RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 RPL34P49207 117 aaKnown RBP5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 TUBP50607 506 aa5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 RAB27AP51159 221 aa5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 STAT5BP51692 787 aa5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 COPAP53621 1224 aa5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 PRKAA2P54646 552 aa5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 CDH6P55285 790 aa5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 BCAR1P56945 870 aa5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 DYNLT1P63172 113 aa5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 TFAMQ00059 246 aaKnown RBP5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 DEUP1Q05D60 604 aa5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 LAMTOR4Q0VGL1 99 aa5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 ASPHQ12797 758 aa5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 THOC5Q13769 683 aaKnown RBP5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 ITGA9Q13797 1035 aa5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 CCDC153Q494R4 210 aa5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 PKDCCQ504Y2 493 aa5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 FSCBQ5H9T9 825 aa5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 EFHC1Q5JVL4 640 aa5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 SH2D4BQ5SQS7 431 aa5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 HP1BP3Q5SSJ5 553 aaPredicted RBP5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 FAM102AQ5T9C2 384 aaPredicted RBP5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 TEDDM1Q5T9Z0 273 aa5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 ATF7IP2Q5U623 682 aa5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 C1orf146Q5VVC0 180 aa5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 ARMC3Q5W041 872 aa5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 OLFML1Q6UWY5 402 aa5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 IZUMO2Q6UXV1 221 aa5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 LBX2Q6XYB7 198 aa5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 UNC5AQ6ZN44 842 aa5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 CATSPERGQ6ZRH7 1159 aa5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 CDHR3Q6ZTQ4 885 aa5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 ZNF534Q76KX8 674 aa5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 PRPF39Q86UA1 669 aaKnown RBP5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 ALYREFQ86V81 257 aaKnown RBP5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 PDSS2Q86YH6 399 aa5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 NUDCD3Q8IVD9 361 aa5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 ARID3BQ8IVW6 561 aaPredicted RBP5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 KBTBD2Q8IY47 623 aa5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 ST13P4Q8IZP2 240 aaPredicted RBP5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 PQLC3Q8N755 202 aa5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 PPM1NQ8N819 430 aa5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 C1orf127Q8N9H9 656 aa5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 CATSPER1Q8NEC5 780 aa5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 OR6Y1Q8NGX8 325 aa5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 UCMAQ8WVF2 138 aa5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 PRPF31Q8WWY3 499 aaKnown RBP5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 SEPT1Q8WYJ6 367 aa5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 CENPIQ92674 756 aaPredicted RBP5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 CDKL2Q92772 493 aa5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 CLP1Q92989 425 aaKnown RBP5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 ACSF2Q96CM8 615 aaPredicted RBP5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 CMTM5Q96DZ9 223 aa5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 CNDP1Q96KN2 507 aa5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 SIGLEC10Q96LC7 697 aa5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 FGD4Q96M96 766 aa5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 FAM161BQ96MY7 647 aa5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 ACAP3Q96P50 834 aa5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 GBP5Q96PP8 586 aa5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 PANX3Q96QZ0 392 aa5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 MPHOSPH6Q99547 160 aaKnown RBP5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 C11orf84Q9BUA3 381 aaPredicted RBP5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 ELOVL4Q9GZR5 314 aa5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 CDT1Q9H211 546 aa5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 PDZD7Q9H5P4 517 aa5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 QTRT2Q9H974 415 aaKnown RBP5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 RPF1Q9H9Y2 349 aaKnown RBP5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 MRM3Q9HC36 420 aaKnown RBP5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 PCDH18Q9HCL0 1135 aa5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 VCX3AQ9NNX9 186 aa5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 PICK1Q9NRD5 415 aa5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 PRMT7Q9NVM4 692 aaPredicted RBP5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 DNAAF2Q9NVR5 837 aaKnown RBP5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 ETAA1Q9NY74 926 aa5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 HOXC10Q9NYD6 342 aa5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 PLK2Q9NYY3 685 aa5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 SAE1Q9UBE0 346 aaPredicted RBP5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 PPARGC1AQ9UBK2 798 aaKnown RBP5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 DCDC2Q9UHG0 476 aa5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 MID2Q9UJV3 735 aa5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 VPS28Q9UK41 221 aa5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 BARX2Q9UMQ3 279 aaPredicted RBP5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 APOBEC2Q9Y235 224 aaKnown RBP5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 DERAQ9Y315 318 aa5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 PCDHA11Q9Y5I1 949 aa5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 RAD54BQ9Y620 910 aa5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 COMMD3-BMI1R4GMX3 469 aa5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 COL1A2P08123 1366 aa5.42□□□□□ -1.54
TMEM55B-204ENST00000553602 A0A0A0MRY4 1105 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 ZBTB42B2RXF5 422 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 GPR25O00155 361 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 KCNN4O15554 427 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 PLIN3O60664 434 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 GSRP00390 522 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 PENKP01210 267 aaPredicted RBP5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 PROCP04070 461 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 CAPNS1P04632 268 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 APOA4P06727 396 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 ENO1P06733 434 aaKnown RBP5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 FGF3P11487 239 aaPredicted RBP5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms