RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 BANPQ8N9N5 519 aa14.57□□□□□ -0.08
CACNB3-209ENST00000548860 CEP70Q8NHQ1 597 aa14.57□□□□□ -0.08
CACNB3-209ENST00000548860 DCAKDQ8WVC6 231 aa14.57□□□□□ -0.08
CACNB3-209ENST00000548860 SLC44A1Q8WWI5 657 aa14.57□□□□□ -0.08
CACNB3-209ENST00000548860 ABTB1Q969K4 478 aaPredicted RBP14.57□□□□□ -0.08
CACNB3-209ENST00000548860 MFSD3Q96ES6 412 aa14.57□□□□□ -0.08
CACNB3-209ENST00000548860 ELMO2Q96JJ3 720 aa14.57□□□□□ -0.08
CACNB3-209ENST00000548860 AGAP2Q99490 1192 aa14.57□□□□□ -0.08
CACNB3-209ENST00000548860 TRPV6Q9H1D0 765 aa14.57□□□□□ -0.08
CACNB3-209ENST00000548860 LRMDAQ9H2I8 198 aa14.57□□□□□ -0.08
CACNB3-209ENST00000548860 CPA4Q9UI42 421 aa14.57□□□□□ -0.08
CACNB3-209ENST00000548860 TP73O15350 636 aa14.57□□□□□ -0.08
CACNB3-209ENST00000548860 CILPO75339 1184 aa14.57□□□□□ -0.08
CACNB3-209ENST00000548860 SORBS2O94875 1100 aaKnown RBP14.57□□□□□ -0.08
CACNB3-209ENST00000548860 LMNAP02545 664 aaKnown RBP14.57□□□□□ -0.08
CACNB3-209ENST00000548860 GM2AP17900 193 aa14.57□□□□□ -0.08
CACNB3-209ENST00000548860 CCR10P46092 362 aa14.57□□□□□ -0.08
CACNB3-209ENST00000548860 NSUN2Q08J23 767 aaKnown RBP eCLIP14.57□□□□□ -0.08
CACNB3-209ENST00000548860 PTP4A2Q12974 167 aa14.57□□□□□ -0.08
CACNB3-209ENST00000548860 CTBP1Q13363 440 aa14.57□□□□□ -0.08
CACNB3-209ENST00000548860 NOMO1Q15155 1222 aa14.57□□□□□ -0.08
CACNB3-209ENST00000548860 LRRC38Q5VT99 294 aa14.57□□□□□ -0.08
CACNB3-209ENST00000548860 PDPK2PQ6A1A2 396 aa14.57□□□□□ -0.08
CACNB3-209ENST00000548860 TRIM67Q6ZTA4 783 aa14.57□□□□□ -0.08
CACNB3-209ENST00000548860 RUVBL2Q9Y230 463 aaKnown RBP14.57□□□□□ -0.08
CACNB3-209ENST00000548860 COL5A3P25940 1745 aaPredicted RBP14.57□□□□□ -0.08
CACNB3-209ENST00000548860 NRAPQ86VF7 1730 aa14.57□□□□□ -0.08
CACNB3-209ENST00000548860 A0A096LPK6 155 aa14.57□□□□□ -0.08
CACNB3-209ENST00000548860 USP2O75604 605 aaPredicted RBP14.57□□□□□ -0.08
CACNB3-209ENST00000548860 HPS6Q86YV9 775 aa14.57□□□□□ -0.08
CACNB3-209ENST00000548860 ADGRF2Q8IZF7 708 aa14.57□□□□□ -0.08
CACNB3-209ENST00000548860 DIS3LQ8TF46 1054 aaKnown RBP14.57□□□□□ -0.08
CACNB3-209ENST00000548860 RNF39Q9H2S5 420 aa14.57□□□□□ -0.08
CACNB3-209ENST00000548860 PSAT1Q9Y617 370 aa14.57□□□□□ -0.08
CACNB3-209ENST00000548860 LAMB1P07942 1786 aa14.56□□□□□ -0.08
CACNB3-209ENST00000548860 ATXN2Q99700 1313 aaKnown RBP14.56□□□□□ -0.08
CACNB3-209ENST00000548860 VAPBO95292 243 aa14.56□□□□□ -0.08
CACNB3-209ENST00000548860 GCAP28676 217 aa14.56□□□□□ -0.08
CACNB3-209ENST00000548860 SDHAF4Q5VUM1 108 aa14.56□□□□□ -0.08
CACNB3-209ENST00000548860 TTC30AQ86WT1 665 aa14.56□□□□□ -0.08
CACNB3-209ENST00000548860 SEMA6AQ9H2E6 1030 aa14.56□□□□□ -0.08
CACNB3-209ENST00000548860 TAGLN3Q9UI15 199 aa14.56□□□□□ -0.08
CACNB3-209ENST00000548860 SYNPO2Q9UMS6 1093 aa14.56□□□□□ -0.08
CACNB3-209ENST00000548860 AURKCQ9UQB9 309 aa14.56□□□□□ -0.08
CACNB3-209ENST00000548860 DCAF8L1A6NGE4 600 aa14.56□□□□□ -0.08
CACNB3-209ENST00000548860 MFSD11O43934 449 aa14.56□□□□□ -0.08
CACNB3-209ENST00000548860 NEK3P51956 506 aa14.56□□□□□ -0.08
CACNB3-209ENST00000548860 MRPS22P82650 360 aaKnown RBP14.56□□□□□ -0.08
CACNB3-209ENST00000548860 SLC30A9Q6PML9 568 aa14.56□□□□□ -0.08
CACNB3-209ENST00000548860 CYP2R1Q6VVX0 501 aa14.56□□□□□ -0.08
CACNB3-209ENST00000548860 C15orf39Q6ZRI6 1047 aa14.56□□□□□ -0.08
CACNB3-209ENST00000548860 ILDR2Q71H61 639 aa14.56□□□□□ -0.08
CACNB3-209ENST00000548860 PCDH20Q8N6Y1 951 aaKnown RBP14.56□□□□□ -0.08
CACNB3-209ENST00000548860 MIPEPQ99797 713 aa14.56□□□□□ -0.08
CACNB3-209ENST00000548860 SPON2Q9BUD6 331 aa14.56□□□□□ -0.08
CACNB3-209ENST00000548860 ULBP1Q9BZM6 244 aa14.56□□□□□ -0.08
CACNB3-209ENST00000548860 XYLT2Q9H1B5 865 aa14.56□□□□□ -0.08
CACNB3-209ENST00000548860 NFASCO94856 1347 aa14.56□□□□□ -0.08
CACNB3-209ENST00000548860 COL22A1Q8NFW1 1626 aaPredicted RBP14.56□□□□□ -0.08
CACNB3-209ENST00000548860 UBA6A0AVT1 1052 aaPredicted RBP14.56□□□□□ -0.08
CACNB3-209ENST00000548860 XPO1O14980 1071 aaKnown RBP14.56□□□□□ -0.08
CACNB3-209ENST00000548860 ENDOD1O94919 500 aa14.56□□□□□ -0.08
CACNB3-209ENST00000548860 AMHP03971 560 aa14.56□□□□□ -0.08
CACNB3-209ENST00000548860 SOWAHAQ2M3V2 549 aa14.56□□□□□ -0.08
CACNB3-209ENST00000548860 MIB1Q86YT6 1006 aa14.56□□□□□ -0.08
CACNB3-209ENST00000548860 TREML1Q86YW5 311 aa14.56□□□□□ -0.08
CACNB3-209ENST00000548860 P2RY11Q96G91 374 aa14.56□□□□□ -0.08
CACNB3-209ENST00000548860 AP5M1Q9H0R1 490 aa14.56□□□□□ -0.08
CACNB3-209ENST00000548860 GPRC5DQ9NZD1 345 aa14.56□□□□□ -0.08
CACNB3-209ENST00000548860 ACTL7BQ9Y614 415 aa14.56□□□□□ -0.08
CACNB3-209ENST00000548860 CCL15-CCL14A0A0B4J2E2 113 aa14.55□□□□□ -0.08
CACNB3-209ENST00000548860 PRPF4O43172 522 aaKnown RBP eCLIP14.55□□□□□ -0.08
CACNB3-209ENST00000548860 RPS12P25398 132 aaKnown RBP14.55□□□□□ -0.08
CACNB3-209ENST00000548860 RTP1P59025 263 aa14.55□□□□□ -0.08
CACNB3-209ENST00000548860 MED21Q13503 144 aa14.55□□□□□ -0.08
CACNB3-209ENST00000548860 DBN1Q16643 649 aa14.55□□□□□ -0.08
CACNB3-209ENST00000548860 CCL15Q16663 113 aa14.55□□□□□ -0.08
CACNB3-209ENST00000548860 SLC7A6OSQ96CW6 309 aaPredicted RBP14.55□□□□□ -0.08
CACNB3-209ENST00000548860 RHOBTB2Q9BYZ6 727 aa14.55□□□□□ -0.08
CACNB3-209ENST00000548860 PHACTR1Q9C0D0 580 aa14.55□□□□□ -0.08
CACNB3-209ENST00000548860 BATF3Q9NR55 127 aa14.55□□□□□ -0.08
CACNB3-209ENST00000548860 PPP1R12AO14974 1030 aaPredicted RBP14.55□□□□□ -0.08
CACNB3-209ENST00000548860 PIRTP0C851 137 aa14.55□□□□□ -0.08
CACNB3-209ENST00000548860 TBL3Q12788 808 aaKnown RBP14.55□□□□□ -0.08
CACNB3-209ENST00000548860 SPDYAQ5MJ70 313 aa14.55□□□□□ -0.08
CACNB3-209ENST00000548860 SNX32Q86XE0 403 aa14.55□□□□□ -0.08
CACNB3-209ENST00000548860 EXOC8Q8IYI6 725 aa14.55□□□□□ -0.08
CACNB3-209ENST00000548860 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.55□□□□□ -0.08
CACNB3-209ENST00000548860 KCNK16Q96T55 309 aa14.55□□□□□ -0.08
CACNB3-209ENST00000548860 NDNQ99608 321 aa14.55□□□□□ -0.08
CACNB3-209ENST00000548860 EBNA1BP2Q99848 306 aaKnown RBP14.55□□□□□ -0.08
CACNB3-209ENST00000548860 PDZD7Q9H5P4 517 aa14.55□□□□□ -0.08
CACNB3-209ENST00000548860 SUDS3Q9H7L9 328 aaPredicted RBP14.55□□□□□ -0.08
CACNB3-209ENST00000548860 CDHR5Q9HBB8 845 aa14.55□□□□□ -0.08
CACNB3-209ENST00000548860 TMEM216Q9P0N5 145 aa14.55□□□□□ -0.08
CACNB3-209ENST00000548860 PRG3Q9Y2Y8 225 aaPredicted RBP14.55□□□□□ -0.08
CACNB3-209ENST00000548860 KPNA7A9QM74 516 aa14.55□□□□□ -0.08
CACNB3-209ENST00000548860 MBTD1Q05BQ5 628 aa14.55□□□□□ -0.08
CACNB3-209ENST00000548860 PDK2Q15119 407 aa14.55□□□□□ -0.08
CACNB3-209ENST00000548860 CNGA3Q16281 694 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms