RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 BOP1Q14137 746 aaKnown RBP5.44□□□□□ -1.54
MTHFD1-216ENST00000557539 ITPR1Q14643 2758 aa5.44□□□□□ -1.54
MTHFD1-216ENST00000557539 GRM4Q14833 912 aa5.44□□□□□ -1.54
MTHFD1-216ENST00000557539 CCNG2Q16589 344 aa5.44□□□□□ -1.54
MTHFD1-216ENST00000557539 MGAT5BQ3V5L5 792 aa5.44□□□□□ -1.54
MTHFD1-216ENST00000557539 ATXN7L2Q5T6C5 722 aaPredicted RBP5.44□□□□□ -1.54
MTHFD1-216ENST00000557539 MANEALQ5VSG8 457 aa5.44□□□□□ -1.54
MTHFD1-216ENST00000557539 ACAD10Q6JQN1 1059 aa5.44□□□□□ -1.54
MTHFD1-216ENST00000557539 NFRKBQ6P4R8 1299 aa5.44□□□□□ -1.54
MTHFD1-216ENST00000557539 BBS12Q6ZW61 710 aa5.44□□□□□ -1.54
MTHFD1-216ENST00000557539 ADGRE4PQ86SQ3 457 aa5.44□□□□□ -1.54
MTHFD1-216ENST00000557539 RSC1A1Q92681 617 aa5.44□□□□□ -1.54
MTHFD1-216ENST00000557539 RSRC1Q96IZ7 334 aaKnown RBP5.44□□□□□ -1.54
MTHFD1-216ENST00000557539 YTHDC1Q96MU7 727 aaKnown RBP5.44□□□□□ -1.54
MTHFD1-216ENST00000557539 PWWP2AQ96N64 755 aa5.44□□□□□ -1.54
MTHFD1-216ENST00000557539 DEFB118Q96PH6 123 aa5.44□□□□□ -1.54
MTHFD1-216ENST00000557539 MED15Q96RN5 788 aa5.44□□□□□ -1.54
MTHFD1-216ENST00000557539 SLC46A2Q9BY10 475 aa5.44□□□□□ -1.54
MTHFD1-216ENST00000557539 TMEM168Q9H0V1 697 aa5.44□□□□□ -1.54
MTHFD1-216ENST00000557539 VPS16Q9H269 839 aa5.44□□□□□ -1.54
MTHFD1-216ENST00000557539 FAM83DQ9H4H8 585 aa5.44□□□□□ -1.54
MTHFD1-216ENST00000557539 DNMT3BQ9UBC3 853 aaKnown RBP5.44□□□□□ -1.54
MTHFD1-216ENST00000557539 GPR34Q9UPC5 381 aa5.44□□□□□ -1.54
MTHFD1-216ENST00000557539 ANKRD26Q9UPS8 1709 aa5.44□□□□□ -1.54
MTHFD1-216ENST00000557539 ZDHHC9Q9Y397 364 aa5.44□□□□□ -1.54
MTHFD1-216ENST00000557539 TTLL3Q9Y4R7 772 aa5.44□□□□□ -1.54
MTHFD1-216ENST00000557539 CDY1Q9Y6F8 540 aa5.44□□□□□ -1.54
MTHFD1-216ENST00000557539 FBN2P35556 2912 aa5.44□□□□□ -1.54
MTHFD1-216ENST00000557539 DSPP15924 2871 aaKnown RBP5.43□□□□□ -1.54
MTHFD1-216ENST00000557539 SPTA1P02549 2419 aa5.43□□□□□ -1.54
MTHFD1-216ENST00000557539 CEP295Q9C0D2 2601 aa5.43□□□□□ -1.54
MTHFD1-216ENST00000557539 TCAF2A6NFQ2 919 aa5.43□□□□□ -1.54
MTHFD1-216ENST00000557539 TBKBP1A7MCY6 615 aa5.43□□□□□ -1.54
MTHFD1-216ENST00000557539 HOXA3O43365 443 aaPredicted RBP5.43□□□□□ -1.54
MTHFD1-216ENST00000557539 ORC4O43929 436 aa5.43□□□□□ -1.54
MTHFD1-216ENST00000557539 PEX10O60683 326 aa5.43□□□□□ -1.54
MTHFD1-216ENST00000557539 USO1O60763 962 aaKnown RBP5.43□□□□□ -1.54
MTHFD1-216ENST00000557539 ITGB1P05556 798 aa5.43□□□□□ -1.54
MTHFD1-216ENST00000557539 ARP10275 920 aa5.43□□□□□ -1.54
MTHFD1-216ENST00000557539 CAPN2P17655 700 aa5.43□□□□□ -1.54
MTHFD1-216ENST00000557539 RPL13P26373 211 aaKnown RBP5.43□□□□□ -1.54
MTHFD1-216ENST00000557539 SLC5A2P31639 672 aa5.43□□□□□ -1.54
MTHFD1-216ENST00000557539 KRT20P35900 424 aa5.43□□□□□ -1.54
MTHFD1-216ENST00000557539 LINC00310P59036 64 aa5.43□□□□□ -1.54
MTHFD1-216ENST00000557539 LILRA4P59901 499 aa5.43□□□□□ -1.54
MTHFD1-216ENST00000557539 SATB1Q01826 763 aa5.43□□□□□ -1.54
MTHFD1-216ENST00000557539 ATP1A4Q13733 1029 aa5.43□□□□□ -1.54
MTHFD1-216ENST00000557539 ANKRD1Q15327 319 aa5.43□□□□□ -1.54
MTHFD1-216ENST00000557539 TSTQ16762 297 aaKnown RBP5.43□□□□□ -1.54
MTHFD1-216ENST00000557539 BMT2Q1RMZ1 405 aa5.43□□□□□ -1.54
MTHFD1-216ENST00000557539 WDR45BQ5MNZ6 344 aa5.43□□□□□ -1.54
MTHFD1-216ENST00000557539 FAM205BPQ63HN1 556 aa5.43□□□□□ -1.54
MTHFD1-216ENST00000557539 ATG16L1Q676U5 607 aa5.43□□□□□ -1.54
MTHFD1-216ENST00000557539 SLC30A10Q6XR72 485 aa5.43□□□□□ -1.54
MTHFD1-216ENST00000557539 SYT13Q7L8C5 426 aa5.43□□□□□ -1.54
MTHFD1-216ENST00000557539 ANKS1BQ7Z6G8 1248 aa5.43□□□□□ -1.54
MTHFD1-216ENST00000557539 CHD1LQ86WJ1 897 aa5.43□□□□□ -1.54
MTHFD1-216ENST00000557539 KCNH5Q8NCM2 988 aa5.43□□□□□ -1.54
MTHFD1-216ENST00000557539 RNF169Q8NCN4 708 aa5.43□□□□□ -1.54
MTHFD1-216ENST00000557539 BPIFB1Q8TDL5 484 aa5.43□□□□□ -1.54
MTHFD1-216ENST00000557539 RABGGTAQ92696 567 aa5.43□□□□□ -1.54
MTHFD1-216ENST00000557539 TFAP2CQ92754 450 aa5.43□□□□□ -1.54
MTHFD1-216ENST00000557539 TREX2Q9BQ50 279 aaPredicted RBP5.43□□□□□ -1.54
MTHFD1-216ENST00000557539 REEP2Q9BRK0 252 aa5.43□□□□□ -1.54
MTHFD1-216ENST00000557539 TLR10Q9BXR5 811 aa5.43□□□□□ -1.54
MTHFD1-216ENST00000557539 BARX1Q9HBU1 254 aaPredicted RBP5.43□□□□□ -1.54
MTHFD1-216ENST00000557539 GCM1Q9NP62 436 aa5.43□□□□□ -1.54
MTHFD1-216ENST00000557539 G6PC2Q9NQR9 355 aa5.43□□□□□ -1.54
MTHFD1-216ENST00000557539 KRT84Q9NSB2 600 aa5.43□□□□□ -1.54
MTHFD1-216ENST00000557539 ANKFY1Q9P2R3 1169 aa5.43□□□□□ -1.54
MTHFD1-216ENST00000557539 KCND3Q9UK17 655 aa5.43□□□□□ -1.54
MTHFD1-216ENST00000557539 C19orf53Q9UNZ5 99 aaPredicted RBP5.43□□□□□ -1.54
MTHFD1-216ENST00000557539 SHOC2Q9UQ13 582 aa5.43□□□□□ -1.54
MTHFD1-216ENST00000557539 CDYLQ9Y232 598 aa5.43□□□□□ -1.54
MTHFD1-216ENST00000557539 DERAQ9Y315 318 aa5.43□□□□□ -1.54
MTHFD1-216ENST00000557539 NR2E1Q9Y466 385 aa5.43□□□□□ -1.54
MTHFD1-216ENST00000557539 NOTCH2Q04721 2471 aa5.43□□□□□ -1.54
MTHFD1-216ENST00000557539 MAP2P11137 1827 aaKnown RBP5.43□□□□□ -1.54
MTHFD1-216ENST00000557539 ADGRF5Q8IZF2 1346 aa5.43□□□□□ -1.54
MTHFD1-216ENST00000557539 ADAMTS20P59510 1910 aa5.42□□□□□ -1.54
MTHFD1-216ENST00000557539 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.42□□□□□ -1.54
MTHFD1-216ENST00000557539 PNMA6EA0A0J9YXQ4 647 aa5.42□□□□□ -1.54
MTHFD1-216ENST00000557539 TEX51A0A1B0GUA7 166 aa5.42□□□□□ -1.54
MTHFD1-216ENST00000557539 FAM90A18PA6NE21 464 aa5.42□□□□□ -1.54
MTHFD1-216ENST00000557539 FAM90A16PA6NEW6 464 aa5.42□□□□□ -1.54
MTHFD1-216ENST00000557539 MANSC4A6NHS7 340 aaPredicted RBP5.42□□□□□ -1.54
MTHFD1-216ENST00000557539 FAM90A9PA6NNJ1 464 aa5.42□□□□□ -1.54
MTHFD1-216ENST00000557539 FAM90A5PA8MXJ8 464 aa5.42□□□□□ -1.54
MTHFD1-216ENST00000557539 ZSCAN9O15535 394 aaPredicted RBP5.42□□□□□ -1.54
MTHFD1-216ENST00000557539 SRGAP2O75044 1071 aa5.42□□□□□ -1.54
MTHFD1-216ENST00000557539 LMNAP02545 664 aaKnown RBP5.42□□□□□ -1.54
MTHFD1-216ENST00000557539 FAM90A15PP0C7V4 464 aa5.42□□□□□ -1.54
MTHFD1-216ENST00000557539 FAM90A14PP0C7W9 464 aa5.42□□□□□ -1.54
MTHFD1-216ENST00000557539 MAN2A2P49641 1150 aa5.42□□□□□ -1.54
MTHFD1-216ENST00000557539 RBM5P52756 815 aaKnown RBP eCLIP5.42□□□□□ -1.54
MTHFD1-216ENST00000557539 DRG2P55039 364 aaKnown RBP5.42□□□□□ -1.54
MTHFD1-216ENST00000557539 RIPPLY3P57055 190 aa5.42□□□□□ -1.54
MTHFD1-216ENST00000557539 MEA1Q16626 185 aa5.42□□□□□ -1.54
MTHFD1-216ENST00000557539 ZIK1Q3SY52 487 aaPredicted RBP5.42□□□□□ -1.54
MTHFD1-216ENST00000557539 CCDC184Q52MB2 194 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms