RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 WASHC5Q12768 1159 aa16.18■□□□□ 0.18
RBFOX1-212ENST00000550418 SNX17Q15036 470 aa16.18■□□□□ 0.18
RBFOX1-212ENST00000550418 PERM1Q5SV97 790 aa16.18■□□□□ 0.18
RBFOX1-212ENST00000550418 CACHD1Q5VU97 1274 aa16.18■□□□□ 0.18
RBFOX1-212ENST00000550418 ALLCQ8N6M5 410 aa16.18■□□□□ 0.18
RBFOX1-212ENST00000550418 ATG16L2Q8NAA4 619 aa16.18■□□□□ 0.18
RBFOX1-212ENST00000550418 ELMO3Q96BJ8 720 aa16.18■□□□□ 0.18
RBFOX1-212ENST00000550418 A0A0B4J269 797 aa16.17■□□□□ 0.18
RBFOX1-212ENST00000550418 MAGEB16A2A368 324 aa16.17■□□□□ 0.18
RBFOX1-212ENST00000550418 PIAS1O75925 651 aa16.17■□□□□ 0.18
RBFOX1-212ENST00000550418 HSMCR30P0CW71 290 aa16.17■□□□□ 0.18
RBFOX1-212ENST00000550418 AKT1P31749 480 aa16.17■□□□□ 0.18
RBFOX1-212ENST00000550418 PTPN11Q06124 597 aaPredicted RBP16.17■□□□□ 0.18
RBFOX1-212ENST00000550418 PPP3CAQ08209 521 aa16.17■□□□□ 0.18
RBFOX1-212ENST00000550418 VAC14Q08AM6 782 aa16.17■□□□□ 0.18
RBFOX1-212ENST00000550418 SPANXN2Q5MJ10 180 aa16.17■□□□□ 0.18
RBFOX1-212ENST00000550418 LRRC71Q8N4P6 559 aa16.17■□□□□ 0.18
RBFOX1-212ENST00000550418 PLEKHA8Q96JA3 519 aa16.17■□□□□ 0.18
RBFOX1-212ENST00000550418 TBCBQ99426 244 aa16.17■□□□□ 0.18
RBFOX1-212ENST00000550418 TPRKBQ9Y3C4 175 aa16.17■□□□□ 0.18
RBFOX1-212ENST00000550418 NWD1Q149M9 1564 aa16.17■□□□□ 0.18
RBFOX1-212ENST00000550418 NCAM1P13591 858 aa16.17■□□□□ 0.18
RBFOX1-212ENST00000550418 FECHP22830 423 aa16.17■□□□□ 0.18
RBFOX1-212ENST00000550418 GLRA2P23416 452 aa16.17■□□□□ 0.18
RBFOX1-212ENST00000550418 MGAT1P26572 445 aa16.17■□□□□ 0.18
RBFOX1-212ENST00000550418 RECQLP46063 649 aaPredicted RBP16.17■□□□□ 0.18
RBFOX1-212ENST00000550418 LPCAT4Q643R3 524 aa16.17■□□□□ 0.18
RBFOX1-212ENST00000550418 PQLC1Q8N2U9 271 aa16.17■□□□□ 0.18
RBFOX1-212ENST00000550418 EFCAB3Q8N7B9 438 aa16.17■□□□□ 0.18
RBFOX1-212ENST00000550418 PPP1R10Q96QC0 940 aaKnown RBP16.17■□□□□ 0.18
RBFOX1-212ENST00000550418 TAAR1Q96RJ0 339 aa16.17■□□□□ 0.18
RBFOX1-212ENST00000550418 OSBPL11Q9BXB4 747 aa16.17■□□□□ 0.18
RBFOX1-212ENST00000550418 ARHGEF3Q9NR81 526 aa16.17■□□□□ 0.18
RBFOX1-212ENST00000550418 TUBA8Q9NY65 449 aaPredicted RBP16.17■□□□□ 0.18
RBFOX1-212ENST00000550418 USE1Q9NZ43 259 aa16.17■□□□□ 0.18
RBFOX1-212ENST00000550418 RNF112Q9ULX5 631 aa16.17■□□□□ 0.18
RBFOX1-212ENST00000550418 HBS1LQ9Y450 684 aaKnown RBP16.17■□□□□ 0.18
RBFOX1-212ENST00000550418 RGSL1A5PLK6 1076 aa16.17■□□□□ 0.18
RBFOX1-212ENST00000550418 PRR5-ARHGAP8B1AHC4 643 aa16.17■□□□□ 0.18
RBFOX1-212ENST00000550418 ARHGAP8P85298 464 aa16.17■□□□□ 0.18
RBFOX1-212ENST00000550418 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.17■□□□□ 0.18
RBFOX1-212ENST00000550418 SLFN11Q7Z7L1 901 aa16.17■□□□□ 0.18
RBFOX1-212ENST00000550418 FAM131BQ86XD5 332 aa16.17■□□□□ 0.18
RBFOX1-212ENST00000550418 NAT14Q8WUY8 206 aa16.17■□□□□ 0.18
RBFOX1-212ENST00000550418 UBXN6Q9BZV1 441 aa16.17■□□□□ 0.18
RBFOX1-212ENST00000550418 NMUR2Q9GZQ4 415 aa16.17■□□□□ 0.18
RBFOX1-212ENST00000550418 STN1Q9H668 368 aaKnown RBP16.17■□□□□ 0.18
RBFOX1-212ENST00000550418 EURLQ9NYK6 297 aa16.17■□□□□ 0.18
RBFOX1-212ENST00000550418 FRMPD4Q14CM0 1322 aa16.17■□□□□ 0.18
RBFOX1-212ENST00000550418 C3P01024 1663 aa16.17■□□□□ 0.18
RBFOX1-212ENST00000550418 GOLGA8TH3BQL2 631 aa16.17■□□□□ 0.18
RBFOX1-212ENST00000550418 TSC22D2O75157 780 aa16.17■□□□□ 0.18
RBFOX1-212ENST00000550418 KHDC1Q4VXA5 237 aaKnown RBP16.17■□□□□ 0.18
RBFOX1-212ENST00000550418 TLK2Q86UE8 772 aa16.17■□□□□ 0.18
RBFOX1-212ENST00000550418 EFHBQ8N7U6 833 aa16.17■□□□□ 0.18
RBFOX1-212ENST00000550418 PHF21BQ96EK2 531 aa16.17■□□□□ 0.18
RBFOX1-212ENST00000550418 UNKQ9C0B0 810 aaKnown RBP16.17■□□□□ 0.18
RBFOX1-212ENST00000550418 TBKBP1A7MCY6 615 aa16.16■□□□□ 0.18
RBFOX1-212ENST00000550418 TPBGLP0DKB5 382 aa16.16■□□□□ 0.18
RBFOX1-212ENST00000550418 GNL1P36915 607 aaPredicted RBP16.16■□□□□ 0.18
RBFOX1-212ENST00000550418 NAMPTP43490 491 aa16.16■□□□□ 0.18
RBFOX1-212ENST00000550418 CCT8P50990 548 aa16.16■□□□□ 0.18
RBFOX1-212ENST00000550418 PTRHD1Q6GMV3 140 aaKnown RBP16.16■□□□□ 0.18
RBFOX1-212ENST00000550418 CYP2W1Q8TAV3 490 aa16.16■□□□□ 0.18
RBFOX1-212ENST00000550418 TRPC4APQ8TEL6 797 aa16.16■□□□□ 0.18
RBFOX1-212ENST00000550418 RSPH1Q8WYR4 309 aa16.16■□□□□ 0.18
RBFOX1-212ENST00000550418 BORCS5Q969J3 196 aa16.16■□□□□ 0.18
RBFOX1-212ENST00000550418 DEPDC7Q96QD5 511 aa16.16■□□□□ 0.18
RBFOX1-212ENST00000550418 S100A14Q9HCY8 104 aa16.16■□□□□ 0.18
RBFOX1-212ENST00000550418 DDIT4Q9NX09 232 aa16.16■□□□□ 0.18
RBFOX1-212ENST00000550418 SAE1Q9UBE0 346 aaPredicted RBP16.16■□□□□ 0.18
RBFOX1-212ENST00000550418 SLC12A4Q9UP95 1085 aa16.16■□□□□ 0.18
RBFOX1-212ENST00000550418 SLC8A2Q9UPR5 921 aa16.16■□□□□ 0.18
RBFOX1-212ENST00000550418 CAMTA1Q9Y6Y1 1673 aa16.16■□□□□ 0.18
RBFOX1-212ENST00000550418 TM7SF2O76062 418 aa16.16■□□□□ 0.18
RBFOX1-212ENST00000550418 CD4P01730 458 aa16.16■□□□□ 0.18
RBFOX1-212ENST00000550418 RPL22P35268 128 aaKnown RBP16.16■□□□□ 0.18
RBFOX1-212ENST00000550418 IL12RB1P42701 662 aa16.16■□□□□ 0.18
RBFOX1-212ENST00000550418 RARRES1P49788 294 aa16.16■□□□□ 0.18
RBFOX1-212ENST00000550418 LPIN1Q14693 890 aa16.16■□□□□ 0.18
RBFOX1-212ENST00000550418 TTC23LQ6PF05 361 aa16.16■□□□□ 0.18
RBFOX1-212ENST00000550418 ZDHHC13Q8IUH4 622 aa16.16■□□□□ 0.18
RBFOX1-212ENST00000550418 C4orf19Q8IY42 314 aa16.16■□□□□ 0.18
RBFOX1-212ENST00000550418 SETD9Q8NE22 299 aa16.16■□□□□ 0.18
RBFOX1-212ENST00000550418 SLITRK1Q96PX8 696 aa16.16■□□□□ 0.18
RBFOX1-212ENST00000550418 RAD21L1Q9H4I0 556 aa16.16■□□□□ 0.18
RBFOX1-212ENST00000550418 WNT7AO00755 349 aa16.16■□□□□ 0.18
RBFOX1-212ENST00000550418 MAP3K13O43283 966 aa16.16■□□□□ 0.18
RBFOX1-212ENST00000550418 PARNO95453 639 aaKnown RBP16.16■□□□□ 0.18
RBFOX1-212ENST00000550418 JCHAINP01591 159 aa16.16■□□□□ 0.18
RBFOX1-212ENST00000550418 NFIAQ12857 509 aa16.16■□□□□ 0.18
RBFOX1-212ENST00000550418 TRAF3Q13114 568 aa16.16■□□□□ 0.18
RBFOX1-212ENST00000550418 NAB1Q13506 487 aa16.16■□□□□ 0.18
RBFOX1-212ENST00000550418 FAM71AQ8IYT1 594 aa16.16■□□□□ 0.18
RBFOX1-212ENST00000550418 GPRASP2Q96D09 838 aa16.16■□□□□ 0.18
RBFOX1-212ENST00000550418 VTA1Q9NP79 307 aa16.16■□□□□ 0.18
RBFOX1-212ENST00000550418 PSMD13Q9UNM6 376 aa16.16■□□□□ 0.18
RBFOX1-212ENST00000550418 PRPF4O43172 522 aaKnown RBP eCLIP16.15■□□□□ 0.18
RBFOX1-212ENST00000550418 TRMUO75648 421 aaKnown RBP16.15■□□□□ 0.18
RBFOX1-212ENST00000550418 FAM86B2P0C5J1 330 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms