RNA–Protein interactions for RNA: ENST00000558373.5

CTDSPL2-202, Transcript of CTD small phosphatase like 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSPL2, Length 4,255 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-202ENST00000558373 RABL3Q5HYI8 236 aa1.48□□□□□ -2.17
CTDSPL2-202ENST00000558373 CRB2Q5IJ48 1285 aa1.48□□□□□ -2.17
CTDSPL2-202ENST00000558373 PLEKHS1Q5SXH7 462 aa1.48□□□□□ -2.17
CTDSPL2-202ENST00000558373 MFSD4BQ5TF39 518 aa1.48□□□□□ -2.17
CTDSPL2-202ENST00000558373 ARHGAP40Q5TG30 622 aa1.48□□□□□ -2.17
CTDSPL2-202ENST00000558373 ATG16L1Q676U5 607 aa1.48□□□□□ -2.17
CTDSPL2-202ENST00000558373 SULT6B1Q6IMI4 303 aa1.48□□□□□ -2.17
CTDSPL2-202ENST00000558373 KRT80Q6KB66 452 aa1.48□□□□□ -2.17
CTDSPL2-202ENST00000558373 SWSAP1Q6NVH7 229 aa1.48□□□□□ -2.17
CTDSPL2-202ENST00000558373 ACSM6Q6P461 480 aa1.48□□□□□ -2.17
CTDSPL2-202ENST00000558373 GGT6Q6P531 493 aa1.48□□□□□ -2.17
CTDSPL2-202ENST00000558373 LVRNQ6Q4G3 990 aa1.48□□□□□ -2.17
CTDSPL2-202ENST00000558373 PIK3AP1Q6ZUJ8 805 aa1.48□□□□□ -2.17
CTDSPL2-202ENST00000558373 UBE3BQ7Z3V4 1068 aa1.48□□□□□ -2.17
CTDSPL2-202ENST00000558373 KRT77Q7Z794 578 aa1.48□□□□□ -2.17
CTDSPL2-202ENST00000558373 HERC6Q8IVU3 1022 aa1.48□□□□□ -2.17
CTDSPL2-202ENST00000558373 MAPKAPK5Q8IW41 473 aa1.48□□□□□ -2.17
CTDSPL2-202ENST00000558373 ARHGEF19Q8IW93 802 aa1.48□□□□□ -2.17
CTDSPL2-202ENST00000558373 LNX2Q8N448 690 aa1.48□□□□□ -2.17
CTDSPL2-202ENST00000558373 FAM71DQ8N9W8 422 aa1.48□□□□□ -2.17
CTDSPL2-202ENST00000558373 PCSK9Q8NBP7 692 aaKnown RBP1.48□□□□□ -2.17
CTDSPL2-202ENST00000558373 REPS2Q8NFH8 660 aa1.48□□□□□ -2.17
CTDSPL2-202ENST00000558373 ARHGEF2Q92974 986 aaKnown RBP1.48□□□□□ -2.17
CTDSPL2-202ENST00000558373 CEP95Q96GE4 821 aa1.48□□□□□ -2.17
CTDSPL2-202ENST00000558373 PBKQ96KB5 322 aa1.48□□□□□ -2.17
CTDSPL2-202ENST00000558373 SPATA25Q9BR10 227 aa1.48□□□□□ -2.17
CTDSPL2-202ENST00000558373 MMTAG2Q9BU76 263 aaKnown RBP1.48□□□□□ -2.17
CTDSPL2-202ENST00000558373 ABHD16BQ9H3Z7 469 aa1.48□□□□□ -2.17
CTDSPL2-202ENST00000558373 RABEP2Q9H5N1 569 aa1.48□□□□□ -2.17
CTDSPL2-202ENST00000558373 AGO3Q9H9G7 860 aaKnown RBP1.48□□□□□ -2.17
CTDSPL2-202ENST00000558373 EIF2B3Q9NR50 452 aaKnown RBP1.48□□□□□ -2.17
CTDSPL2-202ENST00000558373 MAP3K20Q9NYL2 800 aaKnown RBP1.48□□□□□ -2.17
CTDSPL2-202ENST00000558373 GRHPRQ9UBQ7 328 aa1.48□□□□□ -2.17
CTDSPL2-202ENST00000558373 IPO11Q9UI26 975 aaKnown RBP1.48□□□□□ -2.17
CTDSPL2-202ENST00000558373 AMFRQ9UKV5 643 aa1.48□□□□□ -2.17
CTDSPL2-202ENST00000558373 ASAP1Q9ULH1 1129 aa1.48□□□□□ -2.17
CTDSPL2-202ENST00000558373 NOL7Q9UMY1 257 aaKnown RBP1.48□□□□□ -2.17
CTDSPL2-202ENST00000558373 DDX52Q9Y2R4 599 aaKnown RBP eCLIP1.48□□□□□ -2.17
CTDSPL2-202ENST00000558373 RUSC2Q8N2Y8 1516 aa1.48□□□□□ -2.17
CTDSPL2-202ENST00000558373 XDHP47989 1333 aa1.48□□□□□ -2.17
CTDSPL2-202ENST00000558373 PREX2Q70Z35 1606 aa1.47□□□□□ -2.17
CTDSPL2-202ENST00000558373 LAMA3Q16787 3333 aa1.47□□□□□ -2.17
CTDSPL2-202ENST00000558373 NHSQ6T4R5 1651 aa1.47□□□□□ -2.17
CTDSPL2-202ENST00000558373 DNPH1O43598 174 aa1.47□□□□□ -2.17
CTDSPL2-202ENST00000558373 CDKL5O76039 1030 aa1.47□□□□□ -2.17
CTDSPL2-202ENST00000558373 ENO1P06733 434 aaKnown RBP1.47□□□□□ -2.17
CTDSPL2-202ENST00000558373 TPOP07202 933 aa1.47□□□□□ -2.17
CTDSPL2-202ENST00000558373 WEE2P0C1S8 567 aa1.47□□□□□ -2.17
CTDSPL2-202ENST00000558373 HKR1P10072 659 aa1.47□□□□□ -2.17
CTDSPL2-202ENST00000558373 IL1R1P14778 569 aa1.47□□□□□ -2.17
CTDSPL2-202ENST00000558373 RXRAP19793 462 aa1.47□□□□□ -2.17
CTDSPL2-202ENST00000558373 TCEA1P23193 301 aaKnown RBP1.47□□□□□ -2.17
CTDSPL2-202ENST00000558373 GSTM2P28161 218 aa1.47□□□□□ -2.17
CTDSPL2-202ENST00000558373 GKP32189 559 aa1.47□□□□□ -2.17
CTDSPL2-202ENST00000558373 PSMB10P40306 273 aa1.47□□□□□ -2.17
CTDSPL2-202ENST00000558373 NCKAP1LP55160 1127 aa1.47□□□□□ -2.17
CTDSPL2-202ENST00000558373 CASP6P55212 293 aa1.47□□□□□ -2.17
CTDSPL2-202ENST00000558373 CCDC15Q0P6D6 951 aa1.47□□□□□ -2.17
CTDSPL2-202ENST00000558373 SF3A3Q12874 501 aaKnown RBP eCLIP1.47□□□□□ -2.17
CTDSPL2-202ENST00000558373 PRPF4BQ13523 1007 aaKnown RBP1.47□□□□□ -2.17
CTDSPL2-202ENST00000558373 DCTN2Q13561 401 aaKnown RBP1.47□□□□□ -2.17
CTDSPL2-202ENST00000558373 FAM187BQ17R55 369 aa1.47□□□□□ -2.17
CTDSPL2-202ENST00000558373 RNF151Q2KHN1 245 aa1.47□□□□□ -2.17
CTDSPL2-202ENST00000558373 P3H1Q32P28 736 aa1.47□□□□□ -2.17
CTDSPL2-202ENST00000558373 DPCR1Q3MIW9 517 aa1.47□□□□□ -2.17
CTDSPL2-202ENST00000558373 FAM102AQ5T9C2 384 aaPredicted RBP1.47□□□□□ -2.17
CTDSPL2-202ENST00000558373 GPR139Q6DWJ6 353 aa1.47□□□□□ -2.17
CTDSPL2-202ENST00000558373 ISM2Q6H9L7 571 aa1.47□□□□□ -2.17
CTDSPL2-202ENST00000558373 ATF7IPQ6VMQ6 1270 aa1.47□□□□□ -2.17
CTDSPL2-202ENST00000558373 PTCHD4Q6ZW05 846 aa1.47□□□□□ -2.17
CTDSPL2-202ENST00000558373 TMC8Q8IU68 726 aa1.47□□□□□ -2.17
CTDSPL2-202ENST00000558373 LCORLQ8N3X6 602 aa1.47□□□□□ -2.17
CTDSPL2-202ENST00000558373 NME8Q8N427 588 aa1.47□□□□□ -2.17
CTDSPL2-202ENST00000558373 ESX1Q8N693 406 aa1.47□□□□□ -2.17
CTDSPL2-202ENST00000558373 C12orf76Q8N812 135 aaPredicted RBP1.47□□□□□ -2.17
CTDSPL2-202ENST00000558373 MCUQ8NE86 351 aa1.47□□□□□ -2.17
CTDSPL2-202ENST00000558373 OR56A1Q8NGH5 318 aa1.47□□□□□ -2.17
CTDSPL2-202ENST00000558373 CEP70Q8NHQ1 597 aa1.47□□□□□ -2.17
CTDSPL2-202ENST00000558373 GSDMBQ8TAX9 411 aa1.47□□□□□ -2.17
CTDSPL2-202ENST00000558373 IPO4Q8TEX9 1081 aaKnown RBP1.47□□□□□ -2.17
CTDSPL2-202ENST00000558373 DNAAF4Q8WXU2 420 aa1.47□□□□□ -2.17
CTDSPL2-202ENST00000558373 HAS1Q92839 578 aa1.47□□□□□ -2.17
CTDSPL2-202ENST00000558373 KCNC2Q96PR1 638 aa1.47□□□□□ -2.17
CTDSPL2-202ENST00000558373 FYTTD1Q96QD9 318 aaKnown RBP1.47□□□□□ -2.17
CTDSPL2-202ENST00000558373 PRRX2Q99811 253 aa1.47□□□□□ -2.17
CTDSPL2-202ENST00000558373 EGFL8Q99944 293 aa1.47□□□□□ -2.17
CTDSPL2-202ENST00000558373 SLX1AQ9BQ83 275 aa1.47□□□□□ -2.17
CTDSPL2-202ENST00000558373 SDF4Q9BRK5 362 aa1.47□□□□□ -2.17
CTDSPL2-202ENST00000558373 TPSD1Q9BZJ3 242 aa1.47□□□□□ -2.17
CTDSPL2-202ENST00000558373 GPR63Q9BZJ6 419 aa1.47□□□□□ -2.17
CTDSPL2-202ENST00000558373 TTYH3Q9C0H2 523 aa1.47□□□□□ -2.17
CTDSPL2-202ENST00000558373 ENTPD7Q9NQZ7 604 aa1.47□□□□□ -2.17
CTDSPL2-202ENST00000558373 KRT84Q9NSB2 600 aa1.47□□□□□ -2.17
CTDSPL2-202ENST00000558373 FBXO34Q9NWN3 711 aa1.47□□□□□ -2.17
CTDSPL2-202ENST00000558373 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP1.47□□□□□ -2.17
CTDSPL2-202ENST00000558373 MGAT4CQ9UBM8 478 aa1.47□□□□□ -2.17
CTDSPL2-202ENST00000558373 HCFC2Q9Y5Z7 792 aa1.47□□□□□ -2.17
CTDSPL2-202ENST00000558373 SIRT4Q9Y6E7 314 aaPredicted RBP1.47□□□□□ -2.17
CTDSPL2-202ENST00000558373 APOBP04114 4563 aaKnown RBP1.47□□□□□ -2.17
CTDSPL2-202ENST00000558373 UBR2Q8IWV8 1755 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms