RNA–Protein interactions for RNA: ENST00000550471.1

GCN1-207, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-207ENST00000550471 NUP62CLQ9H1M0 184 aa20.73■□□□□ 0.91
GCN1-207ENST00000550471 LHX5Q9H2C1 402 aa20.73■□□□□ 0.91
GCN1-207ENST00000550471 GGA2Q9UJY4 613 aa20.73■□□□□ 0.91
GCN1-207ENST00000550471 PCDHGC3Q9UN70 934 aa20.73■□□□□ 0.91
GCN1-207ENST00000550471 GABBR2O75899 941 aa20.72■□□□□ 0.91
GCN1-207ENST00000550471 ASLP04424 464 aa20.72■□□□□ 0.91
GCN1-207ENST00000550471 SERPINF2P08697 491 aa20.72■□□□□ 0.91
GCN1-207ENST00000550471 PABPC1P11940 636 aaKnown RBP20.72■□□□□ 0.91
GCN1-207ENST00000550471 CSRP1P21291 193 aaKnown RBP20.72■□□□□ 0.91
GCN1-207ENST00000550471 PTGER3P43115 390 aa20.72■□□□□ 0.91
GCN1-207ENST00000550471 GFPT1Q06210 699 aaPredicted RBP20.72■□□□□ 0.91
GCN1-207ENST00000550471 FUT11Q495W5 492 aa20.72■□□□□ 0.91
GCN1-207ENST00000550471 EFHC1Q5JVL4 640 aa20.72■□□□□ 0.91
GCN1-207ENST00000550471 TCEAL6Q6IPX3 200 aa20.72■□□□□ 0.91
GCN1-207ENST00000550471 KDM1BQ8NB78 822 aa20.72■□□□□ 0.91
GCN1-207ENST00000550471 DQX1Q8TE96 717 aaKnown RBP20.72■□□□□ 0.91
GCN1-207ENST00000550471 TCEAL3Q969E4 200 aa20.72■□□□□ 0.91
GCN1-207ENST00000550471 SIPA1Q96FS4 1042 aa20.72■□□□□ 0.91
GCN1-207ENST00000550471 CRACR2AQ9BSW2 395 aa20.72■□□□□ 0.91
GCN1-207ENST00000550471 SMOC1Q9H4F8 434 aa20.72■□□□□ 0.91
GCN1-207ENST00000550471 RXFP3Q9NSD7 469 aa20.72■□□□□ 0.91
GCN1-207ENST00000550471 USP36Q9P275 1121 aaKnown RBP20.72■□□□□ 0.91
GCN1-207ENST00000550471 SUN2Q9UH99 717 aa20.72■□□□□ 0.91
GCN1-207ENST00000550471 CYP8B1Q9UNU6 501 aa20.72■□□□□ 0.91
GCN1-207ENST00000550471 RAD54BQ9Y620 910 aa20.72■□□□□ 0.91
GCN1-207ENST00000550471 C4orf47A7E2U8 309 aa20.71■□□□□ 0.91
GCN1-207ENST00000550471 TSPAN3O60637 253 aa20.71■□□□□ 0.91
GCN1-207ENST00000550471 IGLV3-19P01714 112 aa20.71■□□□□ 0.91
GCN1-207ENST00000550471 EPHX1P07099 455 aa20.71■□□□□ 0.91
GCN1-207ENST00000550471 SYPP08247 313 aa20.71■□□□□ 0.91
GCN1-207ENST00000550471 DLDP09622 509 aaKnown RBP20.71■□□□□ 0.91
GCN1-207ENST00000550471 POLR2EP19388 210 aaKnown RBP20.71■□□□□ 0.91
GCN1-207ENST00000550471 SLC9A1P19634 815 aa20.71■□□□□ 0.91
GCN1-207ENST00000550471 PON1P27169 355 aa20.71■□□□□ 0.91
GCN1-207ENST00000550471 HLA-FP30511 346 aa20.71■□□□□ 0.91
GCN1-207ENST00000550471 USP8P40818 1118 aa20.71■□□□□ 0.91
GCN1-207ENST00000550471 ATXN3P54252 364 aaPredicted RBP20.71■□□□□ 0.91
GCN1-207ENST00000550471 OXCT1P55809 520 aa20.71■□□□□ 0.91
GCN1-207ENST00000550471 IRX4P78413 519 aa20.71■□□□□ 0.91
GCN1-207ENST00000550471 DENND1BQ6P3S1 775 aa20.71■□□□□ 0.91
GCN1-207ENST00000550471 CHST9Q7L1S5 443 aa20.71■□□□□ 0.91
GCN1-207ENST00000550471 TMPRSS6Q8IU80 811 aa20.71■□□□□ 0.91
GCN1-207ENST00000550471 IRF2BP1Q8IU81 584 aa20.71■□□□□ 0.91
GCN1-207ENST00000550471 ZDHHC17Q8IUH5 632 aa20.71■□□□□ 0.91
GCN1-207ENST00000550471 OR2T3Q8NH03 318 aa20.71■□□□□ 0.91
GCN1-207ENST00000550471 FIBINQ8TAL6 211 aa20.71■□□□□ 0.91
GCN1-207ENST00000550471 SLC39A13Q96H72 371 aa20.71■□□□□ 0.91
GCN1-207ENST00000550471 BTN2A3PQ96KV6 586 aa20.71■□□□□ 0.91
GCN1-207ENST00000550471 PPP1R9BQ96SB3 815 aa20.71■□□□□ 0.91
GCN1-207ENST00000550471 NUP58Q9BVL2 599 aa20.71■□□□□ 0.91
GCN1-207ENST00000550471 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.71■□□□□ 0.91
GCN1-207ENST00000550471 NCOR2Q9Y618 2525 aa20.71■□□□□ 0.91
GCN1-207ENST00000550471 WASH3PC4AMC7 463 aa20.7■□□□□ 0.9
GCN1-207ENST00000550471 PIK3R2O00459 728 aa20.7■□□□□ 0.9
GCN1-207ENST00000550471 TBL1XO60907 577 aa20.7■□□□□ 0.9
GCN1-207ENST00000550471 MOCS3O95396 460 aa20.7■□□□□ 0.9
GCN1-207ENST00000550471 KRT9P35527 623 aa20.7■□□□□ 0.9
GCN1-207ENST00000550471 PDCLQ13371 301 aa20.7■□□□□ 0.9
GCN1-207ENST00000550471 CAMK2GQ13555 558 aaPredicted RBP20.7■□□□□ 0.9
GCN1-207ENST00000550471 ARHGAP44Q17R89 818 aa20.7■□□□□ 0.9
GCN1-207ENST00000550471 FNDC3BQ53EP0 1204 aaKnown RBP20.7■□□□□ 0.9
GCN1-207ENST00000550471 FAM133BQ5BKY9 247 aaKnown RBP20.7■□□□□ 0.9
GCN1-207ENST00000550471 TTC39BQ5VTQ0 682 aaPredicted RBP20.7■□□□□ 0.9
GCN1-207ENST00000550471 ARMCX6Q7L4S7 300 aa20.7■□□□□ 0.9
GCN1-207ENST00000550471 MFN1Q8IWA4 741 aa20.7■□□□□ 0.9
GCN1-207ENST00000550471 ATP6V0D2Q8N8Y2 350 aa20.7■□□□□ 0.9
GCN1-207ENST00000550471 CLEC4CQ8WTT0 213 aa20.7■□□□□ 0.9
GCN1-207ENST00000550471 P2RY11Q96G91 374 aa20.7■□□□□ 0.9
GCN1-207ENST00000550471 FCRL2Q96LA5 508 aaPredicted RBP20.7■□□□□ 0.9
GCN1-207ENST00000550471 ZDHHC5Q9C0B5 715 aa20.7■□□□□ 0.9
GCN1-207ENST00000550471 NDST4Q9H3R1 872 aa20.7■□□□□ 0.9
GCN1-207ENST00000550471 ABCB8Q9NUT2 735 aa20.7■□□□□ 0.9
GCN1-207ENST00000550471 WSB2Q9NYS7 404 aaPredicted RBP20.7■□□□□ 0.9
GCN1-207ENST00000550471 RRN3Q9NYV6 651 aa20.7■□□□□ 0.9
GCN1-207ENST00000550471 TJP2Q9UDY2 1190 aa20.7■□□□□ 0.9
GCN1-207ENST00000550471 CLEC4EQ9ULY5 219 aa20.7■□□□□ 0.9
GCN1-207ENST00000550471 UPK3BL1B0FP48 263 aa20.69■□□□□ 0.9
GCN1-207ENST00000550471 UPK3BL2E5RIL1 263 aa20.69■□□□□ 0.9
GCN1-207ENST00000550471 E5RJQ4 531 aa20.69■□□□□ 0.9
GCN1-207ENST00000550471 PAPSS1O43252 624 aaPredicted RBP20.69■□□□□ 0.9
GCN1-207ENST00000550471 HSF2BPO75031 334 aa20.69■□□□□ 0.9
GCN1-207ENST00000550471 KCNK5O95279 499 aa20.69■□□□□ 0.9
GCN1-207ENST00000550471 FYNP06241 537 aa20.69■□□□□ 0.9
GCN1-207ENST00000550471 CEACAM1P13688 526 aa20.69■□□□□ 0.9
GCN1-207ENST00000550471 ITPKAP23677 461 aa20.69■□□□□ 0.9
GCN1-207ENST00000550471 EEF1GP26641 437 aaKnown RBP20.69■□□□□ 0.9
GCN1-207ENST00000550471 ST8SIA6P61647 398 aa20.69■□□□□ 0.9
GCN1-207ENST00000550471 CDK17Q00537 523 aa20.69■□□□□ 0.9
GCN1-207ENST00000550471 SLC12A1Q13621 1099 aa20.69■□□□□ 0.9
GCN1-207ENST00000550471 HNRNPDQ14103 355 aaKnown RBP20.69■□□□□ 0.9
GCN1-207ENST00000550471 VWA3BQ502W6 1294 aa20.69■□□□□ 0.9
GCN1-207ENST00000550471 MBLAC2Q68D91 279 aa20.69■□□□□ 0.9
GCN1-207ENST00000550471 FRMD1Q8N878 549 aa20.69■□□□□ 0.9
GCN1-207ENST00000550471 PPP1R13BQ96KQ4 1090 aa20.69■□□□□ 0.9
GCN1-207ENST00000550471 TUBGCP2Q9BSJ2 902 aa20.69■□□□□ 0.9
GCN1-207ENST00000550471 TMEM245Q9H330 911 aa20.69■□□□□ 0.9
GCN1-207ENST00000550471 SLC32A1Q9H598 525 aa20.69■□□□□ 0.9
GCN1-207ENST00000550471 SCML1Q9UN30 329 aa20.69■□□□□ 0.9
GCN1-207ENST00000550471 NAALADL1Q9UQQ1 740 aa20.69■□□□□ 0.9
GCN1-207ENST00000550471 BECN2A8MW95 431 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms