RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 FAM3BP58499 235 aaPredicted RBP4.07□□□□□ -1.76
TDP1-217ENST00000557782 TAP2Q03519 686 aa4.07□□□□□ -1.76
TDP1-217ENST00000557782 HGFACQ04756 655 aa4.07□□□□□ -1.76
TDP1-217ENST00000557782 TMEM115Q12893 351 aaPredicted RBP4.07□□□□□ -1.76
TDP1-217ENST00000557782 SEMA3BQ13214 749 aa4.07□□□□□ -1.76
TDP1-217ENST00000557782 BFSP2Q13515 415 aa4.07□□□□□ -1.76
TDP1-217ENST00000557782 FHL3Q13643 280 aa4.07□□□□□ -1.76
TDP1-217ENST00000557782 TNFAIP1Q13829 316 aa4.07□□□□□ -1.76
TDP1-217ENST00000557782 PRR31Q5SQ13 230 aa4.07□□□□□ -1.76
TDP1-217ENST00000557782 ZNF362Q5T0B9 420 aaPredicted RBP4.07□□□□□ -1.76
TDP1-217ENST00000557782 ERMARDQ5T6L9 678 aa4.07□□□□□ -1.76
TDP1-217ENST00000557782 KAZNQ674X7 775 aa4.07□□□□□ -1.76
TDP1-217ENST00000557782 CDC73Q6P1J9 531 aa4.07□□□□□ -1.76
TDP1-217ENST00000557782 CCDC186Q7Z3E2 898 aa4.07□□□□□ -1.76
TDP1-217ENST00000557782 ADGRE4PQ86SQ3 457 aa4.07□□□□□ -1.76
TDP1-217ENST00000557782 ADGRA1Q86SQ6 560 aa4.07□□□□□ -1.76
TDP1-217ENST00000557782 SDCCAG8Q86SQ7 713 aaPredicted RBP4.07□□□□□ -1.76
TDP1-217ENST00000557782 MON1AQ86VX9 555 aa4.07□□□□□ -1.76
TDP1-217ENST00000557782 XYLT1Q86Y38 959 aa4.07□□□□□ -1.76
TDP1-217ENST00000557782 IGDCC3Q8IVU1 814 aa4.07□□□□□ -1.76
TDP1-217ENST00000557782 LMNTD2Q8IXW0 634 aa4.07□□□□□ -1.76
TDP1-217ENST00000557782 CCAR2Q8N163 923 aaKnown RBP4.07□□□□□ -1.76
TDP1-217ENST00000557782 TMCO5AQ8N6Q1 288 aa4.07□□□□□ -1.76
TDP1-217ENST00000557782 RNF169Q8NCN4 708 aa4.07□□□□□ -1.76
TDP1-217ENST00000557782 GDAP1Q8TB36 358 aa4.07□□□□□ -1.76
TDP1-217ENST00000557782 POC1BQ8TC44 478 aa4.07□□□□□ -1.76
TDP1-217ENST00000557782 FAM149B1Q96BN6 582 aa4.07□□□□□ -1.76
TDP1-217ENST00000557782 PERPQ96FX8 193 aa4.07□□□□□ -1.76
TDP1-217ENST00000557782 CCDC34Q96HJ3 373 aa4.07□□□□□ -1.76
TDP1-217ENST00000557782 CMTM3Q96MX0 182 aa4.07□□□□□ -1.76
TDP1-217ENST00000557782 VN1R3Q9BXE9 311 aa4.07□□□□□ -1.76
TDP1-217ENST00000557782 CLPBQ9H078 707 aa4.07□□□□□ -1.76
TDP1-217ENST00000557782 KCNK9Q9NPC2 374 aa4.07□□□□□ -1.76
TDP1-217ENST00000557782 PAK6Q9NQU5 681 aaPredicted RBP4.07□□□□□ -1.76
TDP1-217ENST00000557782 GIMAP4Q9NUV9 329 aa4.07□□□□□ -1.76
TDP1-217ENST00000557782 POGKQ9P215 609 aa4.07□□□□□ -1.76
TDP1-217ENST00000557782 SUCLA2Q9P2R7 463 aaPredicted RBP4.07□□□□□ -1.76
TDP1-217ENST00000557782 SLCO3A1Q9UIG8 710 aa4.07□□□□□ -1.76
TDP1-217ENST00000557782 CD207Q9UJ71 328 aa4.07□□□□□ -1.76
TDP1-217ENST00000557782 ANAPC5Q9UJX4 755 aa4.07□□□□□ -1.76
TDP1-217ENST00000557782 RIMKLBQ9ULI2 386 aa4.07□□□□□ -1.76
TDP1-217ENST00000557782 KNSTRNQ9Y448 316 aa4.07□□□□□ -1.76
TDP1-217ENST00000557782 TEX13CA0A0J9YWL9 993 aa4.06□□□□□ -1.76
TDP1-217ENST00000557782 FAM237BA0A1B0GVD1 139 aa4.06□□□□□ -1.76
TDP1-217ENST00000557782 A0A1W2PRX2 142 aa4.06□□□□□ -1.76
TDP1-217ENST00000557782 UBE2QL1A1L167 161 aa4.06□□□□□ -1.76
TDP1-217ENST00000557782 C19orf81C9J6K1 198 aa4.06□□□□□ -1.76
TDP1-217ENST00000557782 M0QYT0 321 aa4.06□□□□□ -1.76
TDP1-217ENST00000557782 AGPSO00116 658 aa4.06□□□□□ -1.76
TDP1-217ENST00000557782 TP73O15350 636 aa4.06□□□□□ -1.76
TDP1-217ENST00000557782 SLC7A4O43246 635 aa4.06□□□□□ -1.76
TDP1-217ENST00000557782 ENTPD3O75355 529 aa4.06□□□□□ -1.76
TDP1-217ENST00000557782 MED26O95402 600 aa4.06□□□□□ -1.76
TDP1-217ENST00000557782 CYP1A1P04798 512 aaPredicted RBP4.06□□□□□ -1.76
TDP1-217ENST00000557782 URODP06132 367 aa4.06□□□□□ -1.76
TDP1-217ENST00000557782 THEGLP0DJG4 465 aa4.06□□□□□ -1.76
TDP1-217ENST00000557782 IFNAR1P17181 557 aa4.06□□□□□ -1.76
TDP1-217ENST00000557782 MMP8P22894 467 aa4.06□□□□□ -1.76
TDP1-217ENST00000557782 GCSHP23434 173 aa4.06□□□□□ -1.76
TDP1-217ENST00000557782 ICAM3P32942 547 aa4.06□□□□□ -1.76
TDP1-217ENST00000557782 HSD17B4P51659 736 aa4.06□□□□□ -1.76
TDP1-217ENST00000557782 CDH8P55286 799 aa4.06□□□□□ -1.76
TDP1-217ENST00000557782 OLR1P78380 273 aa4.06□□□□□ -1.76
TDP1-217ENST00000557782 RIN1Q13671 783 aa4.06□□□□□ -1.76
TDP1-217ENST00000557782 NFYCQ13952 458 aa4.06□□□□□ -1.76
TDP1-217ENST00000557782 ST3GAL2Q16842 350 aa4.06□□□□□ -1.76
TDP1-217ENST00000557782 FAM214AQ32MH5 1076 aa4.06□□□□□ -1.76
TDP1-217ENST00000557782 SLC9B1Q4ZJI4 515 aa4.06□□□□□ -1.76
TDP1-217ENST00000557782 C9orf152Q5JTZ5 239 aa4.06□□□□□ -1.76
TDP1-217ENST00000557782 TTI2Q6NXR4 508 aa4.06□□□□□ -1.76
TDP1-217ENST00000557782 MTHFD1LQ6UB35 978 aa4.06□□□□□ -1.76
TDP1-217ENST00000557782 PET117Q6UWS5 81 aa4.06□□□□□ -1.76
TDP1-217ENST00000557782 TREML4Q6UXN2 200 aa4.06□□□□□ -1.76
TDP1-217ENST00000557782 CHST9Q7L1S5 443 aa4.06□□□□□ -1.76
TDP1-217ENST00000557782 RTL10Q7L3V2 364 aa4.06□□□□□ -1.76
TDP1-217ENST00000557782 CHST3Q7LGC8 479 aa4.06□□□□□ -1.76
TDP1-217ENST00000557782 METTL23Q86XA0 190 aa4.06□□□□□ -1.76
TDP1-217ENST00000557782 DNAAF5Q86Y56 855 aa4.06□□□□□ -1.76
TDP1-217ENST00000557782 TICAM1Q8IUC6 712 aa4.06□□□□□ -1.76
TDP1-217ENST00000557782 EPHX4Q8IUS5 362 aa4.06□□□□□ -1.76
TDP1-217ENST00000557782 P3H2Q8IVL5 708 aa4.06□□□□□ -1.76
TDP1-217ENST00000557782 TP53INP2Q8IXH6 220 aa4.06□□□□□ -1.76
TDP1-217ENST00000557782 CCDC170Q8IYT3 715 aa4.06□□□□□ -1.76
TDP1-217ENST00000557782 C11orf44Q8N8P7 122 aa4.06□□□□□ -1.76
TDP1-217ENST00000557782 POC5Q8NA72 575 aa4.06□□□□□ -1.76
TDP1-217ENST00000557782 NSUN7Q8NE18 718 aaKnown RBP4.06□□□□□ -1.76
TDP1-217ENST00000557782 APPL2Q8NEU8 664 aa4.06□□□□□ -1.76
TDP1-217ENST00000557782 FLAD1Q8NFF5 587 aa4.06□□□□□ -1.76
TDP1-217ENST00000557782 DEPDC1BQ8WUY9 529 aa4.06□□□□□ -1.76
TDP1-217ENST00000557782 OSCP1Q8WVF1 389 aa4.06□□□□□ -1.76
TDP1-217ENST00000557782 PRPF31Q8WWY3 499 aaKnown RBP4.06□□□□□ -1.76
TDP1-217ENST00000557782 ST8SIA2Q92186 375 aa4.06□□□□□ -1.76
TDP1-217ENST00000557782 SNX21Q969T3 373 aa4.06□□□□□ -1.76
TDP1-217ENST00000557782 VPS33AQ96AX1 596 aa4.06□□□□□ -1.76
TDP1-217ENST00000557782 INTS12Q96CB8 462 aaKnown RBP4.06□□□□□ -1.76
TDP1-217ENST00000557782 RMDN1Q96DB5 314 aa4.06□□□□□ -1.76
TDP1-217ENST00000557782 RNFT2Q96EX2 444 aa4.06□□□□□ -1.76
TDP1-217ENST00000557782 PGAP3Q96FM1 320 aaPredicted RBP4.06□□□□□ -1.76
TDP1-217ENST00000557782 DCAF5Q96JK2 942 aa4.06□□□□□ -1.76
TDP1-217ENST00000557782 CCDC43Q96MW1 224 aaKnown RBP4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms