RNA–Protein interactions for RNA: ENST00000553947.1

AL049839.2-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AL049839.2, Length 3,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049839.2-201ENST00000553947 FAM71DQ8N9W8 422 aa9.32□□□□□ -0.92
AL049839.2-201ENST00000553947 TMEM40Q8WWA1 233 aa9.32□□□□□ -0.92
AL049839.2-201ENST00000553947 MRRFQ96E11 262 aaKnown RBP9.32□□□□□ -0.92
AL049839.2-201ENST00000553947 SNX27Q96L92 541 aa9.32□□□□□ -0.92
AL049839.2-201ENST00000553947 B3GNT5Q9BYG0 378 aa9.32□□□□□ -0.92
AL049839.2-201ENST00000553947 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.32□□□□□ -0.928e-13■□□□□ 10.1
AL049839.2-201ENST00000553947 ITGB1BP2Q9UKP3 347 aa9.32□□□□□ -0.92
AL049839.2-201ENST00000553947 TMED5Q9Y3A6 229 aa9.32□□□□□ -0.92
AL049839.2-201ENST00000553947 DNAH12Q6ZR08 3092 aa9.32□□□□□ -0.92
AL049839.2-201ENST00000553947 EXOC1LA0A1B0GW35 172 aa9.31□□□□□ -0.92
AL049839.2-201ENST00000553947 ATP9BO43861 1147 aa9.31□□□□□ -0.92
AL049839.2-201ENST00000553947 ENDOD1O94919 500 aa9.31□□□□□ -0.92
AL049839.2-201ENST00000553947 SMIM10L2AP0DMW4 78 aa9.31□□□□□ -0.92
AL049839.2-201ENST00000553947 SMIM10L2BP0DMW5 78 aa9.31□□□□□ -0.92
AL049839.2-201ENST00000553947 TFE3P19532 575 aaPredicted RBP9.31□□□□□ -0.92
AL049839.2-201ENST00000553947 CLCN2P51788 898 aa9.31□□□□□ -0.92
AL049839.2-201ENST00000553947 CDH6P55285 790 aa9.31□□□□□ -0.92
AL049839.2-201ENST00000553947 EIF3EP60228 445 aaKnown RBP9.31□□□□□ -0.92
AL049839.2-201ENST00000553947 ITGA9Q13797 1035 aa9.31□□□□□ -0.92
AL049839.2-201ENST00000553947 SPARCL1Q14515 664 aa9.31□□□□□ -0.92
AL049839.2-201ENST00000553947 SMYD5Q6GMV2 418 aa9.31□□□□□ -0.92
AL049839.2-201ENST00000553947 NAT8LQ8N9F0 302 aa9.31□□□□□ -0.92
AL049839.2-201ENST00000553947 DQX1Q8TE96 717 aaKnown RBP9.31□□□□□ -0.92
AL049839.2-201ENST00000553947 LRRN4Q8WUT4 740 aa9.31□□□□□ -0.92
AL049839.2-201ENST00000553947 NSL1Q96IY1 281 aa9.31□□□□□ -0.92
AL049839.2-201ENST00000553947 CCDC77Q9BR77 488 aa9.31□□□□□ -0.92
AL049839.2-201ENST00000553947 FOXP3Q9BZS1 431 aa9.31□□□□□ -0.92
AL049839.2-201ENST00000553947 VPS37BQ9H9H4 285 aa9.31□□□□□ -0.92
AL049839.2-201ENST00000553947 ARL8BQ9NVJ2 186 aa9.31□□□□□ -0.92
AL049839.2-201ENST00000553947 ASNSD1Q9NWL6 643 aa9.31□□□□□ -0.92
AL049839.2-201ENST00000553947 DDX43Q9NXZ2 648 aaKnown RBP9.31□□□□□ -0.92
AL049839.2-201ENST00000553947 FLRT1Q9NZU1 646 aa9.31□□□□□ -0.92
AL049839.2-201ENST00000553947 SHOC2Q9UQ13 582 aa9.31□□□□□ -0.92
AL049839.2-201ENST00000553947 WDR91A4D1P6 747 aa9.31□□□□□ -0.92
AL049839.2-201ENST00000553947 IQCA1LA6NCM1 817 aa9.31□□□□□ -0.92
AL049839.2-201ENST00000553947 APOC4-APOC2K7ER74 178 aa9.31□□□□□ -0.92
AL049839.2-201ENST00000553947 TMEM63AO94886 807 aa9.31□□□□□ -0.92
AL049839.2-201ENST00000553947 CLPTM1O96005 669 aa9.31□□□□□ -0.92
AL049839.2-201ENST00000553947 APOC2P02655 101 aa9.31□□□□□ -0.92
AL049839.2-201ENST00000553947 IDO1P14902 403 aa9.31□□□□□ -0.92
AL049839.2-201ENST00000553947 GRIA2P42262 883 aa9.31□□□□□ -0.92
AL049839.2-201ENST00000553947 NAA20P61599 178 aa9.31□□□□□ -0.92
AL049839.2-201ENST00000553947 ZNF200P98182 395 aaPredicted RBP9.31□□□□□ -0.92
AL049839.2-201ENST00000553947 OVGP1Q12889 678 aa9.31□□□□□ -0.92
AL049839.2-201ENST00000553947 DPYSL3Q14195 570 aa9.31□□□□□ -0.92
AL049839.2-201ENST00000553947 CA9Q16790 459 aa9.31□□□□□ -0.92
AL049839.2-201ENST00000553947 SYCP2LQ5T4T6 812 aa9.31□□□□□ -0.92
AL049839.2-201ENST00000553947 IQSEC1Q6DN90 963 aa9.31□□□□□ -0.92
AL049839.2-201ENST00000553947 SLC27A1Q6PCB7 646 aa9.31□□□□□ -0.92
AL049839.2-201ENST00000553947 PATL1Q86TB9 770 aaKnown RBP9.31□□□□□ -0.92
AL049839.2-201ENST00000553947 CLEC4CQ8WTT0 213 aa9.31□□□□□ -0.92
AL049839.2-201ENST00000553947 GAB3Q8WWW8 586 aa9.31□□□□□ -0.92
AL049839.2-201ENST00000553947 RSAD2Q8WXG1 361 aa9.31□□□□□ -0.92
AL049839.2-201ENST00000553947 AGAP3Q96P47 875 aa9.31□□□□□ -0.92
AL049839.2-201ENST00000553947 ARPC5LQ9BPX5 153 aa9.31□□□□□ -0.92
AL049839.2-201ENST00000553947 CNPY3Q9BT09 278 aa9.31□□□□□ -0.92
AL049839.2-201ENST00000553947 MAGEB5Q9BZ81 275 aa9.31□□□□□ -0.92
AL049839.2-201ENST00000553947 RNF39Q9H2S5 420 aa9.31□□□□□ -0.92
AL049839.2-201ENST00000553947 SAR1AQ9NR31 198 aa9.31□□□□□ -0.92
AL049839.2-201ENST00000553947 KLK14Q9P0G3 267 aa9.31□□□□□ -0.92
AL049839.2-201ENST00000553947 CPA4Q9UI42 421 aa9.31□□□□□ -0.92
AL049839.2-201ENST00000553947 CLUHO75153 1309 aa9.31□□□□□ -0.92
AL049839.2-201ENST00000553947 SPTLC1O15269 473 aa9.3□□□□□ -0.92
AL049839.2-201ENST00000553947 PAPSS1O43252 624 aaPredicted RBP9.3□□□□□ -0.92
AL049839.2-201ENST00000553947 KRT38O76015 456 aa9.3□□□□□ -0.92
AL049839.2-201ENST00000553947 MAP3K6O95382 1288 aa9.3□□□□□ -0.92
AL049839.2-201ENST00000553947 RBP3P10745 1247 aa9.3□□□□□ -0.92
AL049839.2-201ENST00000553947 KRT15P19012 456 aa9.3□□□□□ -0.92
AL049839.2-201ENST00000553947 IL4RP24394 825 aa9.3□□□□□ -0.92
AL049839.2-201ENST00000553947 SSTR1P30872 391 aa9.3□□□□□ -0.92
AL049839.2-201ENST00000553947 SCN4AP35499 1836 aa9.3□□□□□ -0.92
AL049839.2-201ENST00000553947 TBL3Q12788 808 aaKnown RBP9.3□□□□□ -0.92
AL049839.2-201ENST00000553947 ASPHQ12797 758 aa9.3□□□□□ -0.92
AL049839.2-201ENST00000553947 EFTUD2Q15029 972 aaKnown RBP eCLIP9.3□□□□□ -0.92
AL049839.2-201ENST00000553947 PKN2Q16513 984 aaKnown RBP9.3□□□□□ -0.92
AL049839.2-201ENST00000553947 SOWAHAQ2M3V2 549 aa9.3□□□□□ -0.92
AL049839.2-201ENST00000553947 DCAF4L1Q3SXM0 396 aa9.3□□□□□ -0.92
AL049839.2-201ENST00000553947 SLC45A4Q5BKX6 768 aa9.3□□□□□ -0.92
AL049839.2-201ENST00000553947 ZNF618Q5T7W0 954 aa9.3□□□□□ -0.92
AL049839.2-201ENST00000553947 SPRYD7Q5W111 196 aa9.3□□□□□ -0.92
AL049839.2-201ENST00000553947 KLHDC10Q6PID8 442 aa9.3□□□□□ -0.92
AL049839.2-201ENST00000553947 ACAD11Q709F0 780 aa9.3□□□□□ -0.92
AL049839.2-201ENST00000553947 NT5DC4Q86YG4 428 aa9.3□□□□□ -0.92
AL049839.2-201ENST00000553947 SPATA18Q8TC71 538 aa9.3□□□□□ -0.92
AL049839.2-201ENST00000553947 DNAJB3Q8WWF6 145 aa9.3□□□□□ -0.92
AL049839.2-201ENST00000553947 CASP10Q92851 521 aa9.3□□□□□ -0.92
AL049839.2-201ENST00000553947 SRPK1Q96SB4 655 aaKnown RBP9.3□□□□□ -0.92
AL049839.2-201ENST00000553947 GCOM2Q9BZD3 368 aaPredicted RBP9.3□□□□□ -0.92
AL049839.2-201ENST00000553947 TIMMDC1Q9NPL8 285 aa9.3□□□□□ -0.92
AL049839.2-201ENST00000553947 HEY2Q9UBP5 337 aa9.3□□□□□ -0.92
AL049839.2-201ENST00000553947 GNEQ9Y223 722 aaKnown RBP9.3□□□□□ -0.92
AL049839.2-201ENST00000553947 NDC80O14777 642 aa9.3□□□□□ -0.92
AL049839.2-201ENST00000553947 RECQL4O94761 1208 aa9.3□□□□□ -0.92
AL049839.2-201ENST00000553947 FGFR1P11362 822 aa9.3□□□□□ -0.92
AL049839.2-201ENST00000553947 CYP2C9P11712 490 aa9.3□□□□□ -0.92
AL049839.2-201ENST00000553947 CA4P22748 312 aa9.3□□□□□ -0.92
AL049839.2-201ENST00000553947 LMO2P25791 158 aa9.3□□□□□ -0.92
AL049839.2-201ENST00000553947 WDR4P57081 412 aaKnown RBP9.3□□□□□ -0.92
AL049839.2-201ENST00000553947 ACAP1Q15027 740 aa9.3□□□□□ -0.92
AL049839.2-201ENST00000553947 HIF1AQ16665 826 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms