RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.02■□□□□ 0.32
SPTLC2-203ENST00000554901 ADGRG2Q8IZP9 1017 aa17.02■□□□□ 0.32
SPTLC2-203ENST00000554901 CCDC185Q8N715 623 aa17.02■□□□□ 0.32
SPTLC2-203ENST00000554901 PRMT1Q99873 361 aaKnown RBP17.02■□□□□ 0.32
SPTLC2-203ENST00000554901 RPP25Q9BUL9 199 aaKnown RBP17.02■□□□□ 0.32
SPTLC2-203ENST00000554901 BRD9Q9H8M2 597 aa17.02■□□□□ 0.32
SPTLC2-203ENST00000554901 PCSK1NQ9UHG2 260 aa17.02■□□□□ 0.32
SPTLC2-203ENST00000554901 WNT6Q9Y6F9 365 aa17.02■□□□□ 0.32
SPTLC2-203ENST00000554901 KIF26AQ9ULI4 1882 aaPredicted RBP17.02■□□□□ 0.31
SPTLC2-203ENST00000554901 I6L893 689 aaPredicted RBP17.01■□□□□ 0.31
SPTLC2-203ENST00000554901 GFRA2O00451 464 aa17.01■□□□□ 0.31
SPTLC2-203ENST00000554901 GDI1P31150 447 aa17.01■□□□□ 0.31
SPTLC2-203ENST00000554901 L1CAMP32004 1257 aa17.01■□□□□ 0.31
SPTLC2-203ENST00000554901 GRM2Q14416 872 aa17.01■□□□□ 0.31
SPTLC2-203ENST00000554901 MPP7Q5T2T1 576 aa17.01■□□□□ 0.31
SPTLC2-203ENST00000554901 TTC39BQ5VTQ0 682 aaPredicted RBP17.01■□□□□ 0.31
SPTLC2-203ENST00000554901 CYP4V2Q6ZWL3 525 aaPredicted RBP17.01■□□□□ 0.31
SPTLC2-203ENST00000554901 RHOT1Q8IXI2 618 aa17.01■□□□□ 0.31
SPTLC2-203ENST00000554901 RSAD2Q8WXG1 361 aa17.01■□□□□ 0.31
SPTLC2-203ENST00000554901 PEBP4Q96S96 227 aa17.01■□□□□ 0.31
SPTLC2-203ENST00000554901 SNRNP25Q9BV90 132 aaKnown RBP17.01■□□□□ 0.31
SPTLC2-203ENST00000554901 RETREG1Q9H6L5 497 aa17.01■□□□□ 0.31
SPTLC2-203ENST00000554901 ANLNQ9NQW6 1124 aa17.01■□□□□ 0.31
SPTLC2-203ENST00000554901 SPHK2Q9NRA0 654 aa17.01■□□□□ 0.31
SPTLC2-203ENST00000554901 AP4E1Q9UPM8 1137 aa17.01■□□□□ 0.31
SPTLC2-203ENST00000554901 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.01■□□□□ 0.31
SPTLC2-203ENST00000554901 HS3ST4Q9Y661 456 aa17.01■□□□□ 0.31
SPTLC2-203ENST00000554901 CAPN6Q9Y6Q1 641 aa17.01■□□□□ 0.31
SPTLC2-203ENST00000554901 F5H5T6 163 aa17.01■□□□□ 0.31
SPTLC2-203ENST00000554901 ARNTLO00327 626 aa17.01■□□□□ 0.31
SPTLC2-203ENST00000554901 PSTPIP1O43586 416 aa17.01■□□□□ 0.31
SPTLC2-203ENST00000554901 PALMO75781 387 aa17.01■□□□□ 0.31
SPTLC2-203ENST00000554901 ADH1CP00326 375 aa17.01■□□□□ 0.31
SPTLC2-203ENST00000554901 CYBBP04839 570 aa17.01■□□□□ 0.31
SPTLC2-203ENST00000554901 TACR2P21452 398 aa17.01■□□□□ 0.31
SPTLC2-203ENST00000554901 MSNP26038 577 aaKnown RBP17.01■□□□□ 0.31
SPTLC2-203ENST00000554901 IL1R2P27930 398 aa17.01■□□□□ 0.31
SPTLC2-203ENST00000554901 SSR1P43307 286 aaKnown RBP17.01■□□□□ 0.31
SPTLC2-203ENST00000554901 PFKPQ01813 784 aa17.01■□□□□ 0.31
SPTLC2-203ENST00000554901 NR1H3Q13133 447 aa17.01■□□□□ 0.31
SPTLC2-203ENST00000554901 DPYSL2Q16555 572 aa17.01■□□□□ 0.31
SPTLC2-203ENST00000554901 C5orf22Q49AR2 442 aa17.01■□□□□ 0.31
SPTLC2-203ENST00000554901 MPPE1Q53F39 396 aa17.01■□□□□ 0.31
SPTLC2-203ENST00000554901 PIK3R6Q5UE93 754 aa17.01■□□□□ 0.31
SPTLC2-203ENST00000554901 NADSYN1Q6IA69 706 aa17.01■□□□□ 0.31
SPTLC2-203ENST00000554901 LRRC31Q6UY01 552 aa17.01■□□□□ 0.31
SPTLC2-203ENST00000554901 CHSY1Q86X52 802 aa17.01■□□□□ 0.31
SPTLC2-203ENST00000554901 CPA6Q8N4T0 437 aa17.01■□□□□ 0.31
SPTLC2-203ENST00000554901 DNASE1L2Q92874 299 aa17.01■□□□□ 0.31
SPTLC2-203ENST00000554901 LINC00597Q9H2U6 94 aa17.01■□□□□ 0.31
SPTLC2-203ENST00000554901 TRMT1Q9NXH9 659 aaKnown RBP17.01■□□□□ 0.31
SPTLC2-203ENST00000554901 MARK1Q9P0L2 795 aa17.01■□□□□ 0.31
SPTLC2-203ENST00000554901 OR12D3Q9UGF7 316 aa17.01■□□□□ 0.31
SPTLC2-203ENST00000554901 XPO7Q9UIA9 1087 aaKnown RBP17.01■□□□□ 0.31
SPTLC2-203ENST00000554901 SORCS3Q9UPU3 1222 aa17.01■□□□□ 0.31
SPTLC2-203ENST00000554901 TYW5A2RUC4 315 aaKnown RBP17■□□□□ 0.31
SPTLC2-203ENST00000554901 MIF4GDA9UHW6 222 aaKnown RBP17■□□□□ 0.31
SPTLC2-203ENST00000554901 RARAP10276 462 aa17■□□□□ 0.31
SPTLC2-203ENST00000554901 SRFP11831 508 aa17■□□□□ 0.31
SPTLC2-203ENST00000554901 TAS2R40P59535 323 aa17■□□□□ 0.31
SPTLC2-203ENST00000554901 SEMA3BQ13214 749 aa17■□□□□ 0.31
SPTLC2-203ENST00000554901 RUNX3Q13761 415 aa17■□□□□ 0.31
SPTLC2-203ENST00000554901 AUHQ13825 339 aaKnown RBP17■□□□□ 0.31
SPTLC2-203ENST00000554901 RABGAP1LQ5R372 815 aa17■□□□□ 0.31
SPTLC2-203ENST00000554901 DAB2IPQ5VWQ8 1189 aa17■□□□□ 0.31
SPTLC2-203ENST00000554901 PEX26Q7Z412 305 aa17■□□□□ 0.31
SPTLC2-203ENST00000554901 CD101Q93033 1021 aa17■□□□□ 0.31
SPTLC2-203ENST00000554901 ASIC4Q96FT7 647 aa17■□□□□ 0.31
SPTLC2-203ENST00000554901 EPAS1Q99814 870 aa17■□□□□ 0.31
SPTLC2-203ENST00000554901 SIK2Q9H0K1 926 aa17■□□□□ 0.31
SPTLC2-203ENST00000554901 ZWILCHQ9H900 591 aa17■□□□□ 0.31
SPTLC2-203ENST00000554901 SLC2A4RGQ9NR83 387 aa17■□□□□ 0.31
SPTLC2-203ENST00000554901 DDX56Q9NY93 547 aaKnown RBP17■□□□□ 0.31
SPTLC2-203ENST00000554901 PPARGC1AQ9UBK2 798 aaKnown RBP17■□□□□ 0.31
SPTLC2-203ENST00000554901 AMFRQ9UKV5 643 aa17■□□□□ 0.31
SPTLC2-203ENST00000554901 ZKSCAN5Q9Y2L8 839 aa17■□□□□ 0.31
SPTLC2-203ENST00000554901 IGLV3-10A0A075B6K4 115 aa16.99■□□□□ 0.31
SPTLC2-203ENST00000554901 CCDC66A2RUB6 948 aa16.99■□□□□ 0.31
SPTLC2-203ENST00000554901 SCAMP3O14828 347 aaKnown RBP16.99■□□□□ 0.31
SPTLC2-203ENST00000554901 HOXC11O43248 304 aaPredicted RBP16.99■□□□□ 0.31
SPTLC2-203ENST00000554901 KIF5CO60282 957 aa16.99■□□□□ 0.31
SPTLC2-203ENST00000554901 ASGR2P07307 311 aa16.99■□□□□ 0.31
SPTLC2-203ENST00000554901 TCF4P15884 667 aa16.99■□□□□ 0.31
SPTLC2-203ENST00000554901 SLC6A4P31645 630 aa16.99■□□□□ 0.31
SPTLC2-203ENST00000554901 CTNNA1P35221 906 aaKnown RBP16.99■□□□□ 0.31
SPTLC2-203ENST00000554901 PDK2Q15119 407 aa16.99■□□□□ 0.31
SPTLC2-203ENST00000554901 DHCR24Q15392 516 aa16.99■□□□□ 0.31
SPTLC2-203ENST00000554901 MANEALQ5VSG8 457 aa16.99■□□□□ 0.31
SPTLC2-203ENST00000554901 RAP1GAP2Q684P5 730 aa16.99■□□□□ 0.31
SPTLC2-203ENST00000554901 RHBDF2Q6PJF5 856 aa16.99■□□□□ 0.31
SPTLC2-203ENST00000554901 NT5DC3Q86UY8 548 aa16.99■□□□□ 0.31
SPTLC2-203ENST00000554901 VSIG1Q86XK7 387 aa16.99■□□□□ 0.31
SPTLC2-203ENST00000554901 MAP7D3Q8IWC1 876 aa16.99■□□□□ 0.31
SPTLC2-203ENST00000554901 ZNF683Q8IZ20 524 aa16.99■□□□□ 0.31
SPTLC2-203ENST00000554901 GJD3Q8N144 294 aa16.99■□□□□ 0.31
SPTLC2-203ENST00000554901 ZNF557Q8N988 423 aaPredicted RBP16.99■□□□□ 0.31
SPTLC2-203ENST00000554901 HJURPQ8NCD3 748 aaPredicted RBP16.99■□□□□ 0.31
SPTLC2-203ENST00000554901 ST13P5Q8NFI4 369 aaPredicted RBP16.99■□□□□ 0.31
SPTLC2-203ENST00000554901 FAM71BQ8TC56 605 aa16.99■□□□□ 0.31
SPTLC2-203ENST00000554901 TMA16Q96EY4 203 aaKnown RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms