RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 LRRC71Q8N4P6 559 aa12.16□□□□□ -0.46
VIPAS39-211ENST00000557658 ZNF280CQ8ND82 737 aa12.16□□□□□ -0.46
VIPAS39-211ENST00000557658 FAM81AQ8TBF8 368 aa12.16□□□□□ -0.46
VIPAS39-211ENST00000557658 UBE2OQ9C0C9 1292 aaKnown RBP12.16□□□□□ -0.46
VIPAS39-211ENST00000557658 ATXN10Q9UBB4 475 aa12.16□□□□□ -0.46
VIPAS39-211ENST00000557658 C15orf38-AP3S2A0A0A6YYH1 394 aa12.16□□□□□ -0.46
VIPAS39-211ENST00000557658 A6NJR5 290 aa12.16□□□□□ -0.46
VIPAS39-211ENST00000557658 INO80B-WBP1J3KQ70 363 aa12.16□□□□□ -0.46
VIPAS39-211ENST00000557658 ZNF195O14628 629 aa12.16□□□□□ -0.46
VIPAS39-211ENST00000557658 ATP9BO43861 1147 aa12.16□□□□□ -0.46
VIPAS39-211ENST00000557658 COX4I1P13073 169 aa12.16□□□□□ -0.46
VIPAS39-211ENST00000557658 ADORA2AP29274 412 aa12.16□□□□□ -0.46
VIPAS39-211ENST00000557658 TCF7P36402 384 aaPredicted RBP12.16□□□□□ -0.46
VIPAS39-211ENST00000557658 HMGCS2P54868 508 aa12.16□□□□□ -0.46
VIPAS39-211ENST00000557658 MTTPP55157 894 aa12.16□□□□□ -0.46
VIPAS39-211ENST00000557658 OGFRL1Q5TC84 451 aaPredicted RBP12.16□□□□□ -0.46
VIPAS39-211ENST00000557658 VWA5B1Q5TIE3 1220 aa12.16□□□□□ -0.46
VIPAS39-211ENST00000557658 HEATR6Q6AI08 1181 aaKnown RBP12.16□□□□□ -0.46
VIPAS39-211ENST00000557658 LCLAT1Q6UWP7 414 aa12.16□□□□□ -0.46
VIPAS39-211ENST00000557658 FRMD7Q6ZUT3 714 aa12.16□□□□□ -0.46
VIPAS39-211ENST00000557658 ARPINQ7Z6K5 226 aa12.16□□□□□ -0.46
VIPAS39-211ENST00000557658 SATL1Q86VE3 508 aa12.16□□□□□ -0.46
VIPAS39-211ENST00000557658 CDR2LQ86X02 465 aaPredicted RBP12.16□□□□□ -0.46
VIPAS39-211ENST00000557658 NIM1KQ8IY84 436 aa12.16□□□□□ -0.46
VIPAS39-211ENST00000557658 EXOC8Q8IYI6 725 aa12.16□□□□□ -0.46
VIPAS39-211ENST00000557658 QKIQ96PU8 341 aaKnown RBP eCLIP12.16□□□□□ -0.46
VIPAS39-211ENST00000557658 RTKNQ9BST9 563 aa12.16□□□□□ -0.46
VIPAS39-211ENST00000557658 INO80BQ9C086 356 aaPredicted RBP12.16□□□□□ -0.46
VIPAS39-211ENST00000557658 CDT1Q9H211 546 aa12.16□□□□□ -0.46
VIPAS39-211ENST00000557658 Q9H521 79 aa12.16□□□□□ -0.46
VIPAS39-211ENST00000557658 COPG2Q9UBF2 871 aa12.16□□□□□ -0.46
VIPAS39-211ENST00000557658 TSPAN16Q9UKR8 245 aa12.16□□□□□ -0.46
VIPAS39-211ENST00000557658 KIAA1257Q9ULG3 409 aa12.16□□□□□ -0.46
VIPAS39-211ENST00000557658 DOCK1Q14185 1865 aa12.15□□□□□ -0.46
VIPAS39-211ENST00000557658 H3BNX3 289 aa12.15□□□□□ -0.46
VIPAS39-211ENST00000557658 DCXO43602 365 aa12.15□□□□□ -0.46
VIPAS39-211ENST00000557658 ITGA2BP08514 1039 aa12.15□□□□□ -0.46
VIPAS39-211ENST00000557658 FDFT1P37268 417 aa12.15□□□□□ -0.46
VIPAS39-211ENST00000557658 ALDH1A3P47895 512 aa12.15□□□□□ -0.46
VIPAS39-211ENST00000557658 NR2C2P49116 596 aa12.15□□□□□ -0.46
VIPAS39-211ENST00000557658 RGS7P49802 495 aa12.15□□□□□ -0.46
VIPAS39-211ENST00000557658 GBE1Q04446 702 aa12.15□□□□□ -0.46
VIPAS39-211ENST00000557658 FSTL1Q12841 308 aa12.15□□□□□ -0.46
VIPAS39-211ENST00000557658 R3HDM1Q15032 1099 aaKnown RBP12.15□□□□□ -0.46
VIPAS39-211ENST00000557658 KCNT2Q6UVM3 1135 aa12.15□□□□□ -0.46
VIPAS39-211ENST00000557658 TMEM192Q8IY95 271 aa12.15□□□□□ -0.46
VIPAS39-211ENST00000557658 PHTF2Q8N3S3 785 aa12.15□□□□□ -0.46
VIPAS39-211ENST00000557658 SEPT1Q8WYJ6 367 aa12.15□□□□□ -0.46
VIPAS39-211ENST00000557658 HIC2Q96JB3 615 aa12.15□□□□□ -0.46
VIPAS39-211ENST00000557658 FZD8Q9H461 694 aa12.15□□□□□ -0.46
VIPAS39-211ENST00000557658 VRTNQ9H8Y1 702 aa12.15□□□□□ -0.46
VIPAS39-211ENST00000557658 C6orf203Q9P0P8 240 aaPredicted RBP12.15□□□□□ -0.46
VIPAS39-211ENST00000557658 SLC17A6Q9P2U8 582 aa12.15□□□□□ -0.46
VIPAS39-211ENST00000557658 MORF4L1Q9UBU8 362 aa12.15□□□□□ -0.46
VIPAS39-211ENST00000557658 BARX2Q9UMQ3 279 aaPredicted RBP12.15□□□□□ -0.46
VIPAS39-211ENST00000557658 INPP5FQ9Y2H2 1132 aa12.15□□□□□ -0.46
VIPAS39-211ENST00000557658 CDY2AQ9Y6F7 541 aa12.15□□□□□ -0.46
VIPAS39-211ENST00000557658 CDY1Q9Y6F8 540 aa12.15□□□□□ -0.46
VIPAS39-211ENST00000557658 LACTBL1A8MY62 500 aa12.15□□□□□ -0.47
VIPAS39-211ENST00000557658 B4GALT5O43286 388 aa12.15□□□□□ -0.47
VIPAS39-211ENST00000557658 PENKP01210 267 aaPredicted RBP12.15□□□□□ -0.47
VIPAS39-211ENST00000557658 CYP3A5P20815 502 aa12.15□□□□□ -0.47
VIPAS39-211ENST00000557658 RGS2P41220 211 aa12.15□□□□□ -0.47
VIPAS39-211ENST00000557658 GARSP41250 739 aaKnown RBP12.15□□□□□ -0.47
VIPAS39-211ENST00000557658 NDST1P52848 882 aa12.15□□□□□ -0.47
VIPAS39-211ENST00000557658 STILQ15468 1287 aa12.15□□□□□ -0.47
VIPAS39-211ENST00000557658 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.15□□□□□ -0.47
VIPAS39-211ENST00000557658 MAP1SQ66K74 1059 aaPredicted RBP12.15□□□□□ -0.47
VIPAS39-211ENST00000557658 FBXL19Q6PCT2 694 aa12.15□□□□□ -0.47
VIPAS39-211ENST00000557658 AEBP2Q6ZN18 517 aaPredicted RBP12.15□□□□□ -0.47
VIPAS39-211ENST00000557658 MARVELD2Q8N4S9 558 aa12.15□□□□□ -0.47
VIPAS39-211ENST00000557658 EFCAB3Q8N7B9 438 aa12.15□□□□□ -0.47
VIPAS39-211ENST00000557658 DGCR14Q96DF8 476 aaKnown RBP12.15□□□□□ -0.47
VIPAS39-211ENST00000557658 CLMNQ96JQ2 1002 aa12.15□□□□□ -0.47
VIPAS39-211ENST00000557658 GCNAQ96QF7 691 aa12.15□□□□□ -0.47
VIPAS39-211ENST00000557658 TMEM216Q9P0N5 145 aa12.15□□□□□ -0.47
VIPAS39-211ENST00000557658 TXNDC16Q9P2K2 825 aa12.15□□□□□ -0.47
VIPAS39-211ENST00000557658 PSMD13Q9UNM6 376 aa12.15□□□□□ -0.47
VIPAS39-211ENST00000557658 AFG3L2Q9Y4W6 797 aa12.15□□□□□ -0.47
VIPAS39-211ENST00000557658 TRIP11Q15643 1979 aa12.14□□□□□ -0.47
VIPAS39-211ENST00000557658 MYO18AQ92614 2054 aaKnown RBP12.14□□□□□ -0.47
VIPAS39-211ENST00000557658 DENRO43583 198 aaKnown RBP12.14□□□□□ -0.47
VIPAS39-211ENST00000557658 PRKCGP05129 697 aa12.14□□□□□ -0.47
VIPAS39-211ENST00000557658 CCDC130P13994 396 aa12.14□□□□□ -0.47
VIPAS39-211ENST00000557658 CPA3P15088 417 aa12.14□□□□□ -0.47
VIPAS39-211ENST00000557658 PGAM1P18669 254 aa12.14□□□□□ -0.47
VIPAS39-211ENST00000557658 TYK2P29597 1187 aa12.14□□□□□ -0.47
VIPAS39-211ENST00000557658 ARRB2P32121 409 aa12.14□□□□□ -0.47
VIPAS39-211ENST00000557658 RPL5P46777 297 aaKnown RBP12.14□□□□□ -0.47
VIPAS39-211ENST00000557658 SLC10A2Q12908 348 aaPredicted RBP12.14□□□□□ -0.47
VIPAS39-211ENST00000557658 KLF10Q13118 480 aa12.14□□□□□ -0.47
VIPAS39-211ENST00000557658 PEX6Q13608 980 aa12.14□□□□□ -0.47
VIPAS39-211ENST00000557658 CCDC153Q494R4 210 aa12.14□□□□□ -0.47
VIPAS39-211ENST00000557658 JADE1Q6IE81 842 aa12.14□□□□□ -0.47
VIPAS39-211ENST00000557658 LRRC8BQ6P9F7 803 aa12.14□□□□□ -0.47
VIPAS39-211ENST00000557658 OLFML1Q6UWY5 402 aa12.14□□□□□ -0.47
VIPAS39-211ENST00000557658 ATG14Q6ZNE5 492 aa12.14□□□□□ -0.47
VIPAS39-211ENST00000557658 TMC7Q7Z402 723 aa12.14□□□□□ -0.47
VIPAS39-211ENST00000557658 PQLC1Q8N2U9 271 aa12.14□□□□□ -0.47
VIPAS39-211ENST00000557658 TMEM130Q8N3G9 435 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms