RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 LRRC63Q05C16 580 aa24.05■■□□□ 1.44
SMARCD1-209ENST00000550477 SFSWAPQ12872 951 aaKnown RBP24.05■■□□□ 1.44
SMARCD1-209ENST00000550477 STILQ15468 1287 aa24.05■■□□□ 1.44
SMARCD1-209ENST00000550477 TTC31Q49AM3 519 aaPredicted RBP24.05■■□□□ 1.44
SMARCD1-209ENST00000550477 CBWD6Q4V339 395 aa24.05■■□□□ 1.44
SMARCD1-209ENST00000550477 COBLL1Q53SF7 1204 aa24.05■■□□□ 1.44
SMARCD1-209ENST00000550477 CBWD3Q5JTY5 395 aa24.05■■□□□ 1.44
SMARCD1-209ENST00000550477 CBWD5Q5RIA9 395 aa24.05■■□□□ 1.44
SMARCD1-209ENST00000550477 MPP7Q5T2T1 576 aa24.05■■□□□ 1.44
SMARCD1-209ENST00000550477 NUGGCQ68CJ6 796 aa24.05■■□□□ 1.44
SMARCD1-209ENST00000550477 FAM124AQ86V42 546 aa24.05■■□□□ 1.44
SMARCD1-209ENST00000550477 CACUL1Q86Y37 369 aa24.05■■□□□ 1.44
SMARCD1-209ENST00000550477 ENGASEQ8NFI3 743 aa24.05■■□□□ 1.44
SMARCD1-209ENST00000550477 NDRG1Q92597 394 aaKnown RBP24.05■■□□□ 1.44
SMARCD1-209ENST00000550477 CDC6Q99741 560 aa24.05■■□□□ 1.44
SMARCD1-209ENST00000550477 DDX50Q9BQ39 737 aaKnown RBP24.05■■□□□ 1.44
SMARCD1-209ENST00000550477 BTBD1Q9H0C5 482 aa24.05■■□□□ 1.44
SMARCD1-209ENST00000550477 GOLPH3LQ9H4A5 285 aa24.05■■□□□ 1.44
SMARCD1-209ENST00000550477 TM7SF3Q9NS93 570 aa24.05■■□□□ 1.44
SMARCD1-209ENST00000550477 YJEFN3A6XGL0 299 aa24.04■■□□□ 1.44
SMARCD1-209ENST00000550477 E7ENQ6 273 aa24.04■■□□□ 1.44
SMARCD1-209ENST00000550477 TULP2O00295 520 aa24.04■■□□□ 1.44
SMARCD1-209ENST00000550477 IRAK2O43187 625 aa24.04■■□□□ 1.44
SMARCD1-209ENST00000550477 PAEPP09466 180 aa24.04■■□□□ 1.44
SMARCD1-209ENST00000550477 PABPC1P11940 636 aaKnown RBP24.04■■□□□ 1.44
SMARCD1-209ENST00000550477 LCP1P13796 627 aa24.04■■□□□ 1.44
SMARCD1-209ENST00000550477 POLR2EP19388 210 aaKnown RBP24.04■■□□□ 1.44
SMARCD1-209ENST00000550477 HLA-FP30511 346 aa24.04■■□□□ 1.44
SMARCD1-209ENST00000550477 HLA-BQ31612 363 aa24.04■■□□□ 1.44
SMARCD1-209ENST00000550477 TMEM215Q68D42 235 aa24.04■■□□□ 1.44
SMARCD1-209ENST00000550477 GLRX5Q86SX6 157 aa24.04■■□□□ 1.44
SMARCD1-209ENST00000550477 RBBP8NLQ8NC74 664 aaPredicted RBP24.04■■□□□ 1.44
SMARCD1-209ENST00000550477 IRGQQ8WZA9 623 aa24.04■■□□□ 1.44
SMARCD1-209ENST00000550477 TMEM245Q9H330 911 aa24.04■■□□□ 1.44
SMARCD1-209ENST00000550477 ABCB8Q9NUT2 735 aa24.04■■□□□ 1.44
SMARCD1-209ENST00000550477 GGA2Q9UJY4 613 aa24.04■■□□□ 1.44
SMARCD1-209ENST00000550477 NCKAP1Q9Y2A7 1128 aa24.04■■□□□ 1.44
SMARCD1-209ENST00000550477 PCDHGB2Q9Y5G2 931 aa24.04■■□□□ 1.44
SMARCD1-209ENST00000550477 CFAP47Q6ZTR5 3102 aa24.04■■□□□ 1.44
SMARCD1-209ENST00000550477 IGF2RP11717 2491 aa24.04■■□□□ 1.44
SMARCD1-209ENST00000550477 CACNA1GO43497 2377 aa24.03■■□□□ 1.44
SMARCD1-209ENST00000550477 FLRT2O43155 660 aa24.03■■□□□ 1.44
SMARCD1-209ENST00000550477 DLDP09622 509 aaKnown RBP24.03■■□□□ 1.44
SMARCD1-209ENST00000550477 HLA-EP13747 358 aa24.03■■□□□ 1.44
SMARCD1-209ENST00000550477 ST8SIA6P61647 398 aa24.03■■□□□ 1.44
SMARCD1-209ENST00000550477 PNOCQ13519 176 aa24.03■■□□□ 1.44
SMARCD1-209ENST00000550477 ANKRD40Q6AI12 368 aa24.03■■□□□ 1.44
SMARCD1-209ENST00000550477 LCLAT1Q6UWP7 414 aa24.03■■□□□ 1.44
SMARCD1-209ENST00000550477 CYB5D2Q8WUJ1 264 aa24.03■■□□□ 1.44
SMARCD1-209ENST00000550477 KIAA1522Q9P206 1035 aaPredicted RBP24.03■■□□□ 1.44
SMARCD1-209ENST00000550477 RALYQ9UKM9 306 aaKnown RBP24.03■■□□□ 1.44
SMARCD1-209ENST00000550477 PCOLCE2Q9UKZ9 415 aa24.03■■□□□ 1.44
SMARCD1-209ENST00000550477 O00370 1275 aa24.02■■□□□ 1.44
SMARCD1-209ENST00000550477 DAOAP59103 153 aa24.02■■□□□ 1.44
SMARCD1-209ENST00000550477 LRMPQ12912 555 aa24.02■■□□□ 1.44
SMARCD1-209ENST00000550477 MBLAC2Q68D91 279 aa24.02■■□□□ 1.44
SMARCD1-209ENST00000550477 TMEM270Q6UE05 265 aa24.02■■□□□ 1.44
SMARCD1-209ENST00000550477 BHLHA9Q7RTU4 235 aa24.02■■□□□ 1.44
SMARCD1-209ENST00000550477 DDX51Q8N8A6 666 aaKnown RBP eCLIP24.02■■□□□ 1.44
SMARCD1-209ENST00000550477 RHBDD1Q8TEB9 315 aa24.02■■□□□ 1.44
SMARCD1-209ENST00000550477 SMARCE1Q969G3 411 aa24.02■■□□□ 1.44
SMARCD1-209ENST00000550477 NT5C1BQ96P26 610 aa24.02■■□□□ 1.44
SMARCD1-209ENST00000550477 SGK2Q9HBY8 427 aa24.02■■□□□ 1.44
SMARCD1-209ENST00000550477 OSGEPQ9NPF4 335 aa24.02■■□□□ 1.44
SMARCD1-209ENST00000550477 PCDHB4Q9Y5E5 795 aa24.02■■□□□ 1.44
SMARCD1-209ENST00000550477 PSMA7O14818 248 aa24.01■■□□□ 1.43
SMARCD1-209ENST00000550477 TBL1XO60907 577 aa24.01■■□□□ 1.43
SMARCD1-209ENST00000550477 RNASEH1O60930 286 aaKnown RBP24.01■■□□□ 1.43
SMARCD1-209ENST00000550477 SEMA4FO95754 770 aa24.01■■□□□ 1.43
SMARCD1-209ENST00000550477 PPP1R2P41236 205 aa24.01■■□□□ 1.43
SMARCD1-209ENST00000550477 CNGA2Q16280 664 aa24.01■■□□□ 1.43
SMARCD1-209ENST00000550477 SCML1Q9UN30 329 aa24.01■■□□□ 1.43
SMARCD1-209ENST00000550477 FRYQ5TBA9 3013 aa24■■□□□ 1.43
SMARCD1-209ENST00000550477 A0A1B0GVT2 93 aa24■■□□□ 1.43
SMARCD1-209ENST00000550477 MSI1O43347 362 aaKnown RBP24■■□□□ 1.43
SMARCD1-209ENST00000550477 CBFA2T3O75081 653 aa24■■□□□ 1.43
SMARCD1-209ENST00000550477 FBXO21O94952 628 aa24■■□□□ 1.43
SMARCD1-209ENST00000550477 CSNK1EP49674 416 aaKnown RBP24■■□□□ 1.43
SMARCD1-209ENST00000550477 RING1Q06587 406 aa24■■□□□ 1.43
SMARCD1-209ENST00000550477 PIK3R6Q5UE93 754 aa24■■□□□ 1.43
SMARCD1-209ENST00000550477 MSANTD2Q6P1R3 559 aa24■■□□□ 1.43
SMARCD1-209ENST00000550477 ADAT2Q7Z6V5 191 aaKnown RBP24■■□□□ 1.43
SMARCD1-209ENST00000550477 KIAA0907Q7Z7F0 614 aaPredicted RBP24■■□□□ 1.43
SMARCD1-209ENST00000550477 ADIPOR2Q86V24 386 aa24■■□□□ 1.43
SMARCD1-209ENST00000550477 PNPLA1Q8N8W4 532 aa24■■□□□ 1.43
SMARCD1-209ENST00000550477 SLC35C1Q96A29 364 aa24■■□□□ 1.43
SMARCD1-209ENST00000550477 AZIN2Q96A70 460 aa24■■□□□ 1.43
SMARCD1-209ENST00000550477 SKA1Q96BD8 255 aa24■■□□□ 1.43
SMARCD1-209ENST00000550477 HSFY1Q96LI6 401 aa24■■□□□ 1.43
SMARCD1-209ENST00000550477 CCDC86Q9H6F5 360 aaKnown RBP24■■□□□ 1.43
SMARCD1-209ENST00000550477 C6orf106Q9H6K1 298 aaPredicted RBP24■■□□□ 1.43
SMARCD1-209ENST00000550477 GDPD2Q9HCC8 539 aa24■■□□□ 1.43
SMARCD1-209ENST00000550477 PRSS16Q9NQE7 514 aa24■■□□□ 1.43
SMARCD1-209ENST00000550477 LHX6Q9UPM6 363 aa24■■□□□ 1.43
SMARCD1-209ENST00000550477 ZBTB32Q9Y2Y4 487 aaPredicted RBP24■■□□□ 1.43
SMARCD1-209ENST00000550477 LTFP02788 710 aa23.99■■□□□ 1.43
SMARCD1-209ENST00000550477 ACSL1P33121 698 aa23.99■■□□□ 1.43
SMARCD1-209ENST00000550477 GRIA4P48058 902 aa23.99■■□□□ 1.43
SMARCD1-209ENST00000550477 FMO5P49326 533 aa23.99■■□□□ 1.43
SMARCD1-209ENST00000550477 RGS7P49802 495 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms