RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 ATF6P18850 670 aa9.63□□□□□ -0.87
GTF2A1-204ENST00000556268 ERCC5P28715 1186 aaPredicted RBP9.63□□□□□ -0.87
GTF2A1-204ENST00000556268 CDC25CP30307 473 aa9.63□□□□□ -0.87
GTF2A1-204ENST00000556268 MCM2P49736 904 aa9.63□□□□□ -0.87
GTF2A1-204ENST00000556268 RUNX3Q13761 415 aa9.63□□□□□ -0.87
GTF2A1-204ENST00000556268 PTPAQ15257 358 aa9.63□□□□□ -0.87
GTF2A1-204ENST00000556268 SLC14A2Q15849 920 aa9.63□□□□□ -0.87
GTF2A1-204ENST00000556268 RILPL1Q5EBL4 403 aa9.63□□□□□ -0.87
GTF2A1-204ENST00000556268 N4BP2L1Q5TBK1 243 aaPredicted RBP9.63□□□□□ -0.87
GTF2A1-204ENST00000556268 JADE1Q6IE81 842 aa9.63□□□□□ -0.87
GTF2A1-204ENST00000556268 FSTL4Q6MZW2 842 aa9.63□□□□□ -0.87
GTF2A1-204ENST00000556268 PKN3Q6P5Z2 889 aa9.63□□□□□ -0.87
GTF2A1-204ENST00000556268 KBTBD6Q86V97 674 aa9.63□□□□□ -0.87
GTF2A1-204ENST00000556268 IRF2BP1Q8IU81 584 aa9.63□□□□□ -0.87
GTF2A1-204ENST00000556268 BHLHE22Q8NFJ8 381 aaPredicted RBP9.63□□□□□ -0.87
GTF2A1-204ENST00000556268 USP13Q92995 863 aaPredicted RBP9.63□□□□□ -0.87
GTF2A1-204ENST00000556268 PLIN2Q99541 437 aa9.63□□□□□ -0.87
GTF2A1-204ENST00000556268 ARRDC1-AS1Q9H2J1 176 aa9.63□□□□□ -0.87
GTF2A1-204ENST00000556268 ASB7Q9H672 318 aa9.63□□□□□ -0.87
GTF2A1-204ENST00000556268 FBRSL1Q9HCM7 1045 aaKnown RBP9.63□□□□□ -0.87
GTF2A1-204ENST00000556268 RXFP3Q9NSD7 469 aa9.63□□□□□ -0.87
GTF2A1-204ENST00000556268 AP5S1Q9NUS5 200 aa9.63□□□□□ -0.87
GTF2A1-204ENST00000556268 PCDHB10Q9UN67 800 aa9.63□□□□□ -0.87
GTF2A1-204ENST00000556268 C2CD2Q9Y426 696 aa9.63□□□□□ -0.87
GTF2A1-204ENST00000556268 PCDHGA5Q9Y5G8 931 aa9.63□□□□□ -0.87
GTF2A1-204ENST00000556268 RALGAPA1Q6GYQ0 2036 aa9.62□□□□□ -0.87
GTF2A1-204ENST00000556268 ANKRD63C9JTQ0 380 aa9.62□□□□□ -0.87
GTF2A1-204ENST00000556268 EPN2O95208 641 aa9.62□□□□□ -0.87
GTF2A1-204ENST00000556268 TCF3P15923 654 aa9.62□□□□□ -0.87
GTF2A1-204ENST00000556268 ENDOUP21128 410 aaKnown RBP9.62□□□□□ -0.87
GTF2A1-204ENST00000556268 DDX6P26196 483 aaKnown RBP eCLIP9.62□□□□□ -0.875e-6■■■■■ 46.6
GTF2A1-204ENST00000556268 MATR3P43243 847 aaKnown RBP eCLIP9.62□□□□□ -0.87
GTF2A1-204ENST00000556268 LIG4P49917 911 aa9.62□□□□□ -0.87
GTF2A1-204ENST00000556268 ZNF268Q14587 947 aaPredicted RBP9.62□□□□□ -0.87
GTF2A1-204ENST00000556268 SF3A2Q15428 464 aaKnown RBP9.62□□□□□ -0.87
GTF2A1-204ENST00000556268 SLC39A12Q504Y0 691 aa9.62□□□□□ -0.87
GTF2A1-204ENST00000556268 CRELD2Q6UXH1 353 aaPredicted RBP9.62□□□□□ -0.87
GTF2A1-204ENST00000556268 CEP68Q76N32 757 aa9.62□□□□□ -0.87
GTF2A1-204ENST00000556268 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.62□□□□□ -0.87
GTF2A1-204ENST00000556268 MON1AQ86VX9 555 aa9.62□□□□□ -0.87
GTF2A1-204ENST00000556268 THEM5Q8N1Q8 247 aa9.62□□□□□ -0.87
GTF2A1-204ENST00000556268 FAM169BQ8N8A8 192 aa9.62□□□□□ -0.87
GTF2A1-204ENST00000556268 SPPL2BQ8TCT7 592 aa9.62□□□□□ -0.87
GTF2A1-204ENST00000556268 AK8Q96MA6 479 aa9.62□□□□□ -0.87
GTF2A1-204ENST00000556268 REEP2Q9BRK0 252 aa9.62□□□□□ -0.87
GTF2A1-204ENST00000556268 LSM14BQ9BX40 385 aaKnown RBP9.62□□□□□ -0.87
GTF2A1-204ENST00000556268 SLC12A9Q9BXP2 914 aa9.62□□□□□ -0.87
GTF2A1-204ENST00000556268 ST6GALNAC4Q9H4F1 302 aa9.62□□□□□ -0.87
GTF2A1-204ENST00000556268 BLOC1S4Q9NUP1 217 aa9.62□□□□□ -0.87
GTF2A1-204ENST00000556268 TNFRSF10DQ9UBN6 386 aa9.62□□□□□ -0.87
GTF2A1-204ENST00000556268 FADS2P1A8MWK0 482 aa9.61□□□□□ -0.87
GTF2A1-204ENST00000556268 HNRNPDLO14979 420 aaKnown RBP9.61□□□□□ -0.87
GTF2A1-204ENST00000556268 RPP40O75818 363 aaKnown RBP9.61□□□□□ -0.87
GTF2A1-204ENST00000556268 TSPAN15O95858 294 aa9.61□□□□□ -0.87
GTF2A1-204ENST00000556268 DRD1P21728 446 aa9.61□□□□□ -0.87
GTF2A1-204ENST00000556268 ABCD1P33897 745 aa9.61□□□□□ -0.87
GTF2A1-204ENST00000556268 CYP4F8P98187 520 aa9.61□□□□□ -0.87
GTF2A1-204ENST00000556268 AMPD2Q01433 879 aa9.61□□□□□ -0.87
GTF2A1-204ENST00000556268 GRSF1Q12849 480 aaKnown RBP eCLIP9.61□□□□□ -0.87
GTF2A1-204ENST00000556268 TMEM132DQ14C87 1099 aa9.61□□□□□ -0.87
GTF2A1-204ENST00000556268 ZRSR1Q15695 479 aaKnown RBP9.61□□□□□ -0.87
GTF2A1-204ENST00000556268 PPP2R5EQ16537 467 aa9.61□□□□□ -0.87
GTF2A1-204ENST00000556268 MGAT5BQ3V5L5 792 aa9.61□□□□□ -0.87
GTF2A1-204ENST00000556268 STPG1Q5TH74 334 aa9.61□□□□□ -0.87
GTF2A1-204ENST00000556268 WSCD1Q658N2 575 aa9.61□□□□□ -0.87
GTF2A1-204ENST00000556268 IL31Q6EBC2 164 aa9.61□□□□□ -0.87
GTF2A1-204ENST00000556268 MYCT1Q8N699 235 aa9.61□□□□□ -0.87
GTF2A1-204ENST00000556268 BICD1Q96G01 975 aa9.61□□□□□ -0.87
GTF2A1-204ENST00000556268 PLCD4Q9BRC7 762 aa9.61□□□□□ -0.87
GTF2A1-204ENST00000556268 MSTO1Q9BUK6 570 aa9.61□□□□□ -0.87
GTF2A1-204ENST00000556268 STRA6Q9BX79 667 aa9.61□□□□□ -0.87
GTF2A1-204ENST00000556268 EBF3Q9H4W6 596 aa9.61□□□□□ -0.87
GTF2A1-204ENST00000556268 NOL6Q9H6R4 1146 aaKnown RBP9.61□□□□□ -0.87
GTF2A1-204ENST00000556268 PARVGQ9HBI0 331 aa9.61□□□□□ -0.87
GTF2A1-204ENST00000556268 TDP1Q9NUW8 608 aa9.61□□□□□ -0.87
GTF2A1-204ENST00000556268 TMLHEQ9NVH6 421 aa9.61□□□□□ -0.87
GTF2A1-204ENST00000556268 DPP3Q9NY33 737 aa9.61□□□□□ -0.87
GTF2A1-204ENST00000556268 ANGPTL2Q9UKU9 493 aa9.61□□□□□ -0.87
GTF2A1-204ENST00000556268 STRIP2Q9ULQ0 834 aa9.61□□□□□ -0.87
GTF2A1-204ENST00000556268 CCL26Q9Y258 94 aa9.61□□□□□ -0.87
GTF2A1-204ENST00000556268 PDCD11Q14690 1871 aaKnown RBP9.61□□□□□ -0.87
GTF2A1-204ENST00000556268 VWA3AA6NCI4 1184 aa9.6□□□□□ -0.87
GTF2A1-204ENST00000556268 KPNA7A9QM74 516 aa9.6□□□□□ -0.87
GTF2A1-204ENST00000556268 KCNK5O95279 499 aa9.6□□□□□ -0.87
GTF2A1-204ENST00000556268 EGFP01133 1207 aa9.6□□□□□ -0.87
GTF2A1-204ENST00000556268 ADSSP30520 456 aa9.6□□□□□ -0.87
GTF2A1-204ENST00000556268 GJA4P35212 333 aa9.6□□□□□ -0.87
GTF2A1-204ENST00000556268 DDIT3P35638 169 aa9.6□□□□□ -0.87
GTF2A1-204ENST00000556268 PXNP49023 591 aaPredicted RBP9.6□□□□□ -0.87
GTF2A1-204ENST00000556268 ACOT2P49753 483 aa9.6□□□□□ -0.87
GTF2A1-204ENST00000556268 TAF6P49848 677 aa9.6□□□□□ -0.87
GTF2A1-204ENST00000556268 VEPH1Q14D04 833 aa9.6□□□□□ -0.87
GTF2A1-204ENST00000556268 PDGFRLQ15198 375 aa9.6□□□□□ -0.87
GTF2A1-204ENST00000556268 PLK5Q496M5 336 aa9.6□□□□□ -0.87
GTF2A1-204ENST00000556268 FBXO43Q4G163 708 aa9.6□□□□□ -0.87
GTF2A1-204ENST00000556268 TXNDC8Q6A555 127 aa9.6□□□□□ -0.87
GTF2A1-204ENST00000556268 TRIM68Q6AZZ1 485 aa9.6□□□□□ -0.87
GTF2A1-204ENST00000556268 SLFN12LQ6IEE8 588 aa9.6□□□□□ -0.87
GTF2A1-204ENST00000556268 SYT13Q7L8C5 426 aa9.6□□□□□ -0.87
GTF2A1-204ENST00000556268 ZNF720Q7Z2F6 126 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms