RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 NFU1Q9UMS0 254 aa5.95□□□□□ -1.46
CPSF6-206ENST00000550987 DERAQ9Y315 318 aa5.95□□□□□ -1.46
CPSF6-206ENST00000550987 SLC30A1Q9Y6M5 507 aa5.95□□□□□ -1.46
CPSF6-206ENST00000550987 FPGT-TNNI3KV9GXZ4 949 aa5.95□□□□□ -1.46
CPSF6-206ENST00000550987 COL15A1P39059 1388 aa5.94□□□□□ -1.46
CPSF6-206ENST00000550987 NCOR2Q9Y618 2525 aa5.94□□□□□ -1.46
CPSF6-206ENST00000550987 IFT172Q9UG01 1749 aa5.94□□□□□ -1.46
CPSF6-206ENST00000550987 CCDC78A2IDD5 438 aa5.94□□□□□ -1.46
CPSF6-206ENST00000550987 OR2W5A6NFC9 320 aa5.94□□□□□ -1.46
CPSF6-206ENST00000550987 TAF5LO75529 589 aa5.94□□□□□ -1.46
CPSF6-206ENST00000550987 CER1O95813 267 aa5.94□□□□□ -1.46
CPSF6-206ENST00000550987 RBL1P28749 1068 aa5.94□□□□□ -1.46
CPSF6-206ENST00000550987 SERPINA4P29622 427 aa5.94□□□□□ -1.46
CPSF6-206ENST00000550987 ZEB1P37275 1124 aaPredicted RBP5.94□□□□□ -1.46
CPSF6-206ENST00000550987 GSTM5P46439 218 aa5.94□□□□□ -1.46
CPSF6-206ENST00000550987 RABGGTBP53611 331 aa5.94□□□□□ -1.46
CPSF6-206ENST00000550987 VAMP2P63027 116 aa5.94□□□□□ -1.46
CPSF6-206ENST00000550987 OCA2Q04671 838 aa5.94□□□□□ -1.46
CPSF6-206ENST00000550987 SPOCD1Q6ZMY3 1216 aa5.94□□□□□ -1.46
CPSF6-206ENST00000550987 C1orf122Q6ZSJ8 110 aa5.94□□□□□ -1.46
CPSF6-206ENST00000550987 CIR1Q86X95 450 aaPredicted RBP5.94□□□□□ -1.46
CPSF6-206ENST00000550987 ADGRG5Q8IZF4 528 aa5.94□□□□□ -1.46
CPSF6-206ENST00000550987 TMEM132CQ8N3T6 1108 aa5.94□□□□□ -1.46
CPSF6-206ENST00000550987 SYT8Q8NBV8 401 aa5.94□□□□□ -1.46
CPSF6-206ENST00000550987 UCMAQ8WVF2 138 aa5.94□□□□□ -1.46
CPSF6-206ENST00000550987 RRP36Q96EU6 259 aaKnown RBP5.94□□□□□ -1.46
CPSF6-206ENST00000550987 FAM89AQ96GI7 184 aa5.94□□□□□ -1.46
CPSF6-206ENST00000550987 NEUROD6Q96NK8 337 aa5.94□□□□□ -1.46
CPSF6-206ENST00000550987 ASB2Q96Q27 587 aa5.94□□□□□ -1.46
CPSF6-206ENST00000550987 C17orf80Q9BSJ5 609 aa5.94□□□□□ -1.46
CPSF6-206ENST00000550987 TPSD1Q9BZJ3 242 aa5.94□□□□□ -1.46
CPSF6-206ENST00000550987 KCND3Q9UK17 655 aa5.94□□□□□ -1.46
CPSF6-206ENST00000550987 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.94□□□□□ -1.46
CPSF6-206ENST00000550987 TAF1LQ8IZX4 1826 aa5.94□□□□□ -1.46
CPSF6-206ENST00000550987 A0A1W2PS29 197 aa5.93□□□□□ -1.46
CPSF6-206ENST00000550987 KIF28PB7ZC32 967 aa5.93□□□□□ -1.46
CPSF6-206ENST00000550987 PSMD9O00233 223 aa5.93□□□□□ -1.46
CPSF6-206ENST00000550987 FOXS1O43638 330 aa5.93□□□□□ -1.46
CPSF6-206ENST00000550987 LARGE1O95461 756 aa5.93□□□□□ -1.46
CPSF6-206ENST00000550987 CSF1RP07333 972 aa5.93□□□□□ -1.46
CPSF6-206ENST00000550987 MMP10P09238 476 aa5.93□□□□□ -1.46
CPSF6-206ENST00000550987 CD19P15391 556 aa5.93□□□□□ -1.46
CPSF6-206ENST00000550987 EPHX2P34913 555 aa5.93□□□□□ -1.46
CPSF6-206ENST00000550987 LIFRP42702 1097 aa5.93□□□□□ -1.46
CPSF6-206ENST00000550987 RXRGP48443 463 aa5.93□□□□□ -1.46
CPSF6-206ENST00000550987 CHRNDQ07001 517 aa5.93□□□□□ -1.46
CPSF6-206ENST00000550987 NAIF1Q69YI7 327 aaPredicted RBP5.93□□□□□ -1.46
CPSF6-206ENST00000550987 MZT2BQ6NZ67 158 aa5.93□□□□□ -1.46
CPSF6-206ENST00000550987 GDF7Q7Z4P5 450 aa5.93□□□□□ -1.46
CPSF6-206ENST00000550987 IZUMO1Q8IYV9 350 aa5.93□□□□□ -1.46
CPSF6-206ENST00000550987 ABRAQ8N0Z2 381 aa5.93□□□□□ -1.46
CPSF6-206ENST00000550987 CCDC89Q8N998 374 aa5.93□□□□□ -1.46
CPSF6-206ENST00000550987 SUN3Q8TAQ9 357 aa5.93□□□□□ -1.46
CPSF6-206ENST00000550987 FAM136AQ96C01 138 aa5.93□□□□□ -1.46
CPSF6-206ENST00000550987 DPCDQ9BVM2 203 aaPredicted RBP5.93□□□□□ -1.46
CPSF6-206ENST00000550987 GPR63Q9BZJ6 419 aa5.93□□□□□ -1.46
CPSF6-206ENST00000550987 CCDC134Q9H6E4 229 aa5.93□□□□□ -1.46
CPSF6-206ENST00000550987 PREBQ9HCU5 417 aa5.93□□□□□ -1.46
CPSF6-206ENST00000550987 LIN7CQ9NUP9 197 aaKnown RBP5.93□□□□□ -1.46
CPSF6-206ENST00000550987 PPP4R1LQ9P1A2 415 aa5.93□□□□□ -1.46
CPSF6-206ENST00000550987 NKX1-2Q9UD57 310 aaPredicted RBP5.93□□□□□ -1.46
CPSF6-206ENST00000550987 KCNE5Q9UJ90 142 aa5.93□□□□□ -1.46
CPSF6-206ENST00000550987 CCNL1Q9UK58 526 aaPredicted RBP5.93□□□□□ -1.46
CPSF6-206ENST00000550987 CNTN6Q9UQ52 1028 aa5.93□□□□□ -1.46
CPSF6-206ENST00000550987 SSX2IPQ9Y2D8 614 aa5.93□□□□□ -1.46
CPSF6-206ENST00000550987 SLC27A6Q9Y2P4 619 aa5.93□□□□□ -1.46
CPSF6-206ENST00000550987 AFG3L2Q9Y4W6 797 aa5.93□□□□□ -1.46
CPSF6-206ENST00000550987 RNF114Q9Y508 228 aa5.93□□□□□ -1.46
CPSF6-206ENST00000550987 DUSP10Q9Y6W6 482 aa5.93□□□□□ -1.46
CPSF6-206ENST00000550987 LTN1O94822 1766 aa5.93□□□□□ -1.46
CPSF6-206ENST00000550987 RPP40O75818 363 aaKnown RBP5.92□□□□□ -1.46
CPSF6-206ENST00000550987 BAIAP3O94812 1187 aa5.92□□□□□ -1.46
CPSF6-206ENST00000550987 ZSCAN22P10073 491 aaPredicted RBP5.92□□□□□ -1.46
CPSF6-206ENST00000550987 CPA1P15085 419 aa5.92□□□□□ -1.46
CPSF6-206ENST00000550987 COMTP21964 271 aa5.92□□□□□ -1.46
CPSF6-206ENST00000550987 CXADRP78310 365 aa5.92□□□□□ -1.46
CPSF6-206ENST00000550987 ADAM17P78536 824 aa5.92□□□□□ -1.46
CPSF6-206ENST00000550987 SF3A3Q12874 501 aaKnown RBP eCLIP5.92□□□□□ -1.466e-6■■■□□ 15.2
CPSF6-206ENST00000550987 LY6KQ17RY6 165 aa5.92□□□□□ -1.46
CPSF6-206ENST00000550987 HS1BP3Q53T59 392 aa5.92□□□□□ -1.46
CPSF6-206ENST00000550987 CCDC30Q5VVM6 783 aa5.92□□□□□ -1.46
CPSF6-206ENST00000550987 C1QL3Q5VWW1 255 aa5.92□□□□□ -1.46
CPSF6-206ENST00000550987 Q6ZRM9 215 aa5.92□□□□□ -1.46
CPSF6-206ENST00000550987 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.92□□□□□ -1.46
CPSF6-206ENST00000550987 TDHQ8IZJ6 230 aa5.92□□□□□ -1.46
CPSF6-206ENST00000550987 PDILTQ8N807 584 aa5.92□□□□□ -1.46
CPSF6-206ENST00000550987 OSBPL9Q96SU4 736 aa5.92□□□□□ -1.46
CPSF6-206ENST00000550987 ACTRT3Q9BYD9 372 aa5.92□□□□□ -1.46
CPSF6-206ENST00000550987 AMBRA1Q9C0C7 1298 aa5.92□□□□□ -1.46
CPSF6-206ENST00000550987 TWSG1Q9GZX9 223 aa5.92□□□□□ -1.46
CPSF6-206ENST00000550987 GALNT9Q9HCQ5 603 aa5.92□□□□□ -1.46
CPSF6-206ENST00000550987 FSCN3Q9NQT6 498 aa5.92□□□□□ -1.46
CPSF6-206ENST00000550987 OLA1Q9NTK5 396 aaKnown RBP5.92□□□□□ -1.46
CPSF6-206ENST00000550987 STEAP1Q9UHE8 339 aa5.92□□□□□ -1.46
CPSF6-206ENST00000550987 HACL1Q9UJ83 578 aa5.92□□□□□ -1.46
CPSF6-206ENST00000550987 MAP3K2Q9Y2U5 619 aa5.92□□□□□ -1.46
CPSF6-206ENST00000550987 SNX14Q9Y5W7 946 aa5.92□□□□□ -1.46
CPSF6-206ENST00000550987 PTPN13Q12923 2485 aa5.92□□□□□ -1.46
CPSF6-206ENST00000550987 XDHP47989 1333 aa5.92□□□□□ -1.46
CPSF6-206ENST00000550987 MYO15AQ9UKN7 3530 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms