RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 FBXO21O94952 628 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 SOD2P04179 222 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 CYP1A2P05177 515 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 FAM200BP0CF97 657 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 RAC2P15153 192 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 ABCB4P21439 1286 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 ELF1P32519 619 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 BMPR1AP36894 532 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 CETN2P41208 172 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 SLC1A1P43005 524 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 GPD2P43304 727 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 GABRB2P47870 512 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 TUFMP49411 452 aaKnown RBP5.26□□□□□ -1.57
VTI1B-202ENST00000553619 ST13P50502 369 aaKnown RBP5.26□□□□□ -1.57
VTI1B-202ENST00000553619 HADHBP55084 474 aaKnown RBP5.26□□□□□ -1.57
VTI1B-202ENST00000553619 GNG11P61952 73 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 RPL10AP62906 217 aaKnown RBP5.26□□□□□ -1.57
VTI1B-202ENST00000553619 NOMO3P69849 1222 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 DEFB103AP81534 67 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 UBE3AQ05086 875 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 MRPL58Q14197 206 aaKnown RBP5.26□□□□□ -1.57
VTI1B-202ENST00000553619 ACAP1Q15027 740 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 CLUL1Q15846 466 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 GOLGA7BQ2TAP0 167 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 MDH1BQ5I0G3 518 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 EFHC1Q5JVL4 640 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 ZNF569Q5MCW4 686 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 NAA35Q5VZE5 725 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 SLC6A19Q695T7 634 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 OR6B2Q6IFH4 312 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 DCUN1D2Q6PH85 259 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 VSTM1Q6UX27 236 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 CD300LGQ6UXG3 332 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 PRR23BQ6ZRT6 265 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 TMEM110Q86TL2 294 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 OSTM1Q86WC4 334 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 HERC6Q8IVU3 1022 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 SLC39A11Q8N1S5 342 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 SLC35G2Q8TBE7 412 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 FEZF2Q8TBJ5 459 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 SPPL2BQ8TCT7 592 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 HASPINQ8TF76 798 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 KCTD13Q8WZ19 329 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 TFAP2BQ92481 460 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 RABGGTAQ92696 567 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 GOLGA1Q92805 767 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 ZNF653Q96CK0 615 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 VWCEQ96DN2 955 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 SMARCD1Q96GM5 515 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 CEP295NLQ96MC4 621 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 TWNKQ96RR1 684 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 PCDHB18PQ96TA0 734 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 PAAF1Q9BRP4 392 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 TRIM62Q9BVG3 475 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 SELENOOQ9BVL4 669 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 ZCWPW1Q9H0M4 648 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 LRRC4Q9HBW1 653 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 PNPLA8Q9NP80 782 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 ACP6Q9NPH0 428 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 ST7Q9NRC1 585 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 COMMD8Q9NX08 183 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 EHD2Q9NZN4 543 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 FNIP2Q9P278 1114 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 VTI1BQ9UEU0 232 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 AMFRQ9UKV5 643 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 ZMYND8Q9ULU4 1186 aaPredicted RBP5.26□□□□□ -1.57
VTI1B-202ENST00000553619 NENFQ9UMX5 172 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 LZTS1Q9Y250 596 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 JRKLQ9Y4A0 524 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 PCDHB5Q9Y5E4 795 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 TIMM13Q9Y5L4 95 aaPredicted RBP5.26□□□□□ -1.57
VTI1B-202ENST00000553619 BACE2Q9Y5Z0 518 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 CAPN6Q9Y6Q1 641 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 ALPK3Q96L96 1907 aa5.26□□□□□ -1.57
VTI1B-202ENST00000553619 MACROD2A1Z1Q3 448 aa5.25□□□□□ -1.57
VTI1B-202ENST00000553619 MYBPHLA2RUH7 354 aa5.25□□□□□ -1.57
VTI1B-202ENST00000553619 CTAGE9A4FU28 777 aa5.25□□□□□ -1.57
VTI1B-202ENST00000553619 I3L4J1 428 aa5.25□□□□□ -1.57
VTI1B-202ENST00000553619 BUB1O43683 1085 aa5.25□□□□□ -1.57
VTI1B-202ENST00000553619 RNF8O76064 485 aa5.25□□□□□ -1.57
VTI1B-202ENST00000553619 MTA2O94776 668 aa5.25□□□□□ -1.57
VTI1B-202ENST00000553619 RTN3O95197 1032 aaPredicted RBP5.25□□□□□ -1.57
VTI1B-202ENST00000553619 C1RP00736 705 aa5.25□□□□□ -1.57
VTI1B-202ENST00000553619 URODP06132 367 aa5.25□□□□□ -1.57
VTI1B-202ENST00000553619 GLI1P08151 1106 aa5.25□□□□□ -1.57
VTI1B-202ENST00000553619 KRT3P12035 628 aa5.25□□□□□ -1.57
VTI1B-202ENST00000553619 PRLRP16471 622 aa5.25□□□□□ -1.57
VTI1B-202ENST00000553619 MMP8P22894 467 aa5.25□□□□□ -1.57
VTI1B-202ENST00000553619 ADORA2BP29275 332 aa5.25□□□□□ -1.57
VTI1B-202ENST00000553619 TKTP29401 623 aaKnown RBP5.25□□□□□ -1.57
VTI1B-202ENST00000553619 RPL34P49207 117 aaKnown RBP5.25□□□□□ -1.57
VTI1B-202ENST00000553619 GLUD2P49448 558 aa5.25□□□□□ -1.57
VTI1B-202ENST00000553619 GATMP50440 423 aa5.25□□□□□ -1.57
VTI1B-202ENST00000553619 GSCP56915 257 aaPredicted RBP5.25□□□□□ -1.57
VTI1B-202ENST00000553619 PSMC1P62191 440 aaKnown RBP5.25□□□□□ -1.57
VTI1B-202ENST00000553619 TUBB4BP68371 445 aa5.25□□□□□ -1.57
VTI1B-202ENST00000553619 SLC6A3Q01959 620 aa5.25□□□□□ -1.57
VTI1B-202ENST00000553619 DSG1Q02413 1049 aa5.25□□□□□ -1.57
VTI1B-202ENST00000553619 RPL6Q02878 288 aaKnown RBP5.25□□□□□ -1.57
VTI1B-202ENST00000553619 GPR17Q13304 367 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms