RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 PLK2Q9NYY3 685 aa12.38□□□□□ -0.43
SRP54-203ENST00000553544 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.38□□□□□ -0.43
SRP54-203ENST00000553544 ZNF510Q9Y2H8 683 aa12.38□□□□□ -0.43
SRP54-203ENST00000553544 SLC27A6Q9Y2P4 619 aa12.38□□□□□ -0.43
SRP54-203ENST00000553544 FAM149AA5PLN7 773 aa12.37□□□□□ -0.43
SRP54-203ENST00000553544 TIMM44O43615 452 aa12.37□□□□□ -0.43
SRP54-203ENST00000553544 IGLV3-19P01714 112 aa12.37□□□□□ -0.43
SRP54-203ENST00000553544 HLA-EP13747 358 aa12.37□□□□□ -0.43
SRP54-203ENST00000553544 GRK6P43250 576 aa12.37□□□□□ -0.43
SRP54-203ENST00000553544 ABCG1P45844 678 aa12.37□□□□□ -0.43
SRP54-203ENST00000553544 FMO5P49326 533 aa12.37□□□□□ -0.43
SRP54-203ENST00000553544 RAD23BP54727 409 aa12.37□□□□□ -0.43
SRP54-203ENST00000553544 ENPP2Q13822 863 aa12.37□□□□□ -0.43
SRP54-203ENST00000553544 KIF19Q2TAC6 998 aa12.37□□□□□ -0.43
SRP54-203ENST00000553544 ZNF394Q53GI3 561 aa12.37□□□□□ -0.43
SRP54-203ENST00000553544 CCDC157Q569K6 752 aa12.37□□□□□ -0.43
SRP54-203ENST00000553544 ARHGAP17Q68EM7 881 aa12.37□□□□□ -0.43
SRP54-203ENST00000553544 GPRIN1Q7Z2K8 1008 aa12.37□□□□□ -0.43
SRP54-203ENST00000553544 TMPRSS12Q86WS5 348 aa12.37□□□□□ -0.43
SRP54-203ENST00000553544 NELFBQ8WX92 580 aa12.37□□□□□ -0.43
SRP54-203ENST00000553544 CRELD1Q96HD1 420 aa12.37□□□□□ -0.43
SRP54-203ENST00000553544 TMEM176AQ96HP8 235 aa12.37□□□□□ -0.43
SRP54-203ENST00000553544 DCBLD2Q96PD2 775 aa12.37□□□□□ -0.43
SRP54-203ENST00000553544 DUSP16Q9BY84 665 aa12.37□□□□□ -0.43
SRP54-203ENST00000553544 CYLDQ9NQC7 956 aa12.37□□□□□ -0.43
SRP54-203ENST00000553544 DNMT3LQ9UJW3 386 aa12.37□□□□□ -0.43
SRP54-203ENST00000553544 SCML2Q9UQR0 700 aa12.37□□□□□ -0.43
SRP54-203ENST00000553544 USP3Q9Y6I4 520 aa12.37□□□□□ -0.43
SRP54-203ENST00000553544 BICDL2A1A5D9 508 aa12.36□□□□□ -0.43
SRP54-203ENST00000553544 BIN1O00499 593 aa12.36□□□□□ -0.43
SRP54-203ENST00000553544 PRB1P04280 392 aa12.36□□□□□ -0.43
SRP54-203ENST00000553544 CHKAP35790 457 aa12.36□□□□□ -0.43
SRP54-203ENST00000553544 IL12RB1P42701 662 aa12.36□□□□□ -0.43
SRP54-203ENST00000553544 KIF11P52732 1056 aa12.36□□□□□ -0.43
SRP54-203ENST00000553544 MARSP56192 900 aaKnown RBP12.36□□□□□ -0.43
SRP54-203ENST00000553544 CUL2Q13617 745 aa12.36□□□□□ -0.43
SRP54-203ENST00000553544 KLHL10Q6JEL2 608 aa12.36□□□□□ -0.43
SRP54-203ENST00000553544 KLHDC10Q6PID8 442 aa12.36□□□□□ -0.43
SRP54-203ENST00000553544 LRRC69Q6ZNQ3 347 aa12.36□□□□□ -0.43
SRP54-203ENST00000553544 TADA2BQ86TJ2 420 aa12.36□□□□□ -0.43
SRP54-203ENST00000553544 FAM124AQ86V42 546 aa12.36□□□□□ -0.43
SRP54-203ENST00000553544 UBR7Q8N806 425 aa12.36□□□□□ -0.43
SRP54-203ENST00000553544 LSM14AQ8ND56 463 aaKnown RBP12.36□□□□□ -0.43
SRP54-203ENST00000553544 LMO3Q8TAP4 145 aa12.36□□□□□ -0.43
SRP54-203ENST00000553544 SNX19Q92543 992 aa12.36□□□□□ -0.43
SRP54-203ENST00000553544 HEXIM2Q96MH2 286 aaKnown RBP12.36□□□□□ -0.43
SRP54-203ENST00000553544 UBXN6Q9BZV1 441 aa12.36□□□□□ -0.43
SRP54-203ENST00000553544 DNAI2Q9GZS0 605 aa12.36□□□□□ -0.43
SRP54-203ENST00000553544 OSGEPQ9NPF4 335 aa12.36□□□□□ -0.43
SRP54-203ENST00000553544 OSER1Q9NX31 292 aa12.36□□□□□ -0.43
SRP54-203ENST00000553544 ELOVL2Q9NXB9 296 aa12.36□□□□□ -0.43
SRP54-203ENST00000553544 KIAA1468Q9P260 1216 aa12.36□□□□□ -0.43
SRP54-203ENST00000553544 BTBD3Q9Y2F9 522 aa12.36□□□□□ -0.43
SRP54-203ENST00000553544 ANKRD6Q9Y2G4 727 aa12.36□□□□□ -0.43
SRP54-203ENST00000553544 SNX11Q9Y5W9 270 aa12.36□□□□□ -0.43
SRP54-203ENST00000553544 KCNK3O14649 394 aa12.35□□□□□ -0.43
SRP54-203ENST00000553544 ATXN7O15265 892 aaPredicted RBP12.35□□□□□ -0.43
SRP54-203ENST00000553544 P4HA2O15460 535 aa12.35□□□□□ -0.43
SRP54-203ENST00000553544 PCDHGA12O60330 932 aa12.35□□□□□ -0.43
SRP54-203ENST00000553544 DFNA5O60443 496 aa12.35□□□□□ -0.43
SRP54-203ENST00000553544 RARGP13631 454 aa12.35□□□□□ -0.43
SRP54-203ENST00000553544 JUPP14923 745 aa12.35□□□□□ -0.43
SRP54-203ENST00000553544 MFAP3P55082 362 aa12.35□□□□□ -0.43
SRP54-203ENST00000553544 PAK1Q13153 545 aa12.35□□□□□ -0.43
SRP54-203ENST00000553544 PTPRNQ16849 979 aa12.35□□□□□ -0.43
SRP54-203ENST00000553544 GEN1Q17RS7 908 aa12.35□□□□□ -0.43
SRP54-203ENST00000553544 C10orf120Q5SQS8 335 aa12.35□□□□□ -0.43
SRP54-203ENST00000553544 DHRS13Q6UX07 377 aa12.35□□□□□ -0.43
SRP54-203ENST00000553544 Q6ZNB5 142 aa12.35□□□□□ -0.43
SRP54-203ENST00000553544 ZNF605Q86T29 641 aa12.35□□□□□ -0.43
SRP54-203ENST00000553544 TRIM59Q8IWR1 403 aa12.35□□□□□ -0.43
SRP54-203ENST00000553544 ZNF276Q8N554 614 aa12.35□□□□□ -0.43
SRP54-203ENST00000553544 PIP4K2CQ8TBX8 421 aa12.35□□□□□ -0.43
SRP54-203ENST00000553544 IGSF8Q969P0 613 aa12.35□□□□□ -0.43
SRP54-203ENST00000553544 IPO9Q96P70 1041 aaKnown RBP12.35□□□□□ -0.43
SRP54-203ENST00000553544 NMUR1Q9HB89 426 aa12.35□□□□□ -0.43
SRP54-203ENST00000553544 CTNND2Q9UQB3 1225 aa12.35□□□□□ -0.43
SRP54-203ENST00000553544 PTPRBP23467 1997 aa12.35□□□□□ -0.43
SRP54-203ENST00000553544 GOLGA6L22H0YM25 854 aa12.34□□□□□ -0.43
SRP54-203ENST00000553544 RRP8O43159 456 aaKnown RBP12.34□□□□□ -0.43
SRP54-203ENST00000553544 CYP26A1O43174 497 aa12.34□□□□□ -0.43
SRP54-203ENST00000553544 PENKP01210 267 aaPredicted RBP12.34□□□□□ -0.43
SRP54-203ENST00000553544 CYBBP04839 570 aa12.34□□□□□ -0.43
SRP54-203ENST00000553544 EPHX1P07099 455 aa12.34□□□□□ -0.43
SRP54-203ENST00000553544 CDK4P11802 303 aa12.34□□□□□ -0.43
SRP54-203ENST00000553544 PSEN1P49768 467 aa12.34□□□□□ -0.43
SRP54-203ENST00000553544 COPAP53621 1224 aa12.34□□□□□ -0.43
SRP54-203ENST00000553544 STX17P56962 302 aa12.34□□□□□ -0.43
SRP54-203ENST00000553544 COG7P83436 770 aa12.34□□□□□ -0.43
SRP54-203ENST00000553544 ARID5AQ03989 594 aa12.34□□□□□ -0.43
SRP54-203ENST00000553544 ZNF234Q14588 700 aa12.34□□□□□ -0.43
SRP54-203ENST00000553544 EIF4HQ15056 248 aaKnown RBP12.34□□□□□ -0.43
SRP54-203ENST00000553544 INAVAQ3KP66 663 aa12.34□□□□□ -0.43
SRP54-203ENST00000553544 CCDC40Q4G0X9 1142 aa12.34□□□□□ -0.43
SRP54-203ENST00000553544 RAB41Q5JT25 222 aa12.34□□□□□ -0.43
SRP54-203ENST00000553544 C6orf118Q5T5N4 469 aa12.34□□□□□ -0.43
SRP54-203ENST00000553544 CCDC186Q7Z3E2 898 aa12.34□□□□□ -0.43
SRP54-203ENST00000553544 SCD5Q86SK9 330 aa12.34□□□□□ -0.43
SRP54-203ENST00000553544 ANKRD52Q8NB46 1076 aa12.34□□□□□ -0.43
SRP54-203ENST00000553544 JAKMIP2Q96AA8 810 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms