RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 DUOXA2Q1HG44 320 aa6.18□□□□□ -1.42
VPS33B-207ENST00000557470 MAP9Q49MG5 647 aa6.18□□□□□ -1.42
VPS33B-207ENST00000557470 HECTD3Q5T447 861 aa6.18□□□□□ -1.42
VPS33B-207ENST00000557470 SNX30Q5VWJ9 437 aa6.18□□□□□ -1.42
VPS33B-207ENST00000557470 LYPD4Q6UWN0 246 aa6.18□□□□□ -1.42
VPS33B-207ENST00000557470 TPGS1Q6ZTW0 290 aa6.18□□□□□ -1.42
VPS33B-207ENST00000557470 CBWD2Q8IUF1 395 aa6.18□□□□□ -1.42
VPS33B-207ENST00000557470 NUP93Q8N1F7 819 aa6.18□□□□□ -1.42
VPS33B-207ENST00000557470 GPD1LQ8N335 351 aa6.18□□□□□ -1.42
VPS33B-207ENST00000557470 B3GALNT2Q8NCR0 500 aa6.18□□□□□ -1.42
VPS33B-207ENST00000557470 GLIS3Q8NEA6 775 aa6.18□□□□□ -1.42
VPS33B-207ENST00000557470 PDZD8Q8NEN9 1154 aa6.18□□□□□ -1.42
VPS33B-207ENST00000557470 OR6B3Q8NGW1 331 aa6.18□□□□□ -1.42
VPS33B-207ENST00000557470 SETD7Q8WTS6 366 aaKnown RBP6.18□□□□□ -1.42
VPS33B-207ENST00000557470 SCFD1Q8WVM8 642 aa6.18□□□□□ -1.42
VPS33B-207ENST00000557470 DNASE2BQ8WZ79 361 aa6.18□□□□□ -1.42
VPS33B-207ENST00000557470 OVCA2Q8WZ82 227 aa6.18□□□□□ -1.42
VPS33B-207ENST00000557470 GTPBP3Q969Y2 492 aaKnown RBP6.18□□□□□ -1.42
VPS33B-207ENST00000557470 TOE1Q96GM8 510 aaKnown RBP6.18□□□□□ -1.42
VPS33B-207ENST00000557470 SEC16BQ96JE7 1060 aa6.18□□□□□ -1.42
VPS33B-207ENST00000557470 DEPDC7Q96QD5 511 aa6.18□□□□□ -1.42
VPS33B-207ENST00000557470 KCNK16Q96T55 309 aa6.18□□□□□ -1.42
VPS33B-207ENST00000557470 GPR174Q9BXC1 333 aa6.18□□□□□ -1.42
VPS33B-207ENST00000557470 BBS2Q9BXC9 721 aa6.18□□□□□ -1.42
VPS33B-207ENST00000557470 MIR1-1HGQ9H1L0 117 aa6.18□□□□□ -1.42
VPS33B-207ENST00000557470 GAREM1Q9H706 876 aa6.18□□□□□ -1.42
VPS33B-207ENST00000557470 C12orf49Q9H741 205 aa6.18□□□□□ -1.42
VPS33B-207ENST00000557470 TIMMDC1Q9NPL8 285 aa6.18□□□□□ -1.42
VPS33B-207ENST00000557470 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.18□□□□□ -1.42
VPS33B-207ENST00000557470 OLFML3Q9NRN5 406 aa6.18□□□□□ -1.42
VPS33B-207ENST00000557470 GMIPQ9P107 970 aa6.18□□□□□ -1.42
VPS33B-207ENST00000557470 USP36Q9P275 1121 aaKnown RBP6.18□□□□□ -1.42
VPS33B-207ENST00000557470 KIF3AQ9Y496 699 aa6.18□□□□□ -1.42
VPS33B-207ENST00000557470 NFE2L3Q9Y4A8 694 aa6.18□□□□□ -1.42
VPS33B-207ENST00000557470 PTPRBP23467 1997 aa6.18□□□□□ -1.42
VPS33B-207ENST00000557470 GOLGA4Q13439 2230 aaKnown RBP6.18□□□□□ -1.42
VPS33B-207ENST00000557470 KNL1Q8NG31 2342 aa6.17□□□□□ -1.42
VPS33B-207ENST00000557470 A0A087WV48 116 aa6.17□□□□□ -1.42
VPS33B-207ENST00000557470 FRMD3A2A2Y4 597 aa6.17□□□□□ -1.42
VPS33B-207ENST00000557470 FAM149AA5PLN7 773 aa6.17□□□□□ -1.42
VPS33B-207ENST00000557470 TRABD2BA6NFA1 517 aa6.17□□□□□ -1.42
VPS33B-207ENST00000557470 ZNF233A6NK53 670 aa6.17□□□□□ -1.42
VPS33B-207ENST00000557470 A8MXQ7 604 aa6.17□□□□□ -1.42
VPS33B-207ENST00000557470 KCNJ18B7U540 433 aa6.17□□□□□ -1.42
VPS33B-207ENST00000557470 GFRA2O00451 464 aa6.17□□□□□ -1.42
VPS33B-207ENST00000557470 BCAT2O15382 392 aaPredicted RBP6.17□□□□□ -1.42
VPS33B-207ENST00000557470 C1QL1O75973 258 aa6.17□□□□□ -1.42
VPS33B-207ENST00000557470 CER1O95813 267 aa6.17□□□□□ -1.42
VPS33B-207ENST00000557470 TBX18O95935 607 aa6.17□□□□□ -1.42
VPS33B-207ENST00000557470 CST3P01034 146 aaPredicted RBP6.17□□□□□ -1.42
VPS33B-207ENST00000557470 THBS1P07996 1170 aa6.17□□□□□ -1.42
VPS33B-207ENST00000557470 CISD3P0C7P0 127 aa6.17□□□□□ -1.42
VPS33B-207ENST00000557470 ZNF883P0CG24 379 aa6.17□□□□□ -1.42
VPS33B-207ENST00000557470 DLATP10515 647 aaKnown RBP6.17□□□□□ -1.42
VPS33B-207ENST00000557470 NCAM1P13591 858 aa6.17□□□□□ -1.42
VPS33B-207ENST00000557470 IDEP14735 1019 aa6.17□□□□□ -1.42
VPS33B-207ENST00000557470 GJB2P29033 226 aa6.17□□□□□ -1.42
VPS33B-207ENST00000557470 MATKP42679 507 aa6.17□□□□□ -1.42
VPS33B-207ENST00000557470 DGKGP49619 791 aa6.17□□□□□ -1.42
VPS33B-207ENST00000557470 TNNC1P63316 161 aa6.17□□□□□ -1.42
VPS33B-207ENST00000557470 ALCAMQ13740 583 aa6.17□□□□□ -1.42
VPS33B-207ENST00000557470 HLA-BQ31612 363 aa6.17□□□□□ -1.42
VPS33B-207ENST00000557470 WDR72Q3MJ13 1102 aa6.17□□□□□ -1.42
VPS33B-207ENST00000557470 FUT11Q495W5 492 aa6.17□□□□□ -1.42
VPS33B-207ENST00000557470 C16orf46Q6P387 395 aa6.17□□□□□ -1.42
VPS33B-207ENST00000557470 HTR3DQ70Z44 454 aa6.17□□□□□ -1.42
VPS33B-207ENST00000557470 SV2BQ7L1I2 683 aa6.17□□□□□ -1.42
VPS33B-207ENST00000557470 TRAPPC11Q7Z392 1133 aa6.17□□□□□ -1.42
VPS33B-207ENST00000557470 FAM35AQ86V20 835 aa6.17□□□□□ -1.42
VPS33B-207ENST00000557470 WDR49Q8IV35 697 aa6.17□□□□□ -1.42
VPS33B-207ENST00000557470 BHMTQ93088 406 aa6.17□□□□□ -1.42
VPS33B-207ENST00000557470 P2RY11Q96G91 374 aa6.17□□□□□ -1.42
VPS33B-207ENST00000557470 SCYL1Q96KG9 808 aa6.17□□□□□ -1.42
VPS33B-207ENST00000557470 XPO6Q96QU8 1125 aaKnown RBP6.17□□□□□ -1.42
VPS33B-207ENST00000557470 MKRN2Q9H000 416 aaKnown RBP6.17□□□□□ -1.42
VPS33B-207ENST00000557470 NACA2Q9H009 215 aa6.17□□□□□ -1.42
VPS33B-207ENST00000557470 ETNK1Q9HBU6 452 aa6.17□□□□□ -1.42
VPS33B-207ENST00000557470 TM7SF3Q9NS93 570 aa6.17□□□□□ -1.42
VPS33B-207ENST00000557470 KRT82Q9NSB4 513 aa6.17□□□□□ -1.42
VPS33B-207ENST00000557470 WSB2Q9NYS7 404 aaPredicted RBP6.17□□□□□ -1.42
VPS33B-207ENST00000557470 IL37Q9NZH6 218 aa6.17□□□□□ -1.42
VPS33B-207ENST00000557470 HSPBP1Q9NZL4 362 aa6.17□□□□□ -1.42
VPS33B-207ENST00000557470 MARK1Q9P0L2 795 aa6.17□□□□□ -1.42
VPS33B-207ENST00000557470 BTBD3Q9Y2F9 522 aa6.17□□□□□ -1.42
VPS33B-207ENST00000557470 SLCO1B1Q9Y6L6 691 aa6.17□□□□□ -1.42
VPS33B-207ENST00000557470 A0A1B0GVT2 93 aa6.16□□□□□ -1.42
VPS33B-207ENST00000557470 CCDC189A1A4V9 331 aa6.16□□□□□ -1.42
VPS33B-207ENST00000557470 FAM92AA1XBS5 289 aa6.16□□□□□ -1.42
VPS33B-207ENST00000557470 METTL12A8MUP2 240 aa6.16□□□□□ -1.42
VPS33B-207ENST00000557470 KIAA0391O15091 583 aaKnown RBP6.16□□□□□ -1.42
VPS33B-207ENST00000557470 FLRT2O43155 660 aa6.16□□□□□ -1.42
VPS33B-207ENST00000557470 TLR5O60602 858 aa6.16□□□□□ -1.42
VPS33B-207ENST00000557470 FAM163BP0C2L3 166 aa6.16□□□□□ -1.42
VPS33B-207ENST00000557470 ABCG1P45844 678 aa6.16□□□□□ -1.42
VPS33B-207ENST00000557470 MASP1P48740 699 aa6.16□□□□□ -1.42
VPS33B-207ENST00000557470 CSNK1EP49674 416 aaKnown RBP6.16□□□□□ -1.42
VPS33B-207ENST00000557470 TPMTP51580 245 aa6.16□□□□□ -1.42
VPS33B-207ENST00000557470 MYL6P60660 151 aa6.16□□□□□ -1.42
VPS33B-207ENST00000557470 SRSF11Q05519 484 aaKnown RBP6.16□□□□□ -1.42
VPS33B-207ENST00000557470 KCNMA1Q12791 1236 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms