0.83
PPP1R3E-204ENST00000559942 NTPCRQ9BSD7 190 aaKnown RBP9.84□□□□□ -0.83
PPP1R3E-204ENST00000559942 UCKL1Q9NWZ5 548 aa9.84□□□□□ -0.83
PPP1R3E-204ENST00000559942 MAGEC2Q9UBF1 373 aaPredicted RBP9.84□□□□□ -0.83
PPP1R3E-204ENST00000559942 LRWD1Q9UFC0 647 aa9.84□□□□□ -0.83
PPP1R3E-204ENST00000559942 CPSF3Q9UKF6 684 aaKnown RBP9.84□□□□□ -0.83
PPP1R3E-204ENST00000559942 U3KQA8 63 aa9.84□□□□□ -0.83
PPP1R3E-204ENST00000559942 UNC13CQ8NB66 2214 aa9.83□□□□□ -0.84
PPP1R3E-204ENST00000559942 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.83□□□□□ -0.84
PPP1R3E-204ENST00000559942 COCHO43405 550 aa9.83□□□□□ -0.84
PPP1R3E-204ENST00000559942 MAGEC1O60732 1142 aa9.83□□□□□ -0.84
PPP1R3E-204ENST00000559942 CDKL5O76039 1030 aa9.83□□□□□ -0.84
PPP1R3E-204ENST00000559942 DNTTP04053 509 aa9.83□□□□□ -0.84
PPP1R3E-204ENST00000559942 OR52Z1P0C646 297 aa9.83□□□□□ -0.84
PPP1R3E-204ENST00000559942 PLS3P13797 630 aa9.83□□□□□ -0.84
PPP1R3E-204ENST00000559942 HGFP14210 728 aa9.83□□□□□ -0.84
PPP1R3E-204ENST00000559942 MUTP22033 750 aa9.83□□□□□ -0.84
PPP1R3E-204ENST00000559942 PSMA5P28066 241 aa9.83□□□□□ -0.84
PPP1R3E-204ENST00000559942 POLR2BP30876 1174 aaKnown RBP9.83□□□□□ -0.84
PPP1R3E-204ENST00000559942 ANP32AP39687 249 aaKnown RBP9.83□□□□□ -0.84
PPP1R3E-204ENST00000559942 MAGEA11P43364 429 aa9.83□□□□□ -0.84
PPP1R3E-204ENST00000559942 PDX1P52945 283 aa9.83□□□□□ -0.84
PPP1R3E-204ENST00000559942 ZNF177Q13360 481 aaPredicted RBP9.83□□□□□ -0.84
PPP1R3E-204ENST00000559942 ZNF174Q15697 407 aa9.83□□□□□ -0.84
PPP1R3E-204ENST00000559942 SCARA3Q6AZY7 606 aa9.83□□□□□ -0.84
PPP1R3E-204ENST00000559942 CRTC1Q6UUV9 634 aa9.83□□□□□ -0.84
PPP1R3E-204ENST00000559942 C1orf186Q6ZWK4 172 aa9.83□□□□□ -0.84
PPP1R3E-204ENST00000559942 MFSD2AQ8NA29 543 aa9.83□□□□□ -0.84
PPP1R3E-204ENST00000559942 SNX29Q8TEQ0 813 aa9.83□□□□□ -0.84
PPP1R3E-204ENST00000559942 APOBEC4Q8WW27 367 aaKnown RBP9.83□□□□□ -0.84
PPP1R3E-204ENST00000559942 P2RY11Q96G91 374 aa9.83□□□□□ -0.84
PPP1R3E-204ENST00000559942 FUBP3Q96I24 572 aaKnown RBP eCLIP9.83□□□□□ -0.84
PPP1R3E-204ENST00000559942 FAM84AQ96KN4 292 aa9.83□□□□□ -0.84
PPP1R3E-204ENST00000559942 SPATA17Q96L03 361 aa9.83□□□□□ -0.84
PPP1R3E-204ENST00000559942 TMUB1Q9BVT8 246 aa9.83□□□□□ -0.84
PPP1R3E-204ENST00000559942 TTLL2Q9BWV7 592 aa9.83□□□□□ -0.84
PPP1R3E-204ENST00000559942 C17orf75Q9HAS0 396 aa9.83□□□□□ -0.84
PPP1R3E-204ENST00000559942 CBX8Q9HC52 389 aa9.83□□□□□ -0.84
PPP1R3E-204ENST00000559942 PREBQ9HCU5 417 aa9.83□□□□□ -0.84
PPP1R3E-204ENST00000559942 PLK2Q9NYY3 685 aa9.83□□□□□ -0.84
PPP1R3E-204ENST00000559942 WDR35Q9P2L0 1181 aa9.83□□□□□ -0.84
PPP1R3E-204ENST00000559942 ORC3Q9UBD5 711 aaPredicted RBP9.83□□□□□ -0.84
PPP1R3E-204ENST00000559942 PISDQ9UG56 409 aa9.83□□□□□ -0.84
PPP1R3E-204ENST00000559942 DNM3Q9UQ16 869 aa9.83□□□□□ -0.84
PPP1R3E-204ENST00000559942 DERAQ9Y315 318 aa9.83□□□□□ -0.84
PPP1R3E-204ENST00000559942 PTPRJQ12913 1337 aa9.82□□□□□ -0.84
PPP1R3E-204ENST00000559942 PRAMEF33A0A0G2JMD5 474 aa9.82□□□□□ -0.84
PPP1R3E-204ENST00000559942 NPHP3-ACAD11A0A0J9YXS1 232 aa9.82□□□□□ -0.84
PPP1R3E-204ENST00000559942 A0A1W2PQ27 194 aa9.82□□□□□ -0.84
PPP1R3E-204ENST00000559942 A0A1W2PQ64 194 aa9.82□□□□□ -0.84
PPP1R3E-204ENST00000559942 A0A1W2PQC6 194 aa9.82□□□□□ -0.84
PPP1R3E-204ENST00000559942 F8VP50 259 aa9.82□□□□□ -0.84
PPP1R3E-204ENST00000559942 K7EM74 188 aa9.82□□□□□ -0.84
PPP1R3E-204ENST00000559942 PRAMEF10O60809 474 aa9.82□□□□□ -0.84
PPP1R3E-204ENST00000559942 JMJD7P0C870 316 aa9.82□□□□□ -0.84
PPP1R3E-204ENST00000559942 GIMD1P0DJR0 217 aa9.82□□□□□ -0.84
PPP1R3E-204ENST00000559942 PRKCHP24723 683 aa9.82□□□□□ -0.84
PPP1R3E-204ENST00000559942 LMO2P25791 158 aa9.82□□□□□ -0.84
PPP1R3E-204ENST00000559942 ZBTB16Q05516 673 aa9.82□□□□□ -0.84
PPP1R3E-204ENST00000559942 ZNF234Q14588 700 aa9.82□□□□□ -0.84
PPP1R3E-204ENST00000559942 E2F5Q15329 346 aa9.82□□□□□ -0.84
PPP1R3E-204ENST00000559942 CDKN3Q16667 212 aa9.82□□□□□ -0.84
PPP1R3E-204ENST00000559942 TTC31Q49AM3 519 aaPredicted RBP9.82□□□□□ -0.84
PPP1R3E-204ENST00000559942 TDRD10Q5VZ19 366 aaKnown RBP9.82□□□□□ -0.84
PPP1R3E-204ENST00000559942 TCTN3Q6NUS6 607 aa9.82□□□□□ -0.84
PPP1R3E-204ENST00000559942 C4orf50Q6ZRC1 276 aa9.82□□□□□ -0.84
PPP1R3E-204ENST00000559942 ASB18Q6ZVZ8 466 aa9.82□□□□□ -0.84
PPP1R3E-204ENST00000559942 RUFY3Q7L099 469 aa9.82□□□□□ -0.84
PPP1R3E-204ENST00000559942 EFL1Q7Z2Z2 1120 aaKnown RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms