RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 TTLQ8NG68 377 aa9.21□□□□□ -0.93
GTF2A1-203ENST00000553612 TINAGL1Q9GZM7 467 aaPredicted RBP9.21□□□□□ -0.93
GTF2A1-203ENST00000553612 SLC6A15Q9H2J7 730 aa9.21□□□□□ -0.93
GTF2A1-203ENST00000553612 MAN2B2Q9Y2E5 1009 aa9.21□□□□□ -0.93
GTF2A1-203ENST00000553612 KPNA5O15131 536 aa9.21□□□□□ -0.93
GTF2A1-203ENST00000553612 CLDN3O15551 220 aa9.21□□□□□ -0.93
GTF2A1-203ENST00000553612 CYP7B1O75881 506 aa9.21□□□□□ -0.93
GTF2A1-203ENST00000553612 COL6A1P12109 1028 aa9.21□□□□□ -0.93
GTF2A1-203ENST00000553612 BGNP21810 368 aa9.21□□□□□ -0.93
GTF2A1-203ENST00000553612 QARSP47897 775 aaKnown RBP9.21□□□□□ -0.93
GTF2A1-203ENST00000553612 ADCY7P51828 1080 aa9.21□□□□□ -0.93
GTF2A1-203ENST00000553612 DEFA6Q01524 100 aa9.21□□□□□ -0.93
GTF2A1-203ENST00000553612 ZNF33BQ06732 778 aa9.21□□□□□ -0.93
GTF2A1-203ENST00000553612 TYW3Q6IPR3 259 aaKnown RBP9.21□□□□□ -0.93
GTF2A1-203ENST00000553612 POTEAQ6S8J7 498 aa9.21□□□□□ -0.93
GTF2A1-203ENST00000553612 SNAPC3Q92966 411 aa9.21□□□□□ -0.93
GTF2A1-203ENST00000553612 ZC3H10Q96K80 434 aaKnown RBP9.21□□□□□ -0.93
GTF2A1-203ENST00000553612 PCIF1Q9H4Z3 704 aa9.21□□□□□ -0.93
GTF2A1-203ENST00000553612 NARFLQ9H6Q4 476 aa9.21□□□□□ -0.93
GTF2A1-203ENST00000553612 POLMQ9NP87 494 aaPredicted RBP9.21□□□□□ -0.93
GTF2A1-203ENST00000553612 EDN3P14138 238 aa9.21□□□□□ -0.94
GTF2A1-203ENST00000553612 NUP62P37198 522 aaPredicted RBP9.21□□□□□ -0.94
GTF2A1-203ENST00000553612 AQP5P55064 265 aa9.21□□□□□ -0.94
GTF2A1-203ENST00000553612 PKNOX1P55347 436 aa9.21□□□□□ -0.94
GTF2A1-203ENST00000553612 CABP4P57796 275 aa9.21□□□□□ -0.94
GTF2A1-203ENST00000553612 GRIK5Q16478 980 aa9.21□□□□□ -0.94
GTF2A1-203ENST00000553612 CCDC142Q17RM4 750 aa9.21□□□□□ -0.94
GTF2A1-203ENST00000553612 IZUMO3Q5VZ72 239 aa9.21□□□□□ -0.94
GTF2A1-203ENST00000553612 TIGD4Q8IY51 512 aa9.21□□□□□ -0.94
GTF2A1-203ENST00000553612 LZTR1Q8N653 840 aa9.21□□□□□ -0.94
GTF2A1-203ENST00000553612 TCEAL3Q969E4 200 aa9.21□□□□□ -0.94
GTF2A1-203ENST00000553612 TESCQ96BS2 214 aa9.21□□□□□ -0.94
GTF2A1-203ENST00000553612 C17orf62Q9BQA9 187 aa9.21□□□□□ -0.94
GTF2A1-203ENST00000553612 SLC4A5Q9BY07 1137 aa9.21□□□□□ -0.94
GTF2A1-203ENST00000553612 RTFDC1Q9BY42 306 aaPredicted RBP9.21□□□□□ -0.94
GTF2A1-203ENST00000553612 DNAJC18Q9H819 358 aa9.21□□□□□ -0.94
GTF2A1-203ENST00000553612 SAR1AQ9NR31 198 aa9.21□□□□□ -0.94
GTF2A1-203ENST00000553612 HSFX1Q9UBD0 423 aa9.21□□□□□ -0.94
GTF2A1-203ENST00000553612 HSPB11Q9Y547 144 aa9.21□□□□□ -0.94
GTF2A1-203ENST00000553612 ASB4Q9Y574 426 aa9.21□□□□□ -0.94
GTF2A1-203ENST00000553612 SH3TC1Q8TE82 1336 aa9.21□□□□□ -0.94
GTF2A1-203ENST00000553612 MAGI2Q86UL8 1455 aa9.21□□□□□ -0.94
GTF2A1-203ENST00000553612 NPIPA7E9PJI5 369 aa9.21□□□□□ -0.94
GTF2A1-203ENST00000553612 NPIPA8P0DM63 369 aa9.21□□□□□ -0.94
GTF2A1-203ENST00000553612 NR2C1P13056 603 aa9.21□□□□□ -0.94
GTF2A1-203ENST00000553612 ALADP13716 330 aa9.21□□□□□ -0.94
GTF2A1-203ENST00000553612 OSBPP22059 807 aa9.21□□□□□ -0.94
GTF2A1-203ENST00000553612 PCSK6P29122 969 aa9.21□□□□□ -0.94
GTF2A1-203ENST00000553612 COG2Q14746 738 aa9.21□□□□□ -0.94
GTF2A1-203ENST00000553612 TAB1Q15750 504 aa9.21□□□□□ -0.94
GTF2A1-203ENST00000553612 EPC2Q52LR7 807 aa9.21□□□□□ -0.94
GTF2A1-203ENST00000553612 VARS2Q5ST30 1063 aaKnown RBP9.21□□□□□ -0.94
GTF2A1-203ENST00000553612 AADACL2Q6P093 401 aa9.21□□□□□ -0.94
GTF2A1-203ENST00000553612 C1orf94Q6P1W5 598 aa9.21□□□□□ -0.94
GTF2A1-203ENST00000553612 ZC3HC1Q86WB0 502 aaKnown RBP9.21□□□□□ -0.94
GTF2A1-203ENST00000553612 ZC3H7AQ8IWR0 971 aaKnown RBP9.21□□□□□ -0.94
GTF2A1-203ENST00000553612 ATG4AQ8WYN0 398 aa9.21□□□□□ -0.94
GTF2A1-203ENST00000553612 CAMKK2Q96RR4 588 aa9.21□□□□□ -0.94
GTF2A1-203ENST00000553612 HAPLN3Q96S86 360 aa9.21□□□□□ -0.94
GTF2A1-203ENST00000553612 ACTR6Q9GZN1 396 aa9.21□□□□□ -0.94
GTF2A1-203ENST00000553612 GSTA4O15217 222 aa9.21□□□□□ -0.94
GTF2A1-203ENST00000553612 NR2F2P24468 414 aa9.21□□□□□ -0.94
GTF2A1-203ENST00000553612 P2RX3P56373 397 aa9.21□□□□□ -0.94
GTF2A1-203ENST00000553612 CHI3L2Q15782 390 aa9.21□□□□□ -0.94
GTF2A1-203ENST00000553612 SEL1L3Q68CR1 1132 aa9.21□□□□□ -0.94
GTF2A1-203ENST00000553612 ARHGAP36Q6ZRI8 547 aa9.21□□□□□ -0.94
GTF2A1-203ENST00000553612 UNC13DQ70J99 1090 aa9.21□□□□□ -0.94
GTF2A1-203ENST00000553612 SH3RF1Q7Z6J0 888 aa9.21□□□□□ -0.94
GTF2A1-203ENST00000553612 NANPQ8TBE9 248 aa9.21□□□□□ -0.94
GTF2A1-203ENST00000553612 DENND1AQ8TEH3 1009 aa9.21□□□□□ -0.94
GTF2A1-203ENST00000553612 S100ZQ8WXG8 99 aa9.21□□□□□ -0.94
GTF2A1-203ENST00000553612 CIDECQ96AQ7 238 aaPredicted RBP9.21□□□□□ -0.94
GTF2A1-203ENST00000553612 GINS4Q9BRT9 223 aa9.21□□□□□ -0.94
GTF2A1-203ENST00000553612 SORBS1Q9BX66 1292 aaKnown RBP9.21□□□□□ -0.94
GTF2A1-203ENST00000553612 SLAMF7Q9NQ25 335 aa9.21□□□□□ -0.94
GTF2A1-203ENST00000553612 CPA4Q9UI42 421 aa9.21□□□□□ -0.94
GTF2A1-203ENST00000553612 RNF112Q9ULX5 631 aa9.21□□□□□ -0.94
GTF2A1-203ENST00000553612 SNX9Q9Y5X1 595 aa9.21□□□□□ -0.94
GTF2A1-203ENST00000553612 PRG4Q92954 1404 aaPredicted RBP9.21□□□□□ -0.94
GTF2A1-203ENST00000553612 MEIS1O00470 390 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 PODXLO00592 558 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 TDP2O95551 362 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 YES1P07947 543 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 CYP2D6P10635 497 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 PEX3P56589 373 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 NME5P56597 212 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 TRAF3Q13114 568 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 EPHA7Q15375 998 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 ANGPT1Q15389 498 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 GLYCTKQ8IVS8 523 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 CACTIN-AS1Q8N1I8 211 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 ENDOVQ8N8Q3 282 aaKnown RBP9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 PIK3C3Q8NEB9 887 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 CDH16O75309 829 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 MED26O95402 600 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 JUPP14923 745 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 LIG4P49917 911 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 HERC3Q15034 1050 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 CHRNA2Q15822 529 aa9.2□□□□□ -0.94
GTF2A1-203ENST00000553612 FAM47CQ5HY64 1035 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms