RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 NAT8LQ8N9F0 302 aa7.57□□□□□ -1.2
ATXN3-221ENST00000553498 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.57□□□□□ -1.2
ATXN3-221ENST00000553498 RNF169Q8NCN4 708 aa7.57□□□□□ -1.2
ATXN3-221ENST00000553498 C3orf58Q8NDZ4 430 aa7.57□□□□□ -1.2
ATXN3-221ENST00000553498 PCDH19Q8TAB3 1148 aa7.57□□□□□ -1.2
ATXN3-221ENST00000553498 C2orf15Q8WU43 125 aaKnown RBP7.57□□□□□ -1.2
ATXN3-221ENST00000553498 PRCCQ92733 491 aaPredicted RBP7.57□□□□□ -1.2
ATXN3-221ENST00000553498 FAM149B1Q96BN6 582 aa7.57□□□□□ -1.2
ATXN3-221ENST00000553498 ACSF2Q96CM8 615 aaPredicted RBP7.57□□□□□ -1.2
ATXN3-221ENST00000553498 FAM193BQ96PV7 902 aaPredicted RBP7.57□□□□□ -1.2
ATXN3-221ENST00000553498 CSPG4P5Q96PW8 444 aa7.57□□□□□ -1.2
ATXN3-221ENST00000553498 GAS2L1Q99501 681 aaPredicted RBP7.57□□□□□ -1.2
ATXN3-221ENST00000553498 PKMYT1Q99640 499 aa7.57□□□□□ -1.2
ATXN3-221ENST00000553498 SMOQ99835 787 aa7.57□□□□□ -1.2
ATXN3-221ENST00000553498 TMEM175Q9BSA9 504 aa7.57□□□□□ -1.2
ATXN3-221ENST00000553498 KLC2Q9H0B6 622 aa7.57□□□□□ -1.2
ATXN3-221ENST00000553498 ZNF358Q9NW07 568 aa7.57□□□□□ -1.2
ATXN3-221ENST00000553498 COMMD8Q9NX08 183 aa7.57□□□□□ -1.2
ATXN3-221ENST00000553498 DONSONQ9NYP3 566 aa7.57□□□□□ -1.2
ATXN3-221ENST00000553498 NINJ2Q9NZG7 142 aa7.57□□□□□ -1.2
ATXN3-221ENST00000553498 LGALS13Q9UHV8 139 aa7.57□□□□□ -1.2
ATXN3-221ENST00000553498 SLC24A2Q9UI40 661 aa7.57□□□□□ -1.2
ATXN3-221ENST00000553498 FZD10Q9ULW2 581 aa7.57□□□□□ -1.2
ATXN3-221ENST00000553498 RALGAPA2Q2PPJ7 1873 aa7.57□□□□□ -1.2
ATXN3-221ENST00000553498 C5orf60A6NFR6 353 aa7.56□□□□□ -1.2
ATXN3-221ENST00000553498 A6NJY4 79 aa7.56□□□□□ -1.2
ATXN3-221ENST00000553498 HHLA1C9JL84 531 aa7.56□□□□□ -1.2
ATXN3-221ENST00000553498 H7C0C1 242 aa7.56□□□□□ -1.2
ATXN3-221ENST00000553498 M0QYT0 321 aa7.56□□□□□ -1.2
ATXN3-221ENST00000553498 PIK3R2O00459 728 aa7.56□□□□□ -1.2
ATXN3-221ENST00000553498 CDK2AP1O14519 115 aa7.56□□□□□ -1.2
ATXN3-221ENST00000553498 PPP1R12AO14974 1030 aaPredicted RBP7.56□□□□□ -1.2
ATXN3-221ENST00000553498 ATP2C2O75185 946 aa7.56□□□□□ -1.2
ATXN3-221ENST00000553498 LTFP02788 710 aa7.56□□□□□ -1.2
ATXN3-221ENST00000553498 MX2P20592 715 aa7.56□□□□□ -1.2
ATXN3-221ENST00000553498 ACAT1P24752 427 aaKnown RBP7.56□□□□□ -1.2
ATXN3-221ENST00000553498 SERPINB6P35237 376 aa7.56□□□□□ -1.2
ATXN3-221ENST00000553498 RPL22P35268 128 aaKnown RBP7.56□□□□□ -1.2
ATXN3-221ENST00000553498 MMP13P45452 471 aa7.56□□□□□ -1.2
ATXN3-221ENST00000553498 ATP5OP48047 213 aa7.56□□□□□ -1.2
ATXN3-221ENST00000553498 SLC18A1P54219 525 aa7.56□□□□□ -1.2
ATXN3-221ENST00000553498 GYS2P54840 703 aa7.56□□□□□ -1.2
ATXN3-221ENST00000553498 MAGOHP61326 146 aaKnown RBP7.56□□□□□ -1.2
ATXN3-221ENST00000553498 CAP1Q01518 475 aa7.56□□□□□ -1.2
ATXN3-221ENST00000553498 RNASELQ05823 741 aaKnown RBP7.56□□□□□ -1.2
ATXN3-221ENST00000553498 UBAP2LQ14157 1087 aaKnown RBP7.56□□□□□ -1.2
ATXN3-221ENST00000553498 PAFAH1B3Q15102 231 aaKnown RBP7.56□□□□□ -1.2
ATXN3-221ENST00000553498 PDK1Q15118 436 aa7.56□□□□□ -1.2
ATXN3-221ENST00000553498 TRIP13Q15645 432 aaPredicted RBP7.56□□□□□ -1.2
ATXN3-221ENST00000553498 KLHL38Q2WGJ6 581 aa7.56□□□□□ -1.2
ATXN3-221ENST00000553498 ZC3H12AQ5D1E8 599 aaKnown RBP7.56□□□□□ -1.2
ATXN3-221ENST00000553498 BRMS1LQ5PSV4 323 aa7.56□□□□□ -1.2
ATXN3-221ENST00000553498 SH3PXD2AQ5TCZ1 1133 aa7.56□□□□□ -1.2
ATXN3-221ENST00000553498 KCTD16Q68DU8 428 aa7.56□□□□□ -1.2
ATXN3-221ENST00000553498 CD300LGQ6UXG3 332 aa7.56□□□□□ -1.2
ATXN3-221ENST00000553498 SPATA2LQ8IUW3 424 aaPredicted RBP7.56□□□□□ -1.2
ATXN3-221ENST00000553498 FAM126BQ8IXS8 530 aa7.56□□□□□ -1.2
ATXN3-221ENST00000553498 COLGALT2Q8IYK4 626 aa7.56□□□□□ -1.2
ATXN3-221ENST00000553498 FAM71DQ8N9W8 422 aa7.56□□□□□ -1.2
ATXN3-221ENST00000553498 ATP11CQ8NB49 1132 aa7.56□□□□□ -1.2
ATXN3-221ENST00000553498 ZSCAN1Q8NBB4 408 aa7.56□□□□□ -1.2
ATXN3-221ENST00000553498 MCUQ8NE86 351 aa7.56□□□□□ -1.2
ATXN3-221ENST00000553498 OR2W6PQ8NHA6 318 aa7.56□□□□□ -1.2
ATXN3-221ENST00000553498 ZNF296Q8WUU4 475 aaPredicted RBP7.56□□□□□ -1.2
ATXN3-221ENST00000553498 CPT1BQ92523 772 aa7.56□□□□□ -1.2
ATXN3-221ENST00000553498 MYLPFQ96A32 169 aa7.56□□□□□ -1.2
ATXN3-221ENST00000553498 C8orf48Q96LL4 319 aa7.56□□□□□ -1.2
ATXN3-221ENST00000553498 CNTNAP3BQ96NU0 1288 aa7.56□□□□□ -1.2
ATXN3-221ENST00000553498 PPP1R2P1Q96PQ5 205 aa7.56□□□□□ -1.2
ATXN3-221ENST00000553498 QKIQ96PU8 341 aaKnown RBP eCLIP7.56□□□□□ -1.2
ATXN3-221ENST00000553498 RTP3Q9BQQ7 232 aa7.56□□□□□ -1.2
ATXN3-221ENST00000553498 COLEC11Q9BWP8 271 aa7.56□□□□□ -1.2
ATXN3-221ENST00000553498 CNTNAP3Q9BZ76 1288 aa7.56□□□□□ -1.2
ATXN3-221ENST00000553498 PPP1R12CQ9BZL4 782 aa7.56□□□□□ -1.2
ATXN3-221ENST00000553498 ULBP1Q9BZM6 244 aa7.56□□□□□ -1.2
ATXN3-221ENST00000553498 FAM107BQ9H098 131 aa7.56□□□□□ -1.2
ATXN3-221ENST00000553498 ZCWPW1Q9H0M4 648 aa7.56□□□□□ -1.2
ATXN3-221ENST00000553498 TRPV6Q9H1D0 765 aa7.56□□□□□ -1.2
ATXN3-221ENST00000553498 CENPHQ9H3R5 247 aa7.56□□□□□ -1.2
ATXN3-221ENST00000553498 FBXO44Q9H4M3 255 aa7.56□□□□□ -1.2
ATXN3-221ENST00000553498 DHX35Q9H5Z1 703 aaKnown RBP7.56□□□□□ -1.2
ATXN3-221ENST00000553498 USP29Q9HBJ7 922 aa7.56□□□□□ -1.2
ATXN3-221ENST00000553498 PAK6Q9NQU5 681 aaPredicted RBP7.56□□□□□ -1.2
ATXN3-221ENST00000553498 ABCC13Q9NSE7 274 aa7.56□□□□□ -1.2
ATXN3-221ENST00000553498 MTMR10Q9NXD2 777 aa7.56□□□□□ -1.2
ATXN3-221ENST00000553498 FNIP2Q9P278 1114 aa7.56□□□□□ -1.2
ATXN3-221ENST00000553498 SLC12A6Q9UHW9 1150 aa7.56□□□□□ -1.2
ATXN3-221ENST00000553498 FBXW11Q9UKB1 542 aa7.56□□□□□ -1.2
ATXN3-221ENST00000553498 NOVA2Q9UNW9 492 aaKnown RBP7.56□□□□□ -1.2
ATXN3-221ENST00000553498 PCDHB7Q9Y5E2 793 aa7.56□□□□□ -1.2
ATXN3-221ENST00000553498 THSD7BQ9C0I4 1608 aa7.56□□□□□ -1.2
ATXN3-221ENST00000553498 SCN10AQ9Y5Y9 1956 aa7.55□□□□□ -1.2
ATXN3-221ENST00000553498 H7C4K7 107 aa7.55□□□□□ -1.2
ATXN3-221ENST00000553498 AP3B1O00203 1094 aa7.55□□□□□ -1.2
ATXN3-221ENST00000553498 CLDN5O00501 218 aa7.55□□□□□ -1.2
ATXN3-221ENST00000553498 KCNN4O15554 427 aa7.55□□□□□ -1.2
ATXN3-221ENST00000553498 HCRTO43612 131 aa7.55□□□□□ -1.2
ATXN3-221ENST00000553498 OPHN1O60890 802 aa7.55□□□□□ -1.2
ATXN3-221ENST00000553498 TADA2AO75478 443 aa7.55□□□□□ -1.2
ATXN3-221ENST00000553498 DGKIO75912 1065 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms