RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 SEMG2Q02383 582 aa9.58□□□□□ -0.88
PRKCH-218ENST00000555628 IFRD2Q12894 506 aaPredicted RBP9.58□□□□□ -0.88
PRKCH-218ENST00000555628 TARDBPQ13148 414 aaKnown RBP eCLIP9.58□□□□□ -0.88
PRKCH-218ENST00000555628 ORC1Q13415 861 aa9.58□□□□□ -0.88
PRKCH-218ENST00000555628 CAMK2GQ13555 558 aaPredicted RBP9.58□□□□□ -0.88
PRKCH-218ENST00000555628 ZNF234Q14588 700 aa9.58□□□□□ -0.88
PRKCH-218ENST00000555628 STARD3Q14849 445 aa9.58□□□□□ -0.88
PRKCH-218ENST00000555628 SUZ12Q15022 739 aaKnown RBP9.58□□□□□ -0.88
PRKCH-218ENST00000555628 KLHDC10Q6PID8 442 aa9.58□□□□□ -0.88
PRKCH-218ENST00000555628 TPGS1Q6ZTW0 290 aa9.58□□□□□ -0.88
PRKCH-218ENST00000555628 USP49Q70CQ1 688 aa9.58□□□□□ -0.88
PRKCH-218ENST00000555628 HS2ST1Q7LGA3 356 aa9.58□□□□□ -0.88
PRKCH-218ENST00000555628 TRAPPC11Q7Z392 1133 aa9.58□□□□□ -0.88
PRKCH-218ENST00000555628 WDR49Q8IV35 697 aa9.58□□□□□ -0.88
PRKCH-218ENST00000555628 FUKQ8N0W3 1084 aa9.58□□□□□ -0.88
PRKCH-218ENST00000555628 CACTIN-AS1Q8N1I8 211 aa9.58□□□□□ -0.88
PRKCH-218ENST00000555628 DEPDC4Q8N2C3 294 aa9.58□□□□□ -0.88
PRKCH-218ENST00000555628 SNRNP27Q8WVK2 155 aaKnown RBP9.58□□□□□ -0.88
PRKCH-218ENST00000555628 NANOS1Q8WY41 292 aaKnown RBP9.58□□□□□ -0.88
PRKCH-218ENST00000555628 RFFLQ8WZ73 363 aa9.58□□□□□ -0.88
PRKCH-218ENST00000555628 TTC9Q92623 222 aa9.58□□□□□ -0.88
PRKCH-218ENST00000555628 BIRC7Q96CA5 298 aa9.58□□□□□ -0.88
PRKCH-218ENST00000555628 SIPA1Q96FS4 1042 aa9.58□□□□□ -0.88
PRKCH-218ENST00000555628 ANKRD36BP1Q96IX9 119 aa9.58□□□□□ -0.88
PRKCH-218ENST00000555628 XPO6Q96QU8 1125 aaKnown RBP9.58□□□□□ -0.88
PRKCH-218ENST00000555628 SMOQ99835 787 aa9.58□□□□□ -0.88
PRKCH-218ENST00000555628 CLMPQ9H6B4 373 aa9.58□□□□□ -0.88
PRKCH-218ENST00000555628 CSNK1G1Q9HCP0 422 aa9.58□□□□□ -0.88
PRKCH-218ENST00000555628 DMAP1Q9NPF5 467 aaPredicted RBP9.58□□□□□ -0.88
PRKCH-218ENST00000555628 COMMD8Q9NX08 183 aa9.58□□□□□ -0.88
PRKCH-218ENST00000555628 FTSJ1Q9UET6 329 aa9.58□□□□□ -0.88
PRKCH-218ENST00000555628 CLEC4EQ9ULY5 219 aa9.58□□□□□ -0.88
PRKCH-218ENST00000555628 SPENQ96T58 3664 aaKnown RBP9.58□□□□□ -0.88
PRKCH-218ENST00000555628 CAPN8A6NHC0 703 aa9.57□□□□□ -0.88
PRKCH-218ENST00000555628 HHLA1C9JL84 531 aa9.57□□□□□ -0.88
PRKCH-218ENST00000555628 ENC1O14682 589 aa9.57□□□□□ -0.88
PRKCH-218ENST00000555628 ARHGAP6O43182 974 aa9.57□□□□□ -0.88
PRKCH-218ENST00000555628 BRINP1O60477 761 aa9.57□□□□□ -0.88
PRKCH-218ENST00000555628 STC2O76061 302 aa9.57□□□□□ -0.88
PRKCH-218ENST00000555628 KRT18P05783 430 aaKnown RBP9.57□□□□□ -0.88
PRKCH-218ENST00000555628 IGHV4-34P06331 123 aa9.57□□□□□ -0.88
PRKCH-218ENST00000555628 C1SP09871 688 aa9.57□□□□□ -0.88
PRKCH-218ENST00000555628 UBA7P41226 1012 aa9.57□□□□□ -0.88
PRKCH-218ENST00000555628 IL9RQ01113 521 aa9.57□□□□□ -0.88
PRKCH-218ENST00000555628 DNAJC3Q13217 504 aa9.57□□□□□ -0.88
PRKCH-218ENST00000555628 SF3A1Q15459 793 aaKnown RBP9.57□□□□□ -0.88
PRKCH-218ENST00000555628 DUOXA2Q1HG44 320 aa9.57□□□□□ -0.88
PRKCH-218ENST00000555628 TBC1D25Q3MII6 688 aa9.57□□□□□ -0.88
PRKCH-218ENST00000555628 HES3Q5TGS1 186 aa9.57□□□□□ -0.88
PRKCH-218ENST00000555628 GPRIN1Q7Z2K8 1008 aa9.57□□□□□ -0.88
PRKCH-218ENST00000555628 KANSL1Q7Z3B3 1105 aa9.57□□□□□ -0.88
PRKCH-218ENST00000555628 FMNL3Q8IVF7 1028 aa9.57□□□□□ -0.88
PRKCH-218ENST00000555628 GPD1LQ8N335 351 aa9.57□□□□□ -0.88
PRKCH-218ENST00000555628 SAP25Q8TEE9 199 aa9.57□□□□□ -0.88
PRKCH-218ENST00000555628 PRCCQ92733 491 aaPredicted RBP9.57□□□□□ -0.88
PRKCH-218ENST00000555628 CALML4Q96GE6 196 aa9.57□□□□□ -0.88
PRKCH-218ENST00000555628 HIC2Q96JB3 615 aa9.57□□□□□ -0.88
PRKCH-218ENST00000555628 TMEM245Q9H330 911 aa9.57□□□□□ -0.88
PRKCH-218ENST00000555628 PCIF1Q9H4Z3 704 aa9.57□□□□□ -0.88
PRKCH-218ENST00000555628 VRTNQ9H8Y1 702 aa9.57□□□□□ -0.88
PRKCH-218ENST00000555628 MRPL44Q9H9J2 332 aaKnown RBP9.57□□□□□ -0.88
PRKCH-218ENST00000555628 NMUR1Q9HB89 426 aa9.57□□□□□ -0.88
PRKCH-218ENST00000555628 PLK2Q9NYY3 685 aa9.57□□□□□ -0.88
PRKCH-218ENST00000555628 EXOC7Q9UPT5 735 aa9.57□□□□□ -0.88
PRKCH-218ENST00000555628 PCDHGA11Q9Y5H2 935 aa9.57□□□□□ -0.88
PRKCH-218ENST00000555628 DOPEY2Q9Y3R5 2298 aa9.57□□□□□ -0.88
PRKCH-218ENST00000555628 PYCARD-AS1I3L0S3 204 aa9.56□□□□□ -0.88
PRKCH-218ENST00000555628 CAPN9O14815 690 aa9.56□□□□□ -0.88
PRKCH-218ENST00000555628 VILLO15195 856 aa9.56□□□□□ -0.88
PRKCH-218ENST00000555628 RRP8O43159 456 aaKnown RBP9.56□□□□□ -0.88
PRKCH-218ENST00000555628 RFPL3O75679 317 aa9.56□□□□□ -0.88
PRKCH-218ENST00000555628 WNT1P04628 370 aa9.56□□□□□ -0.88
PRKCH-218ENST00000555628 GAP43P17677 238 aa9.56□□□□□ -0.88
PRKCH-218ENST00000555628 CD27P26842 260 aa9.56□□□□□ -0.88
PRKCH-218ENST00000555628 HNF1BP35680 557 aa9.56□□□□□ -0.88
PRKCH-218ENST00000555628 LONP1P36776 959 aaKnown RBP9.56□□□□□ -0.88
PRKCH-218ENST00000555628 EIF4HQ15056 248 aaKnown RBP9.56□□□□□ -0.88
PRKCH-218ENST00000555628 CCDC157Q569K6 752 aa9.56□□□□□ -0.88
PRKCH-218ENST00000555628 SFMBT2Q5VUG0 894 aa9.56□□□□□ -0.88
PRKCH-218ENST00000555628 LRRC69Q6ZNQ3 347 aa9.56□□□□□ -0.88
PRKCH-218ENST00000555628 CACUL1Q86Y37 369 aa9.56□□□□□ -0.88
PRKCH-218ENST00000555628 FAM217AQ8IXS0 508 aa9.56□□□□□ -0.88
PRKCH-218ENST00000555628 DCBLD1Q8N8Z6 715 aa9.56□□□□□ -0.88
PRKCH-218ENST00000555628 FAM184AQ8NB25 1140 aa9.56□□□□□ -0.88
PRKCH-218ENST00000555628 OR6B3Q8NGW1 331 aa9.56□□□□□ -0.88
PRKCH-218ENST00000555628 SORCS1Q8WY21 1168 aa9.56□□□□□ -0.88
PRKCH-218ENST00000555628 FGF11Q92914 225 aa9.56□□□□□ -0.88
PRKCH-218ENST00000555628 BHMTQ93088 406 aa9.56□□□□□ -0.88
PRKCH-218ENST00000555628 SMARCD1Q96GM5 515 aa9.56□□□□□ -0.88
PRKCH-218ENST00000555628 TMEM176AQ96HP8 235 aa9.56□□□□□ -0.88
PRKCH-218ENST00000555628 UCN2Q96RP3 112 aa9.56□□□□□ -0.88
PRKCH-218ENST00000555628 MMS19Q96T76 1030 aa9.56□□□□□ -0.88
PRKCH-218ENST00000555628 SDCBP2Q9H190 292 aa9.56□□□□□ -0.88
PRKCH-218ENST00000555628 SNX25Q9H3E2 840 aa9.56□□□□□ -0.88
PRKCH-218ENST00000555628 SMYD3Q9H7B4 428 aa9.56□□□□□ -0.88
PRKCH-218ENST00000555628 EBF2Q9HAK2 575 aa9.56□□□□□ -0.88
PRKCH-218ENST00000555628 KRT82Q9NSB4 513 aa9.56□□□□□ -0.88
PRKCH-218ENST00000555628 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.56□□□□□ -0.88
PRKCH-218ENST00000555628 ELOVL2Q9NXB9 296 aa9.56□□□□□ -0.88
PRKCH-218ENST00000555628 TBC1D7Q9P0N9 293 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms