RNA–Protein interactions for RNA: ENST00000556916.5

FOXN3-213, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-213ENST00000556916 CXorf57Q6NSI4 855 aaKnown RBP4.09□□□□□ -1.75
FOXN3-213ENST00000556916 TLDC1Q6P9B6 456 aa4.09□□□□□ -1.75
FOXN3-213ENST00000556916 VWA1Q6PCB0 445 aa4.09□□□□□ -1.75
FOXN3-213ENST00000556916 TMED8Q6PL24 325 aaPredicted RBP4.09□□□□□ -1.75
FOXN3-213ENST00000556916 NPNTQ6UXI9 565 aa4.09□□□□□ -1.75
FOXN3-213ENST00000556916 FAM43BQ6ZT52 329 aaPredicted RBP4.09□□□□□ -1.75
FOXN3-213ENST00000556916 TOGARAM2Q6ZUX3 1019 aa4.09□□□□□ -1.75
FOXN3-213ENST00000556916 PTF1AQ7RTS3 328 aa4.09□□□□□ -1.75
FOXN3-213ENST00000556916 USP37Q86T82 979 aa4.09□□□□□ -1.75
FOXN3-213ENST00000556916 PDSS2Q86YH6 399 aa4.09□□□□□ -1.75
FOXN3-213ENST00000556916 TCEAL8Q8IYN2 117 aa4.09□□□□□ -1.75
FOXN3-213ENST00000556916 MYO1HQ8N1T3 1032 aa4.09□□□□□ -1.75
FOXN3-213ENST00000556916 CLASRPQ8N2M8 674 aaKnown RBP4.09□□□□□ -1.75
FOXN3-213ENST00000556916 SLC35F6Q8N357 371 aa4.09□□□□□ -1.75
FOXN3-213ENST00000556916 FAM46DQ8NEK8 389 aa4.09□□□□□ -1.75
FOXN3-213ENST00000556916 CCDC26Q8TAB7 109 aa4.09□□□□□ -1.75
FOXN3-213ENST00000556916 SLC30A5Q8TAD4 765 aa4.09□□□□□ -1.75
FOXN3-213ENST00000556916 SCAMP4Q969E2 229 aa4.09□□□□□ -1.75
FOXN3-213ENST00000556916 SAAL1Q96ER3 474 aa4.09□□□□□ -1.75
FOXN3-213ENST00000556916 CCDC51Q96ER9 411 aa4.09□□□□□ -1.75
FOXN3-213ENST00000556916 FBXL20Q96IG2 436 aa4.09□□□□□ -1.75
FOXN3-213ENST00000556916 CDK5RAP3Q96JB5 506 aa4.09□□□□□ -1.75
FOXN3-213ENST00000556916 MRGPRX1Q96LB2 322 aa4.09□□□□□ -1.75
FOXN3-213ENST00000556916 NEK1Q96PY6 1258 aa4.09□□□□□ -1.75
FOXN3-213ENST00000556916 USP28Q96RU2 1077 aa4.09□□□□□ -1.75
FOXN3-213ENST00000556916 RUFY1Q96T51 708 aa4.09□□□□□ -1.75
FOXN3-213ENST00000556916 PSMD1Q99460 953 aa4.09□□□□□ -1.75
FOXN3-213ENST00000556916 P2RX7Q99572 595 aaKnown RBP4.09□□□□□ -1.75
FOXN3-213ENST00000556916 C1QTNF7Q9BXJ2 289 aa4.09□□□□□ -1.75
FOXN3-213ENST00000556916 TINAGL1Q9GZM7 467 aaPredicted RBP4.09□□□□□ -1.75
FOXN3-213ENST00000556916 ZMAT3Q9HA38 289 aaKnown RBP4.09□□□□□ -1.75
FOXN3-213ENST00000556916 IL1RAPL2Q9NP60 686 aa4.09□□□□□ -1.75
FOXN3-213ENST00000556916 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.09□□□□□ -1.75
FOXN3-213ENST00000556916 ECHDC1Q9NTX5 307 aa4.09□□□□□ -1.75
FOXN3-213ENST00000556916 ZNF70Q9UC06 446 aaPredicted RBP4.09□□□□□ -1.75
FOXN3-213ENST00000556916 TCEAL9Q9UHQ7 104 aa4.09□□□□□ -1.75
FOXN3-213ENST00000556916 CEMIPQ8WUJ3 1361 aa4.09□□□□□ -1.75
FOXN3-213ENST00000556916 JCADQ9P266 1359 aa4.09□□□□□ -1.75
FOXN3-213ENST00000556916 LAMB4A4D0S4 1761 aa4.09□□□□□ -1.76
FOXN3-213ENST00000556916 CCDC88AQ3V6T2 1871 aa4.09□□□□□ -1.76
FOXN3-213ENST00000556916 A0A088AWK7 358 aa4.08□□□□□ -1.76
FOXN3-213ENST00000556916 PRAMEF33A0A0G2JMD5 474 aa4.08□□□□□ -1.76
FOXN3-213ENST00000556916 OVOS2A0A0G2JMS6 1433 aa4.08□□□□□ -1.76
FOXN3-213ENST00000556916 OVOS2A0A0J9YW53 1432 aa4.08□□□□□ -1.76
FOXN3-213ENST00000556916 CCDC195A0A1B0GUA6 201 aa4.08□□□□□ -1.76
FOXN3-213ENST00000556916 PIK3C2AO00443 1686 aa4.08□□□□□ -1.76
FOXN3-213ENST00000556916 TOR1BO14657 336 aa4.08□□□□□ -1.76
FOXN3-213ENST00000556916 KIF3BO15066 747 aa4.08□□□□□ -1.76
FOXN3-213ENST00000556916 SPTLC2O15270 562 aa4.08□□□□□ -1.76
FOXN3-213ENST00000556916 GRIN2DO15399 1336 aa4.08□□□□□ -1.76
FOXN3-213ENST00000556916 PROM1O43490 865 aa4.08□□□□□ -1.76
FOXN3-213ENST00000556916 PRAMEF10O60809 474 aa4.08□□□□□ -1.76
FOXN3-213ENST00000556916 HSF2BPO75031 334 aa4.08□□□□□ -1.76
FOXN3-213ENST00000556916 TUSC2O75896 110 aa4.08□□□□□ -1.76
FOXN3-213ENST00000556916 SRGNP10124 158 aa4.08□□□□□ -1.76
FOXN3-213ENST00000556916 KITP10721 976 aa4.08□□□□□ -1.76
FOXN3-213ENST00000556916 ATP1A3P13637 1013 aa4.08□□□□□ -1.76
FOXN3-213ENST00000556916 PECAM1P16284 738 aaPredicted RBP4.08□□□□□ -1.76
FOXN3-213ENST00000556916 WT1P19544 449 aaPredicted RBP4.08□□□□□ -1.76
FOXN3-213ENST00000556916 CMA1P23946 247 aa4.08□□□□□ -1.76
FOXN3-213ENST00000556916 GRIA3P42263 894 aa4.08□□□□□ -1.76
FOXN3-213ENST00000556916 NDUFA8P51970 172 aa4.08□□□□□ -1.76
FOXN3-213ENST00000556916 NAP1L1P55209 391 aaKnown RBP4.08□□□□□ -1.76
FOXN3-213ENST00000556916 KRTAP10-9P60411 292 aa4.08□□□□□ -1.76
FOXN3-213ENST00000556916 CRB1P82279 1406 aa4.08□□□□□ -1.76
FOXN3-213ENST00000556916 AKAP17AQ02040 695 aaKnown RBP4.08□□□□□ -1.76
FOXN3-213ENST00000556916 FPGSQ05932 587 aa4.08□□□□□ -1.76
FOXN3-213ENST00000556916 DYRK1AQ13627 763 aa4.08□□□□□ -1.76
FOXN3-213ENST00000556916 NAA25Q14CX7 972 aa4.08□□□□□ -1.76
FOXN3-213ENST00000556916 TXNRD1Q16881 649 aa4.08□□□□□ -1.76
FOXN3-213ENST00000556916 CCDC38Q502W7 563 aa4.08□□□□□ -1.76
FOXN3-213ENST00000556916 ERCC6L2Q5T890 1561 aa4.08□□□□□ -1.76
FOXN3-213ENST00000556916 NXNQ6DKJ4 435 aa4.08□□□□□ -1.76
FOXN3-213ENST00000556916 TTC19Q6DKK2 380 aaPredicted RBP4.08□□□□□ -1.76
FOXN3-213ENST00000556916 OVOS2Q6IE36 1432 aa4.08□□□□□ -1.76
FOXN3-213ENST00000556916 TAF2Q6P1X5 1199 aa4.08□□□□□ -1.76
FOXN3-213ENST00000556916 EDC4Q6P2E9 1401 aaKnown RBP4.08□□□□□ -1.76
FOXN3-213ENST00000556916 SYNE3Q6ZMZ3 975 aa4.08□□□□□ -1.76
FOXN3-213ENST00000556916 CCDC121Q6ZUS5 278 aa4.08□□□□□ -1.76
FOXN3-213ENST00000556916 G2E3Q7L622 706 aa4.08□□□□□ -1.76
FOXN3-213ENST00000556916 RASGRP2Q7LDG7 609 aa4.08□□□□□ -1.76
FOXN3-213ENST00000556916 PPP1R42Q7Z4L9 355 aa4.08□□□□□ -1.76
FOXN3-213ENST00000556916 CLNKQ7Z7G1 428 aa4.08□□□□□ -1.76
FOXN3-213ENST00000556916 CEP57Q86XR8 500 aa4.08□□□□□ -1.76
FOXN3-213ENST00000556916 TMTC1Q8IUR5 882 aa4.08□□□□□ -1.76
FOXN3-213ENST00000556916 APLFQ8IW19 511 aaPredicted RBP4.08□□□□□ -1.76
FOXN3-213ENST00000556916 WDR75Q8IWA0 830 aaKnown RBP4.08□□□□□ -1.76
FOXN3-213ENST00000556916 ADGRG5Q8IZF4 528 aa4.08□□□□□ -1.76
FOXN3-213ENST00000556916 LINC00301Q8NCQ3 95 aa4.08□□□□□ -1.76
FOXN3-213ENST00000556916 PSD4Q8NDX1 1056 aa4.08□□□□□ -1.76
FOXN3-213ENST00000556916 TOR1AIP2Q8NFQ8 470 aa4.08□□□□□ -1.76
FOXN3-213ENST00000556916 POC1BQ8TC44 478 aa4.08□□□□□ -1.76
FOXN3-213ENST00000556916 HASPINQ8TF76 798 aa4.08□□□□□ -1.76
FOXN3-213ENST00000556916 LPIN2Q92539 896 aa4.08□□□□□ -1.76
FOXN3-213ENST00000556916 P3H4Q92791 437 aa4.08□□□□□ -1.76
FOXN3-213ENST00000556916 CCDC47Q96A33 483 aaKnown RBP4.08□□□□□ -1.76
FOXN3-213ENST00000556916 CCDC114Q96M63 670 aa4.08□□□□□ -1.76
FOXN3-213ENST00000556916 TIMP4Q99727 224 aa4.08□□□□□ -1.76
FOXN3-213ENST00000556916 SMOQ99835 787 aa4.08□□□□□ -1.76
FOXN3-213ENST00000556916 SH3GL2Q99962 352 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms