RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 OAS1P00973 400 aaKnown RBP12.54□□□□□ -0.4
HMGB1P8-201ENST00000558211 HMBSP08397 361 aa12.54□□□□□ -0.4
HMGB1P8-201ENST00000558211 IRF1P10914 325 aa12.54□□□□□ -0.4
HMGB1P8-201ENST00000558211 LAMP2P13473 410 aa12.54□□□□□ -0.4
HMGB1P8-201ENST00000558211 VIPR2P41587 438 aa12.54□□□□□ -0.4
HMGB1P8-201ENST00000558211 GALCP54803 685 aa12.54□□□□□ -0.4
HMGB1P8-201ENST00000558211 DCAF6Q58WW2 860 aa12.54□□□□□ -0.4
HMGB1P8-201ENST00000558211 FAM78AQ5JUQ0 283 aa12.54□□□□□ -0.4
HMGB1P8-201ENST00000558211 SNX30Q5VWJ9 437 aa12.54□□□□□ -0.4
HMGB1P8-201ENST00000558211 SYPL2Q5VXT5 272 aa12.54□□□□□ -0.4
HMGB1P8-201ENST00000558211 DNAJC24Q6P3W2 148 aa12.54□□□□□ -0.4
HMGB1P8-201ENST00000558211 RAD9BQ6WBX8 426 aa12.54□□□□□ -0.4
HMGB1P8-201ENST00000558211 MIB1Q86YT6 1006 aa12.54□□□□□ -0.4
HMGB1P8-201ENST00000558211 ARID3BQ8IVW6 561 aaPredicted RBP12.54□□□□□ -0.4
HMGB1P8-201ENST00000558211 CCDC170Q8IYT3 715 aa12.54□□□□□ -0.4
HMGB1P8-201ENST00000558211 CMTM8Q8IZV2 173 aa12.54□□□□□ -0.4
HMGB1P8-201ENST00000558211 EMC1Q8N766 993 aa12.54□□□□□ -0.4
HMGB1P8-201ENST00000558211 ATXN2LQ8WWM7 1075 aaKnown RBP12.54□□□□□ -0.4
HMGB1P8-201ENST00000558211 ASB2Q96Q27 587 aa12.54□□□□□ -0.4
HMGB1P8-201ENST00000558211 PACSIN1Q9BY11 444 aa12.54□□□□□ -0.4
HMGB1P8-201ENST00000558211 THAP2Q9H0W7 228 aa12.54□□□□□ -0.4
HMGB1P8-201ENST00000558211 POPDC2Q9HBU9 364 aa12.54□□□□□ -0.4
HMGB1P8-201ENST00000558211 GKN1Q9NS71 199 aa12.54□□□□□ -0.4
HMGB1P8-201ENST00000558211 CLIC5Q9NZA1 410 aa12.54□□□□□ -0.4
HMGB1P8-201ENST00000558211 GDE1Q9NZC3 331 aa12.54□□□□□ -0.4
HMGB1P8-201ENST00000558211 COX16Q9P0S2 106 aa12.54□□□□□ -0.4
HMGB1P8-201ENST00000558211 WDR35Q9P2L0 1181 aa12.54□□□□□ -0.4
HMGB1P8-201ENST00000558211 CPQQ9Y646 472 aa12.54□□□□□ -0.4
HMGB1P8-201ENST00000558211 EPN1Q9Y6I3 576 aaPredicted RBP12.54□□□□□ -0.4
HMGB1P8-201ENST00000558211 C5orf42Q9H799 3197 aa12.53□□□□□ -0.4
HMGB1P8-201ENST00000558211 SLC12A8A0AV02 714 aa12.53□□□□□ -0.4
HMGB1P8-201ENST00000558211 ZNF263O14978 683 aa12.53□□□□□ -0.4
HMGB1P8-201ENST00000558211 PRAMEF12O95522 483 aa12.53□□□□□ -0.4
HMGB1P8-201ENST00000558211 FYNP06241 537 aa12.53□□□□□ -0.4
HMGB1P8-201ENST00000558211 H2AFZP0C0S5 128 aa12.53□□□□□ -0.4
HMGB1P8-201ENST00000558211 KRT3P12035 628 aa12.53□□□□□ -0.4
HMGB1P8-201ENST00000558211 MAGEA1P43355 309 aa12.53□□□□□ -0.4
HMGB1P8-201ENST00000558211 SPA17Q15506 151 aa12.53□□□□□ -0.4
HMGB1P8-201ENST00000558211 DCUN1D2Q6PH85 259 aa12.53□□□□□ -0.4
HMGB1P8-201ENST00000558211 H2AFVQ71UI9 128 aa12.53□□□□□ -0.4
HMGB1P8-201ENST00000558211 SLC26A9Q7LBE3 791 aa12.53□□□□□ -0.4
HMGB1P8-201ENST00000558211 TADA2BQ86TJ2 420 aa12.53□□□□□ -0.4
HMGB1P8-201ENST00000558211 TMEM139Q8IV31 216 aa12.53□□□□□ -0.4
HMGB1P8-201ENST00000558211 LRRC8AQ8IWT6 810 aa12.53□□□□□ -0.4
HMGB1P8-201ENST00000558211 JOSD2Q8TAC2 188 aa12.53□□□□□ -0.4
HMGB1P8-201ENST00000558211 SMARCD2Q92925 531 aa12.53□□□□□ -0.4
HMGB1P8-201ENST00000558211 TRIM11Q96F44 468 aa12.53□□□□□ -0.4
HMGB1P8-201ENST00000558211 VCPIP1Q96JH7 1222 aa12.53□□□□□ -0.4
HMGB1P8-201ENST00000558211 ASB16Q96NS5 453 aa12.53□□□□□ -0.4
HMGB1P8-201ENST00000558211 TDP1Q9NUW8 608 aa12.53□□□□□ -0.4
HMGB1P8-201ENST00000558211 ASNSD1Q9NWL6 643 aa12.53□□□□□ -0.4
HMGB1P8-201ENST00000558211 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.53□□□□□ -0.4
HMGB1P8-201ENST00000558211 MARCH2Q9P0N8 246 aa12.53□□□□□ -0.4
HMGB1P8-201ENST00000558211 NENFQ9UMX5 172 aa12.53□□□□□ -0.4
HMGB1P8-201ENST00000558211 CCL26Q9Y258 94 aa12.53□□□□□ -0.4
HMGB1P8-201ENST00000558211 MYO10Q9HD67 2058 aa12.53□□□□□ -0.4
HMGB1P8-201ENST00000558211 SPTBN5Q9NRC6 3674 aaKnown RBP12.53□□□□□ -0.4
HMGB1P8-201ENST00000558211 COL6A3P12111 3177 aa12.52□□□□□ -0.41
HMGB1P8-201ENST00000558211 ANKRD62A6NC57 917 aa12.52□□□□□ -0.41
HMGB1P8-201ENST00000558211 EIF3CLB5ME19 914 aaKnown RBP12.52□□□□□ -0.41
HMGB1P8-201ENST00000558211 SCAMP3O14828 347 aaKnown RBP12.52□□□□□ -0.41
HMGB1P8-201ENST00000558211 MSI1O43347 362 aaKnown RBP12.52□□□□□ -0.41
HMGB1P8-201ENST00000558211 DAB1O75553 588 aa12.52□□□□□ -0.41
HMGB1P8-201ENST00000558211 NDUFA10O95299 355 aa12.52□□□□□ -0.41
HMGB1P8-201ENST00000558211 IPO7O95373 1038 aaKnown RBP12.52□□□□□ -0.41
HMGB1P8-201ENST00000558211 GLI1P08151 1106 aa12.52□□□□□ -0.41
HMGB1P8-201ENST00000558211 MYBL1P10243 752 aa12.52□□□□□ -0.41
HMGB1P8-201ENST00000558211 CD33P20138 364 aa12.52□□□□□ -0.41
HMGB1P8-201ENST00000558211 FLT3P36888 993 aa12.52□□□□□ -0.41
HMGB1P8-201ENST00000558211 TUBP50607 506 aa12.52□□□□□ -0.41
HMGB1P8-201ENST00000558211 GPC5P78333 572 aa12.52□□□□□ -0.41
HMGB1P8-201ENST00000558211 PITX1P78337 314 aaPredicted RBP12.52□□□□□ -0.41
HMGB1P8-201ENST00000558211 TANGO2Q6ICL3 276 aa12.52□□□□□ -0.41
HMGB1P8-201ENST00000558211 PARM1Q6UWI2 310 aa12.52□□□□□ -0.41
HMGB1P8-201ENST00000558211 C3orf20Q8ND61 904 aa12.52□□□□□ -0.41
HMGB1P8-201ENST00000558211 ACRBPQ8NEB7 543 aa12.52□□□□□ -0.41
HMGB1P8-201ENST00000558211 DQX1Q8TE96 717 aaKnown RBP12.52□□□□□ -0.41
HMGB1P8-201ENST00000558211 RXFP2Q8WXD0 754 aa12.52□□□□□ -0.41
HMGB1P8-201ENST00000558211 RSAD2Q8WXG1 361 aa12.52□□□□□ -0.41
HMGB1P8-201ENST00000558211 CTNNBL1Q8WYA6 563 aaPredicted RBP12.52□□□□□ -0.41
HMGB1P8-201ENST00000558211 USP13Q92995 863 aaPredicted RBP12.52□□□□□ -0.41
HMGB1P8-201ENST00000558211 ARHGEF26Q96DR7 871 aa12.52□□□□□ -0.41
HMGB1P8-201ENST00000558211 IFT43Q96FT9 208 aa12.52□□□□□ -0.41
HMGB1P8-201ENST00000558211 PDLIM2Q96JY6 352 aa12.52□□□□□ -0.41
HMGB1P8-201ENST00000558211 ZNF830Q96NB3 372 aaPredicted RBP12.52□□□□□ -0.41
HMGB1P8-201ENST00000558211 MCEEQ96PE7 176 aa12.52□□□□□ -0.41
HMGB1P8-201ENST00000558211 CDK5RAP1Q96SZ6 601 aaKnown RBP12.52□□□□□ -0.41
HMGB1P8-201ENST00000558211 EIF3CQ99613 913 aaKnown RBP12.52□□□□□ -0.41
HMGB1P8-201ENST00000558211 KXD1Q9BQD3 176 aa12.52□□□□□ -0.41
HMGB1P8-201ENST00000558211 TRIM62Q9BVG3 475 aa12.52□□□□□ -0.41
HMGB1P8-201ENST00000558211 ZFP14Q9HCL3 533 aa12.52□□□□□ -0.41
HMGB1P8-201ENST00000558211 BRD7Q9NPI1 651 aa12.52□□□□□ -0.41
HMGB1P8-201ENST00000558211 OLA1Q9NTK5 396 aaKnown RBP12.52□□□□□ -0.41
HMGB1P8-201ENST00000558211 PARVAQ9NVD7 372 aa12.52□□□□□ -0.41
HMGB1P8-201ENST00000558211 ZMYM5Q9UJ78 669 aa12.52□□□□□ -0.41
HMGB1P8-201ENST00000558211 TMEM59LQ9UK28 342 aa12.52□□□□□ -0.41
HMGB1P8-201ENST00000558211 TFR2Q9UP52 801 aa12.52□□□□□ -0.41
HMGB1P8-201ENST00000558211 PCDHA13Q9Y5I0 950 aa12.52□□□□□ -0.41
HMGB1P8-201ENST00000558211 ZFP37Q9Y6Q3 630 aaPredicted RBP12.52□□□□□ -0.41
HMGB1P8-201ENST00000558211 NUP210Q8TEM1 1887 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms