RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 SETSIPP0DME0 302 aa10.33□□□□□ -0.76
ACTN1-210ENST00000553779 POLR2EP19388 210 aaKnown RBP10.33□□□□□ -0.76
ACTN1-210ENST00000553779 TBXAS1P24557 533 aaPredicted RBP10.33□□□□□ -0.76
ACTN1-210ENST00000553779 SLC11A2P49281 568 aa10.33□□□□□ -0.76
ACTN1-210ENST00000553779 PDE4CQ08493 712 aa10.33□□□□□ -0.76
ACTN1-210ENST00000553779 CETN1Q12798 172 aa10.33□□□□□ -0.76
ACTN1-210ENST00000553779 CUL2Q13617 745 aa10.33□□□□□ -0.76
ACTN1-210ENST00000553779 SUZ12Q15022 739 aaKnown RBP10.33□□□□□ -0.76
ACTN1-210ENST00000553779 ARHGAP17Q68EM7 881 aa10.33□□□□□ -0.76
ACTN1-210ENST00000553779 RAB44Q7Z6P3 723 aaPredicted RBP10.33□□□□□ -0.76
ACTN1-210ENST00000553779 ZNF366Q8N895 744 aa10.33□□□□□ -0.76
ACTN1-210ENST00000553779 ZNF557Q8N988 423 aaPredicted RBP10.33□□□□□ -0.76
ACTN1-210ENST00000553779 UBA3Q8TBC4 463 aa10.33□□□□□ -0.76
ACTN1-210ENST00000553779 NDRG1Q92597 394 aaKnown RBP10.33□□□□□ -0.76
ACTN1-210ENST00000553779 TATDN2Q93075 761 aa10.33□□□□□ -0.76
ACTN1-210ENST00000553779 TMA16Q96EY4 203 aaKnown RBP10.33□□□□□ -0.76
ACTN1-210ENST00000553779 PIWIL1Q96J94 861 aaKnown RBP10.33□□□□□ -0.76
ACTN1-210ENST00000553779 DDX50Q9BQ39 737 aaKnown RBP10.33□□□□□ -0.76
ACTN1-210ENST00000553779 UBXN6Q9BZV1 441 aa10.33□□□□□ -0.76
ACTN1-210ENST00000553779 CCDC86Q9H6F5 360 aaKnown RBP10.33□□□□□ -0.76
ACTN1-210ENST00000553779 FBRSQ9HAH7 460 aa10.33□□□□□ -0.76
ACTN1-210ENST00000553779 ABCC13Q9NSE7 274 aa10.33□□□□□ -0.76
ACTN1-210ENST00000553779 SFMBT1Q9UHJ3 866 aa10.33□□□□□ -0.76
ACTN1-210ENST00000553779 HOOK1Q9UJC3 728 aaKnown RBP10.33□□□□□ -0.76
ACTN1-210ENST00000553779 FBXO10Q9UK96 956 aa10.33□□□□□ -0.76
ACTN1-210ENST00000553779 NCKAP1Q9Y2A7 1128 aa10.33□□□□□ -0.76
ACTN1-210ENST00000553779 NFE2L3Q9Y4A8 694 aa10.33□□□□□ -0.76
ACTN1-210ENST00000553779 ZFHX4Q86UP3 3567 aa10.33□□□□□ -0.76
ACTN1-210ENST00000553779 IGSF10Q6WRI0 2623 aa10.33□□□□□ -0.76
ACTN1-210ENST00000553779 ASXL3Q9C0F0 2248 aa10.33□□□□□ -0.76
ACTN1-210ENST00000553779 A0A1B0GVT2 93 aa10.32□□□□□ -0.76
ACTN1-210ENST00000553779 A0A1W2PQ27 194 aa10.32□□□□□ -0.76
ACTN1-210ENST00000553779 A0A1W2PQ64 194 aa10.32□□□□□ -0.76
ACTN1-210ENST00000553779 FAM47DPA6NHR8 397 aa10.32□□□□□ -0.76
ACTN1-210ENST00000553779 METTL12A8MUP2 240 aa10.32□□□□□ -0.76
ACTN1-210ENST00000553779 KCNJ18B7U540 433 aa10.32□□□□□ -0.76
ACTN1-210ENST00000553779 PIK3R2O00459 728 aa10.32□□□□□ -0.76
ACTN1-210ENST00000553779 FLRT2O43155 660 aa10.32□□□□□ -0.76
ACTN1-210ENST00000553779 TBL1XO60907 577 aa10.32□□□□□ -0.76
ACTN1-210ENST00000553779 SEMA4FO95754 770 aa10.32□□□□□ -0.76
ACTN1-210ENST00000553779 PABPC1P11940 636 aaKnown RBP10.32□□□□□ -0.76
ACTN1-210ENST00000553779 HOXD9P28356 352 aaPredicted RBP10.32□□□□□ -0.76
ACTN1-210ENST00000553779 RGS7P49802 495 aa10.32□□□□□ -0.76
ACTN1-210ENST00000553779 C21orf59P57076 290 aa10.32□□□□□ -0.76
ACTN1-210ENST00000553779 NUCB2P80303 420 aa10.32□□□□□ -0.76
ACTN1-210ENST00000553779 SFSWAPQ12872 951 aaKnown RBP10.32□□□□□ -0.76
ACTN1-210ENST00000553779 PNOCQ13519 176 aa10.32□□□□□ -0.76
ACTN1-210ENST00000553779 CDH18Q13634 790 aa10.32□□□□□ -0.76
ACTN1-210ENST00000553779 HLA-BQ31612 363 aa10.32□□□□□ -0.76
ACTN1-210ENST00000553779 CCDC40Q4G0X9 1142 aa10.32□□□□□ -0.76
ACTN1-210ENST00000553779 RAB41Q5JT25 222 aa10.32□□□□□ -0.76
ACTN1-210ENST00000553779 ADGRF1Q5T601 910 aa10.32□□□□□ -0.76
ACTN1-210ENST00000553779 RNF219Q5W0B1 726 aaPredicted RBP10.32□□□□□ -0.76
ACTN1-210ENST00000553779 BSPRYQ5W0U4 402 aa10.32□□□□□ -0.76
ACTN1-210ENST00000553779 NUGGCQ68CJ6 796 aa10.32□□□□□ -0.76
ACTN1-210ENST00000553779 ZNF776Q68DI1 518 aaPredicted RBP10.32□□□□□ -0.76
ACTN1-210ENST00000553779 LRSAM1Q6UWE0 723 aa10.32□□□□□ -0.76
ACTN1-210ENST00000553779 MFN1Q8IWA4 741 aa10.32□□□□□ -0.76
ACTN1-210ENST00000553779 RHBDD1Q8TEB9 315 aa10.32□□□□□ -0.76
ACTN1-210ENST00000553779 DNASE2BQ8WZ79 361 aa10.32□□□□□ -0.76
ACTN1-210ENST00000553779 NT5C1BQ96P26 610 aa10.32□□□□□ -0.76
ACTN1-210ENST00000553779 CDC6Q99741 560 aa10.32□□□□□ -0.76
ACTN1-210ENST00000553779 TMEM121BQ9BXQ6 578 aaPredicted RBP10.32□□□□□ -0.76
ACTN1-210ENST00000553779 BTBD1Q9H0C5 482 aa10.32□□□□□ -0.76
ACTN1-210ENST00000553779 PCED1AQ9H1Q7 454 aa10.32□□□□□ -0.76
ACTN1-210ENST00000553779 CD248Q9HCU0 757 aa10.32□□□□□ -0.76
ACTN1-210ENST00000553779 STIM2Q9P246 746 aa10.32□□□□□ -0.76
ACTN1-210ENST00000553779 ARMCX3Q9UH62 379 aaPredicted RBP10.32□□□□□ -0.76
ACTN1-210ENST00000553779 FNDC3AQ9Y2H6 1198 aaKnown RBP10.32□□□□□ -0.76
ACTN1-210ENST00000553779 PCDHB4Q9Y5E5 795 aa10.32□□□□□ -0.76
ACTN1-210ENST00000553779 TULP2O00295 520 aa10.31□□□□□ -0.76
ACTN1-210ENST00000553779 MOCS3O95396 460 aa10.31□□□□□ -0.76
ACTN1-210ENST00000553779 LATS1O95835 1130 aa10.31□□□□□ -0.76
ACTN1-210ENST00000553779 ZNF883P0CG24 379 aa10.31□□□□□ -0.76
ACTN1-210ENST00000553779 VDRP11473 427 aa10.31□□□□□ -0.76
ACTN1-210ENST00000553779 CSNK1EP49674 416 aaKnown RBP10.31□□□□□ -0.76
ACTN1-210ENST00000553779 CCT8P50990 548 aa10.31□□□□□ -0.76
ACTN1-210ENST00000553779 COPAP53621 1224 aa10.31□□□□□ -0.76
ACTN1-210ENST00000553779 TBX4P57082 545 aa10.31□□□□□ -0.76
ACTN1-210ENST00000553779 FKBP3Q00688 224 aaKnown RBP10.31□□□□□ -0.76
ACTN1-210ENST00000553779 RING1Q06587 406 aa10.31□□□□□ -0.76
ACTN1-210ENST00000553779 SCAPQ12770 1279 aa10.31□□□□□ -0.76
ACTN1-210ENST00000553779 TRIP4Q15650 581 aaPredicted RBP10.31□□□□□ -0.76
ACTN1-210ENST00000553779 MBLAC2Q68D91 279 aa10.31□□□□□ -0.76
ACTN1-210ENST00000553779 RFWD3Q6PCD5 774 aa10.31□□□□□ -0.76
ACTN1-210ENST00000553779 TMEM270Q6UE05 265 aa10.31□□□□□ -0.76
ACTN1-210ENST00000553779 UNC45BQ8IWX7 931 aa10.31□□□□□ -0.76
ACTN1-210ENST00000553779 PPM1KQ8N3J5 372 aa10.31□□□□□ -0.76
ACTN1-210ENST00000553779 HJURPQ8NCD3 748 aaPredicted RBP10.31□□□□□ -0.76
ACTN1-210ENST00000553779 ADAMTS14Q8WXS8 1223 aa10.31□□□□□ -0.76
ACTN1-210ENST00000553779 SMARCE1Q969G3 411 aa10.31□□□□□ -0.76
ACTN1-210ENST00000553779 SKA1Q96BD8 255 aa10.31□□□□□ -0.76
ACTN1-210ENST00000553779 GOLPH3LQ9H4A5 285 aa10.31□□□□□ -0.76
ACTN1-210ENST00000553779 C6orf106Q9H6K1 298 aaPredicted RBP10.31□□□□□ -0.76
ACTN1-210ENST00000553779 IL21RQ9HBE5 538 aa10.31□□□□□ -0.76
ACTN1-210ENST00000553779 GDPD2Q9HCC8 539 aa10.31□□□□□ -0.76
ACTN1-210ENST00000553779 CNGB3Q9NQW8 809 aa10.31□□□□□ -0.76
ACTN1-210ENST00000553779 SUN2Q9UH99 717 aa10.31□□□□□ -0.76
ACTN1-210ENST00000553779 PCOLCE2Q9UKZ9 415 aa10.31□□□□□ -0.76
ACTN1-210ENST00000553779 CLEC4EQ9ULY5 219 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms