RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 PEX3P56589 373 aa5.47□□□□□ -1.53
CKAP4-203ENST00000553039 ZXDBP98169 803 aa5.47□□□□□ -1.53
CKAP4-203ENST00000553039 SPAG1Q07617 926 aa5.47□□□□□ -1.53
CKAP4-203ENST00000553039 KRT32Q14532 448 aa5.47□□□□□ -1.53
CKAP4-203ENST00000553039 PDIA5Q14554 519 aa5.47□□□□□ -1.53
CKAP4-203ENST00000553039 NECTIN1Q15223 517 aa5.47□□□□□ -1.53
CKAP4-203ENST00000553039 MAPRE1Q15691 268 aaKnown RBP5.47□□□□□ -1.53
CKAP4-203ENST00000553039 TBR1Q16650 682 aa5.47□□□□□ -1.53
CKAP4-203ENST00000553039 SKIDA1Q1XH10 827 aa5.47□□□□□ -1.53
CKAP4-203ENST00000553039 CFAP221Q4G0U5 840 aa5.47□□□□□ -1.53
CKAP4-203ENST00000553039 KCNT1Q5JUK3 1230 aa5.47□□□□□ -1.53
CKAP4-203ENST00000553039 CDCP2Q5VXM1 449 aa5.47□□□□□ -1.53
CKAP4-203ENST00000553039 HIST2H2BCQ6DN03 193 aa5.47□□□□□ -1.53
CKAP4-203ENST00000553039 CPLX2Q6PUV4 134 aaKnown RBP5.47□□□□□ -1.53
CKAP4-203ENST00000553039 VSTM1Q6UX27 236 aa5.47□□□□□ -1.53
CKAP4-203ENST00000553039 ZPBP2Q6X784 338 aa5.47□□□□□ -1.53
CKAP4-203ENST00000553039 C14orf80Q86SX3 495 aa5.47□□□□□ -1.53
CKAP4-203ENST00000553039 CATSPER3Q86XQ3 398 aa5.47□□□□□ -1.53
CKAP4-203ENST00000553039 PTRH1Q86Y79 214 aaKnown RBP5.47□□□□□ -1.53
CKAP4-203ENST00000553039 SMC5Q8IY18 1101 aa5.47□□□□□ -1.53
CKAP4-203ENST00000553039 SRRM1Q8IYB3 904 aaKnown RBP5.47□□□□□ -1.53
CKAP4-203ENST00000553039 PHC3Q8NDX5 983 aa5.47□□□□□ -1.53
CKAP4-203ENST00000553039 ZBTB45Q96K62 511 aaPredicted RBP5.47□□□□□ -1.53
CKAP4-203ENST00000553039 NTPCRQ9BSD7 190 aaKnown RBP5.47□□□□□ -1.53
CKAP4-203ENST00000553039 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.47□□□□□ -1.53
CKAP4-203ENST00000553039 KLF16Q9BXK1 252 aaPredicted RBP5.47□□□□□ -1.53
CKAP4-203ENST00000553039 EPN3Q9H201 632 aa5.47□□□□□ -1.53
CKAP4-203ENST00000553039 USP29Q9HBJ7 922 aa5.47□□□□□ -1.53
CKAP4-203ENST00000553039 CD93Q9NPY3 652 aa5.47□□□□□ -1.53
CKAP4-203ENST00000553039 AASDHPPTQ9NRN7 309 aa5.47□□□□□ -1.53
CKAP4-203ENST00000553039 FANCLQ9NW38 375 aa5.47□□□□□ -1.53
CKAP4-203ENST00000553039 THAP10Q9P2Z0 257 aaPredicted RBP5.47□□□□□ -1.53
CKAP4-203ENST00000553039 TUBD1Q9UJT1 453 aa5.47□□□□□ -1.53
CKAP4-203ENST00000553039 DERAQ9Y315 318 aa5.47□□□□□ -1.53
CKAP4-203ENST00000553039 ICE1Q9Y2F5 2266 aa5.47□□□□□ -1.53
CKAP4-203ENST00000553039 TLN1Q9Y490 2541 aaKnown RBP5.46□□□□□ -1.53
CKAP4-203ENST00000553039 COL5A1P20908 1838 aaPredicted RBP5.46□□□□□ -1.53
CKAP4-203ENST00000553039 KIF26AQ9ULI4 1882 aaPredicted RBP5.46□□□□□ -1.54
CKAP4-203ENST00000553039 A0A1W2PP55 124 aa5.46□□□□□ -1.54
CKAP4-203ENST00000553039 A0A1W2PPC4 97 aa5.46□□□□□ -1.54
CKAP4-203ENST00000553039 NEMP2A6NFY4 417 aa5.46□□□□□ -1.54
CKAP4-203ENST00000553039 PRRT4C9JH25 899 aa5.46□□□□□ -1.54
CKAP4-203ENST00000553039 H0YCG3 227 aa5.46□□□□□ -1.54
CKAP4-203ENST00000553039 TMX2-CTNND1H3BSU7 103 aa5.46□□□□□ -1.54
CKAP4-203ENST00000553039 CACNG3O60359 315 aa5.46□□□□□ -1.54
CKAP4-203ENST00000553039 HUS1O60921 280 aa5.46□□□□□ -1.54
CKAP4-203ENST00000553039 TADA3O75528 432 aa5.46□□□□□ -1.54
CKAP4-203ENST00000553039 TNFSF15O95150 251 aa5.46□□□□□ -1.54
CKAP4-203ENST00000553039 DEXIO95424 95 aa5.46□□□□□ -1.54
CKAP4-203ENST00000553039 EDN1P05305 212 aa5.46□□□□□ -1.54
CKAP4-203ENST00000553039 CISD3P0C7P0 127 aa5.46□□□□□ -1.54
CKAP4-203ENST00000553039 SPATA31C1P0DKV0 1188 aa5.46□□□□□ -1.54
CKAP4-203ENST00000553039 CXCL8P10145 99 aa5.46□□□□□ -1.54
CKAP4-203ENST00000553039 TYRP14679 529 aa5.46□□□□□ -1.54
CKAP4-203ENST00000553039 EPB42P16452 691 aa5.46□□□□□ -1.54
CKAP4-203ENST00000553039 PCSK1P29120 753 aa5.46□□□□□ -1.54
CKAP4-203ENST00000553039 EPHA8P29322 1005 aaPredicted RBP5.46□□□□□ -1.54
CKAP4-203ENST00000553039 ACSL1P33121 698 aa5.46□□□□□ -1.54
CKAP4-203ENST00000553039 PNPLA4P41247 253 aa5.46□□□□□ -1.54
CKAP4-203ENST00000553039 NPTX2P47972 431 aa5.46□□□□□ -1.54
CKAP4-203ENST00000553039 HARS2P49590 506 aaKnown RBP5.46□□□□□ -1.54
CKAP4-203ENST00000553039 MCL1Q07820 350 aa5.46□□□□□ -1.54
CKAP4-203ENST00000553039 GOLGA8FQ08AF8 430 aa5.46□□□□□ -1.54
CKAP4-203ENST00000553039 GOLGA8DPQ0D2H9 430 aa5.46□□□□□ -1.54
CKAP4-203ENST00000553039 OVGP1Q12889 678 aa5.46□□□□□ -1.54
CKAP4-203ENST00000553039 BNIP3Q12983 259 aa5.46□□□□□ -1.54
CKAP4-203ENST00000553039 NTRK3Q16288 839 aa5.46□□□□□ -1.54
CKAP4-203ENST00000553039 CALCRLQ16602 461 aa5.46□□□□□ -1.54
CKAP4-203ENST00000553039 ISXQ2M1V0 245 aa5.46□□□□□ -1.54
CKAP4-203ENST00000553039 SV2CQ496J9 727 aa5.46□□□□□ -1.54
CKAP4-203ENST00000553039 HECTD3Q5T447 861 aa5.46□□□□□ -1.54
CKAP4-203ENST00000553039 HTR3DQ70Z44 454 aa5.46□□□□□ -1.54
CKAP4-203ENST00000553039 TMEM86AQ8N2M4 240 aa5.46□□□□□ -1.54
CKAP4-203ENST00000553039 LILRB2Q8N423 598 aa5.46□□□□□ -1.54
CKAP4-203ENST00000553039 C1orf127Q8N9H9 656 aa5.46□□□□□ -1.54
CKAP4-203ENST00000553039 PDZD8Q8NEN9 1154 aa5.46□□□□□ -1.54
CKAP4-203ENST00000553039 OR2T3Q8NH03 318 aa5.46□□□□□ -1.54
CKAP4-203ENST00000553039 WDR36Q8NI36 951 aaKnown RBP5.46□□□□□ -1.54
CKAP4-203ENST00000553039 SSC4DQ8WTU2 575 aa5.46□□□□□ -1.54
CKAP4-203ENST00000553039 GOLGA1Q92805 767 aa5.46□□□□□ -1.54
CKAP4-203ENST00000553039 KIFC3Q9BVG8 833 aa5.46□□□□□ -1.54
CKAP4-203ENST00000553039 BBS2Q9BXC9 721 aa5.46□□□□□ -1.54
CKAP4-203ENST00000553039 SRRTQ9BXP5 876 aaKnown RBP5.46□□□□□ -1.54
CKAP4-203ENST00000553039 CCSER1Q9C0I3 900 aa5.46□□□□□ -1.54
CKAP4-203ENST00000553039 NACA2Q9H009 215 aa5.46□□□□□ -1.54
CKAP4-203ENST00000553039 LHX5Q9H2C1 402 aa5.46□□□□□ -1.54
CKAP4-203ENST00000553039 ASB7Q9H672 318 aa5.46□□□□□ -1.54
CKAP4-203ENST00000553039 FBRSQ9HAH7 460 aa5.46□□□□□ -1.54
CKAP4-203ENST00000553039 TMLHEQ9NVH6 421 aa5.46□□□□□ -1.54
CKAP4-203ENST00000553039 DDX43Q9NXZ2 648 aaKnown RBP5.46□□□□□ -1.54
CKAP4-203ENST00000553039 GTF3C4Q9UKN8 822 aa5.46□□□□□ -1.54
CKAP4-203ENST00000553039 PLA2G4CQ9UP65 541 aa5.46□□□□□ -1.54
CKAP4-203ENST00000553039 SATB2Q9UPW6 733 aa5.46□□□□□ -1.54
CKAP4-203ENST00000553039 SETD2Q9BYW2 2564 aaPredicted RBP5.46□□□□□ -1.54
CKAP4-203ENST00000553039 RP1L1Q8IWN7 2480 aaPredicted RBP5.46□□□□□ -1.54
CKAP4-203ENST00000553039 NUP210Q8TEM1 1887 aaPredicted RBP5.45□□□□□ -1.54
CKAP4-203ENST00000553039 MUC22E2RYF6 1773 aaPredicted RBP5.45□□□□□ -1.54
CKAP4-203ENST00000553039 HELZP42694 1942 aaKnown RBP5.45□□□□□ -1.54
CKAP4-203ENST00000553039 A0A1B0GTL3 188 aa5.45□□□□□ -1.54
CKAP4-203ENST00000553039 LRRC72A6NJI9 287 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms