RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 TMEM40Q8WWA1 233 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 INPP5DQ92835 1189 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 MYDGFQ969H8 173 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 GJA10Q969M2 543 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 LRRC39Q96DD0 335 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 ANAPC16Q96DE5 110 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 ZDHHC12Q96GR4 267 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 PHACTR3Q96KR7 559 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 ASB2Q96Q27 587 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 RIT2Q99578 217 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 CCM2Q9BSQ5 444 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 FUCA2Q9BTY2 467 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 SARGQ9BW04 601 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 TRIM55Q9BYV6 548 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 ACPTQ9BZG2 426 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 POLR1EQ9GZS1 481 aaKnown RBP6.39□□□□□ -1.39
TDP1-215ENST00000556498 PAIP1Q9H074 479 aaKnown RBP6.39□□□□□ -1.39
TDP1-215ENST00000556498 C2orf40Q9H1Z8 148 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 SEMA6CQ9H3T2 930 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 PLEKHA4Q9H4M7 779 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 SP110Q9HB58 689 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 RC3H2Q9HBD1 1191 aaKnown RBP6.39□□□□□ -1.39
TDP1-215ENST00000556498 SSU72Q9NP77 194 aaKnown RBP6.39□□□□□ -1.39
TDP1-215ENST00000556498 RPRD1BQ9NQG5 326 aaKnown RBP6.39□□□□□ -1.39
TDP1-215ENST00000556498 C1orf112Q9NSG2 853 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 C20orf96Q9NUD7 363 aaPredicted RBP6.39□□□□□ -1.39
TDP1-215ENST00000556498 NUDT15Q9NV35 164 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 GDAP2Q9NXN4 497 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 TRPS1Q9UHF7 1281 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 MBD1Q9UIS9 605 aaPredicted RBP6.39□□□□□ -1.39
TDP1-215ENST00000556498 RCOR1Q9UKL0 485 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 RNF112Q9ULX5 631 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 SPATA2Q9UM82 520 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 PTCH2Q9Y6C5 1203 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 FHOD3Q2V2M9 1422 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 CASKIN1Q8WXD9 1431 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 ATP10AO60312 1499 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 FYCO1Q9BQS8 1478 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 A0A1B0GTQ1 180 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 FAM172BPA6NC97 362 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 UPK3BL1B0FP48 263 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 UPK3BL2E5RIL1 263 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 H7C0S8 307 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 RASGRF2O14827 1237 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 PCDH17O14917 1159 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 THAP12O43422 761 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 KRT86O43790 486 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 HSF2BPO75031 334 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 NOS1APO75052 506 aaPredicted RBP6.38□□□□□ -1.39
TDP1-215ENST00000556498 CDC123O75794 336 aaPredicted RBP6.38□□□□□ -1.39
TDP1-215ENST00000556498 SUN1O94901 812 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 BMP10O95393 424 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 PLATP00750 562 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 QDPRP09417 244 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 FAM228BP0C875 321 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 SLC2A3P11169 496 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 HSD3B1P14060 373 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 VAV1P15498 845 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 RAB4AP20338 218 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 RAB6AP20340 208 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 MAP4P27816 1152 aaKnown RBP6.38□□□□□ -1.39
TDP1-215ENST00000556498 GATA4P43694 442 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 DIO1P49895 249 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 HNMTP50135 292 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 BCAP31P51572 246 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 ZNF135P52742 658 aaPredicted RBP6.38□□□□□ -1.39
TDP1-215ENST00000556498 AP2S1P53680 142 aaPredicted RBP6.38□□□□□ -1.39
TDP1-215ENST00000556498 CACNA2D1P54289 1103 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 AIF1P55008 147 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 RPS3AP61247 264 aaKnown RBP6.38□□□□□ -1.39
TDP1-215ENST00000556498 UBE2HP62256 183 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 MRPS5P82675 430 aaKnown RBP6.38□□□□□ -1.39
TDP1-215ENST00000556498 MPP1Q00013 466 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 SSRP1Q08945 709 aaKnown RBP6.38□□□□□ -1.39
TDP1-215ENST00000556498 BFSP1Q12934 665 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 DUSP4Q13115 394 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 CAPRIN1Q14444 709 aaKnown RBP6.38□□□□□ -1.39
TDP1-215ENST00000556498 RFTN1Q14699 578 aaPredicted RBP6.38□□□□□ -1.39
TDP1-215ENST00000556498 PTGISQ16647 500 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 AAK1Q2M2I8 961 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 FAM209BQ5JX69 171 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 CDCP2Q5VXM1 449 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 KRT40Q6A162 431 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 PTRHD1Q6GMV3 140 aaKnown RBP6.38□□□□□ -1.39
TDP1-215ENST00000556498 RETSATQ6NUM9 610 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 PRMT9Q6P2P2 845 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 CNNM4Q6P4Q7 775 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 IYDQ6PHW0 289 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 KDM7AQ6ZMT4 941 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 TPGS1Q6ZTW0 290 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 FRA10AC1Q70Z53 315 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 ENOSF1Q7L5Y1 443 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 HDDC2Q7Z4H3 204 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 ZNF227Q86WZ6 799 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 LSRQ86X29 649 aaPredicted RBP6.38□□□□□ -1.39
TDP1-215ENST00000556498 SFR1Q86XK3 245 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 CDKL3Q8IVW4 592 aaPredicted RBP6.38□□□□□ -1.39
TDP1-215ENST00000556498 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.38□□□□□ -1.39
TDP1-215ENST00000556498 ELMOD2Q8IZ81 293 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 ARHGAP24Q8N264 748 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms