RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 SLC14A1Q13336 389 aa16.55■□□□□ 0.24
TUBB3-213ENST00000557262 CAMK2GQ13555 558 aaPredicted RBP16.55■□□□□ 0.24
TUBB3-213ENST00000557262 HNRNPDQ14103 355 aaKnown RBP16.55■□□□□ 0.24
TUBB3-213ENST00000557262 MPP7Q5T2T1 576 aa16.55■□□□□ 0.24
TUBB3-213ENST00000557262 CHST9Q7L1S5 443 aa16.55■□□□□ 0.24
TUBB3-213ENST00000557262 RRAGAQ7L523 313 aa16.55■□□□□ 0.24
TUBB3-213ENST00000557262 KIAA0907Q7Z7F0 614 aaPredicted RBP16.55■□□□□ 0.24
TUBB3-213ENST00000557262 OR2I1PQ8NGU4 316 aa16.55■□□□□ 0.24
TUBB3-213ENST00000557262 NELFBQ8WX92 580 aa16.55■□□□□ 0.24
TUBB3-213ENST00000557262 GOLGA1Q92805 767 aa16.55■□□□□ 0.24
TUBB3-213ENST00000557262 KAT5Q92993 513 aa16.55■□□□□ 0.24
TUBB3-213ENST00000557262 AZIN2Q96A70 460 aa16.55■□□□□ 0.24
TUBB3-213ENST00000557262 SCNM1Q9BWG6 230 aa16.55■□□□□ 0.24
TUBB3-213ENST00000557262 ABCB8Q9NUT2 735 aa16.55■□□□□ 0.24
TUBB3-213ENST00000557262 PCNX2A6NKB5 2137 aa16.55■□□□□ 0.24
TUBB3-213ENST00000557262 ADAMTS9Q9P2N4 1935 aa16.55■□□□□ 0.24
TUBB3-213ENST00000557262 A0A1B0GTW7 788 aa16.54■□□□□ 0.24
TUBB3-213ENST00000557262 SPAARA0A1B0GVQ0 90 aa16.54■□□□□ 0.24
TUBB3-213ENST00000557262 C1QTNF9BB2RNN3 333 aa16.54■□□□□ 0.24
TUBB3-213ENST00000557262 M0QYV0 167 aa16.54■□□□□ 0.24
TUBB3-213ENST00000557262 FBXO21O94952 628 aa16.54■□□□□ 0.24
TUBB3-213ENST00000557262 GNA14O95837 355 aa16.54■□□□□ 0.24
TUBB3-213ENST00000557262 IGLV3-27P01718 113 aa16.54■□□□□ 0.24
TUBB3-213ENST00000557262 C1QTNF9P0C862 333 aa16.54■□□□□ 0.24
TUBB3-213ENST00000557262 HLA-EP13747 358 aa16.54■□□□□ 0.24
TUBB3-213ENST00000557262 BMP6P22004 513 aa16.54■□□□□ 0.24
TUBB3-213ENST00000557262 RDXP35241 583 aaKnown RBP16.54■□□□□ 0.24
TUBB3-213ENST00000557262 SLC11A2P49281 568 aa16.54■□□□□ 0.24
TUBB3-213ENST00000557262 SIM1P81133 766 aaPredicted RBP16.54■□□□□ 0.24
TUBB3-213ENST00000557262 GCNT1Q02742 428 aa16.54■□□□□ 0.24
TUBB3-213ENST00000557262 RING1Q06587 406 aa16.54■□□□□ 0.24
TUBB3-213ENST00000557262 KCNH2Q12809 1159 aa16.54■□□□□ 0.24
TUBB3-213ENST00000557262 MORC3Q14149 939 aa16.54■□□□□ 0.24
TUBB3-213ENST00000557262 PIK3R6Q5UE93 754 aa16.54■□□□□ 0.24
TUBB3-213ENST00000557262 NUGGCQ68CJ6 796 aa16.54■□□□□ 0.24
TUBB3-213ENST00000557262 UNQ6494/PRO21346Q6UXR6 183 aa16.54■□□□□ 0.24
TUBB3-213ENST00000557262 ADIPOR2Q86V24 386 aa16.54■□□□□ 0.24
TUBB3-213ENST00000557262 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.54■□□□□ 0.24
TUBB3-213ENST00000557262 OR2T3Q8NH03 318 aa16.54■□□□□ 0.24
TUBB3-213ENST00000557262 ADAM33Q9BZ11 813 aa16.54■□□□□ 0.24
TUBB3-213ENST00000557262 ZDHHC5Q9C0B5 715 aa16.54■□□□□ 0.24
TUBB3-213ENST00000557262 TMEM245Q9H330 911 aa16.54■□□□□ 0.24
TUBB3-213ENST00000557262 GGA2Q9UJY4 613 aa16.54■□□□□ 0.24
TUBB3-213ENST00000557262 GOLGA6L7A0A1B0GV03 622 aa16.53■□□□□ 0.24
TUBB3-213ENST00000557262 IRAK2O43187 625 aa16.53■□□□□ 0.24
TUBB3-213ENST00000557262 ACSL4O60488 711 aa16.53■□□□□ 0.24
TUBB3-213ENST00000557262 GJB3O75712 270 aa16.53■□□□□ 0.24
TUBB3-213ENST00000557262 CALCAP01258 141 aa16.53■□□□□ 0.24
TUBB3-213ENST00000557262 ATP5BP06576 529 aaKnown RBP16.53■□□□□ 0.24
TUBB3-213ENST00000557262 PABPC1P11940 636 aaKnown RBP16.53■□□□□ 0.24
TUBB3-213ENST00000557262 TBX4P57082 545 aa16.53■□□□□ 0.24
TUBB3-213ENST00000557262 FNDC3BQ53EP0 1204 aaKnown RBP16.53■□□□□ 0.24
TUBB3-213ENST00000557262 DCAF12L1Q5VU92 463 aa16.53■□□□□ 0.24
TUBB3-213ENST00000557262 MBLAC2Q68D91 279 aa16.53■□□□□ 0.24
TUBB3-213ENST00000557262 RFWD3Q6PCD5 774 aa16.53■□□□□ 0.24
TUBB3-213ENST00000557262 ARHGEF19Q8IW93 802 aa16.53■□□□□ 0.24
TUBB3-213ENST00000557262 TRIM59Q8IWR1 403 aa16.53■□□□□ 0.24
TUBB3-213ENST00000557262 AHI1Q8N157 1196 aa16.53■□□□□ 0.24
TUBB3-213ENST00000557262 CLEC4CQ8WTT0 213 aa16.53■□□□□ 0.24
TUBB3-213ENST00000557262 CYB5D2Q8WUJ1 264 aa16.53■□□□□ 0.24
TUBB3-213ENST00000557262 MIS12Q9H081 205 aa16.53■□□□□ 0.24
TUBB3-213ENST00000557262 MIR1-1HGQ9H1L0 117 aa16.53■□□□□ 0.24
TUBB3-213ENST00000557262 SUN2Q9UH99 717 aa16.53■□□□□ 0.24
TUBB3-213ENST00000557262 PCDH15Q96QU1 1955 aa16.53■□□□□ 0.24
TUBB3-213ENST00000557262 H0Y626 953 aa16.52■□□□□ 0.24
TUBB3-213ENST00000557262 TBL1XO60907 577 aa16.52■□□□□ 0.24
TUBB3-213ENST00000557262 TRIM16O95361 564 aa16.52■□□□□ 0.24
TUBB3-213ENST00000557262 DLDP09622 509 aaKnown RBP16.52■□□□□ 0.24
TUBB3-213ENST00000557262 C7P10643 843 aa16.52■□□□□ 0.24
TUBB3-213ENST00000557262 POLR2EP19388 210 aaKnown RBP16.52■□□□□ 0.24
TUBB3-213ENST00000557262 SLC6A4P31645 630 aa16.52■□□□□ 0.24
TUBB3-213ENST00000557262 GPD2P43304 727 aa16.52■□□□□ 0.24
TUBB3-213ENST00000557262 RPL34P49207 117 aaKnown RBP16.52■□□□□ 0.24
TUBB3-213ENST00000557262 SGSHP51688 502 aa16.52■□□□□ 0.24
TUBB3-213ENST00000557262 MARSP56192 900 aaKnown RBP16.52■□□□□ 0.24
TUBB3-213ENST00000557262 STX17P56962 302 aa16.52■□□□□ 0.24
TUBB3-213ENST00000557262 PTPRNQ16849 979 aa16.52■□□□□ 0.24
TUBB3-213ENST00000557262 FAM124AQ86V42 546 aa16.52■□□□□ 0.24
TUBB3-213ENST00000557262 SCUBE3Q8IX30 993 aa16.52■□□□□ 0.24
TUBB3-213ENST00000557262 ZNF557Q8N988 423 aaPredicted RBP16.52■□□□□ 0.24
TUBB3-213ENST00000557262 KDF1Q8NAX2 398 aaPredicted RBP16.52■□□□□ 0.24
TUBB3-213ENST00000557262 DDX50Q9BQ39 737 aaKnown RBP16.52■□□□□ 0.24
TUBB3-213ENST00000557262 SRRTQ9BXP5 876 aaKnown RBP16.52■□□□□ 0.24
TUBB3-213ENST00000557262 PCED1AQ9H1Q7 454 aa16.52■□□□□ 0.24
TUBB3-213ENST00000557262 LHX5Q9H2C1 402 aa16.52■□□□□ 0.24
TUBB3-213ENST00000557262 FBRSQ9HAH7 460 aa16.52■□□□□ 0.24
TUBB3-213ENST00000557262 EIF2B4Q9UI10 523 aaKnown RBP16.52■□□□□ 0.24
TUBB3-213ENST00000557262 CNTN6Q9UQ52 1028 aa16.52■□□□□ 0.24
TUBB3-213ENST00000557262 CTNND2Q9UQB3 1225 aa16.52■□□□□ 0.24
TUBB3-213ENST00000557262 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.52■□□□□ 0.24
TUBB3-213ENST00000557262 ZFHX4Q86UP3 3567 aa16.52■□□□□ 0.24
TUBB3-213ENST00000557262 CACNA1EQ15878 2313 aa16.52■□□□□ 0.23
TUBB3-213ENST00000557262 BIN1O00499 593 aa16.51■□□□□ 0.23
TUBB3-213ENST00000557262 BCAT2O15382 392 aaPredicted RBP16.51■□□□□ 0.23
TUBB3-213ENST00000557262 HYAL3O43820 417 aaPredicted RBP16.51■□□□□ 0.23
TUBB3-213ENST00000557262 SH3BP5O60239 455 aa16.51■□□□□ 0.23
TUBB3-213ENST00000557262 AFPP02771 609 aaKnown RBP16.51■□□□□ 0.23
TUBB3-213ENST00000557262 FYNP06241 537 aa16.51■□□□□ 0.23
TUBB3-213ENST00000557262 CD70P32970 193 aa16.51■□□□□ 0.23
TUBB3-213ENST00000557262 ACADSBP45954 432 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms