RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 GADD45BO75293 160 aaPredicted RBP18.11■□□□□ 0.49
CHMP1A-205ENST00000548650 FBXO21O94952 628 aa18.11■□□□□ 0.49
CHMP1A-205ENST00000548650 TOP3BO95985 862 aaKnown RBP18.11■□□□□ 0.49
CHMP1A-205ENST00000548650 HLA-EP13747 358 aa18.11■□□□□ 0.49
CHMP1A-205ENST00000548650 SLC6A4P31645 630 aa18.11■□□□□ 0.49
CHMP1A-205ENST00000548650 RPL34P49207 117 aaKnown RBP18.11■□□□□ 0.49
CHMP1A-205ENST00000548650 STX17P56962 302 aa18.11■□□□□ 0.49
CHMP1A-205ENST00000548650 RING1Q06587 406 aa18.11■□□□□ 0.49
CHMP1A-205ENST00000548650 KCNH2Q12809 1159 aa18.11■□□□□ 0.49
CHMP1A-205ENST00000548650 PAK1Q13153 545 aa18.11■□□□□ 0.49
CHMP1A-205ENST00000548650 CAMK2GQ13555 558 aaPredicted RBP18.11■□□□□ 0.49
CHMP1A-205ENST00000548650 WDR45BQ5MNZ6 344 aa18.11■□□□□ 0.49
CHMP1A-205ENST00000548650 SYCP2LQ5T4T6 812 aa18.11■□□□□ 0.49
CHMP1A-205ENST00000548650 NUGGCQ68CJ6 796 aa18.11■□□□□ 0.49
CHMP1A-205ENST00000548650 RFWD3Q6PCD5 774 aa18.11■□□□□ 0.49
CHMP1A-205ENST00000548650 CHST9Q7L1S5 443 aa18.11■□□□□ 0.49
CHMP1A-205ENST00000548650 KIAA0907Q7Z7F0 614 aaPredicted RBP18.11■□□□□ 0.49
CHMP1A-205ENST00000548650 ADIPOR2Q86V24 386 aa18.11■□□□□ 0.49
CHMP1A-205ENST00000548650 RGL4Q8IZJ4 473 aa18.11■□□□□ 0.49
CHMP1A-205ENST00000548650 PRCCQ92733 491 aaPredicted RBP18.11■□□□□ 0.49
CHMP1A-205ENST00000548650 TMA16Q96EY4 203 aaKnown RBP18.11■□□□□ 0.49
CHMP1A-205ENST00000548650 HSFY1Q96LI6 401 aa18.11■□□□□ 0.49
CHMP1A-205ENST00000548650 PRICKLE1Q96MT3 831 aaPredicted RBP18.11■□□□□ 0.49
CHMP1A-205ENST00000548650 GPR174Q9BXC1 333 aa18.11■□□□□ 0.49
CHMP1A-205ENST00000548650 INTS2Q9H0H0 1204 aaKnown RBP18.11■□□□□ 0.49
CHMP1A-205ENST00000548650 TMEM245Q9H330 911 aa18.11■□□□□ 0.49
CHMP1A-205ENST00000548650 DNAAF2Q9NVR5 837 aaKnown RBP18.11■□□□□ 0.49
CHMP1A-205ENST00000548650 CNTN6Q9UQ52 1028 aa18.11■□□□□ 0.49
CHMP1A-205ENST00000548650 NFE2L3Q9Y4A8 694 aa18.11■□□□□ 0.49
CHMP1A-205ENST00000548650 MEI4A8MW99 385 aa18.1■□□□□ 0.49
CHMP1A-205ENST00000548650 OPHN1O60890 802 aa18.1■□□□□ 0.49
CHMP1A-205ENST00000548650 GNA14O95837 355 aa18.1■□□□□ 0.49
CHMP1A-205ENST00000548650 AFPP02771 609 aaKnown RBP18.1■□□□□ 0.49
CHMP1A-205ENST00000548650 FYNP06241 537 aa18.1■□□□□ 0.49
CHMP1A-205ENST00000548650 C7P10643 843 aa18.1■□□□□ 0.49
CHMP1A-205ENST00000548650 PABPC1P11940 636 aaKnown RBP18.1■□□□□ 0.49
CHMP1A-205ENST00000548650 SPINK2P20155 84 aa18.1■□□□□ 0.49
CHMP1A-205ENST00000548650 MAOBP27338 520 aa18.1■□□□□ 0.49
CHMP1A-205ENST00000548650 ARID5AQ03989 594 aa18.1■□□□□ 0.49
CHMP1A-205ENST00000548650 PTPRNQ16849 979 aa18.1■□□□□ 0.49
CHMP1A-205ENST00000548650 PLEKHG6Q3KR16 790 aa18.1■□□□□ 0.49
CHMP1A-205ENST00000548650 NADSYN1Q6IA69 706 aa18.1■□□□□ 0.49
CHMP1A-205ENST00000548650 AHI1Q8N157 1196 aa18.1■□□□□ 0.49
CHMP1A-205ENST00000548650 HDDC3Q8N4P3 179 aa18.1■□□□□ 0.49
CHMP1A-205ENST00000548650 EHBP1Q8NDI1 1231 aa18.1■□□□□ 0.49
CHMP1A-205ENST00000548650 OR2T3Q8NH03 318 aa18.1■□□□□ 0.49
CHMP1A-205ENST00000548650 DQX1Q8TE96 717 aaKnown RBP18.1■□□□□ 0.49
CHMP1A-205ENST00000548650 CYB5D2Q8WUJ1 264 aa18.1■□□□□ 0.49
CHMP1A-205ENST00000548650 DNASE2BQ8WZ79 361 aa18.1■□□□□ 0.49
CHMP1A-205ENST00000548650 TMEM121BQ9BXQ6 578 aaPredicted RBP18.1■□□□□ 0.49
CHMP1A-205ENST00000548650 IRX2Q9BZI1 471 aaPredicted RBP18.1■□□□□ 0.49
CHMP1A-205ENST00000548650 SLC32A1Q9H598 525 aa18.1■□□□□ 0.49
CHMP1A-205ENST00000548650 AKAP13Q12802 2813 aa18.1■□□□□ 0.49
CHMP1A-205ENST00000548650 TP53BP1Q12888 1972 aaPredicted RBP18.1■□□□□ 0.49
CHMP1A-205ENST00000548650 ZFHX4Q86UP3 3567 aa18.09■□□□□ 0.49
CHMP1A-205ENST00000548650 GOLGA6L7A0A1B0GV03 622 aa18.09■□□□□ 0.49
CHMP1A-205ENST00000548650 SPAARA0A1B0GVQ0 90 aa18.09■□□□□ 0.49
CHMP1A-205ENST00000548650 ACSL4O60488 711 aa18.09■□□□□ 0.49
CHMP1A-205ENST00000548650 GJB3O75712 270 aa18.09■□□□□ 0.49
CHMP1A-205ENST00000548650 SYPP08247 313 aa18.09■□□□□ 0.49
CHMP1A-205ENST00000548650 CD59P13987 128 aa18.09■□□□□ 0.49
CHMP1A-205ENST00000548650 CD70P32970 193 aa18.09■□□□□ 0.49
CHMP1A-205ENST00000548650 TBX4P57082 545 aa18.09■□□□□ 0.49
CHMP1A-205ENST00000548650 GRIK2Q13002 908 aa18.09■□□□□ 0.49
CHMP1A-205ENST00000548650 FNDC3BQ53EP0 1204 aaKnown RBP18.09■□□□□ 0.49
CHMP1A-205ENST00000548650 MPP7Q5T2T1 576 aa18.09■□□□□ 0.49
CHMP1A-205ENST00000548650 PIK3R6Q5UE93 754 aa18.09■□□□□ 0.49
CHMP1A-205ENST00000548650 ZCCHC9Q8N567 271 aaKnown RBP18.09■□□□□ 0.49
CHMP1A-205ENST00000548650 ZNF366Q8N895 744 aa18.09■□□□□ 0.49
CHMP1A-205ENST00000548650 CADM4Q8NFZ8 388 aa18.09■□□□□ 0.49
CHMP1A-205ENST00000548650 GOLGA1Q92805 767 aa18.09■□□□□ 0.49
CHMP1A-205ENST00000548650 FCRL2Q96LA5 508 aaPredicted RBP18.09■□□□□ 0.49
CHMP1A-205ENST00000548650 ADAM33Q9BZ11 813 aa18.09■□□□□ 0.49
CHMP1A-205ENST00000548650 MIS12Q9H081 205 aa18.09■□□□□ 0.49
CHMP1A-205ENST00000548650 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.09■□□□□ 0.49
CHMP1A-205ENST00000548650 C1QTNF9BB2RNN3 333 aa18.08■□□□□ 0.48
CHMP1A-205ENST00000548650 IRAK2O43187 625 aa18.08■□□□□ 0.48
CHMP1A-205ENST00000548650 TBL1XO60907 577 aa18.08■□□□□ 0.48
CHMP1A-205ENST00000548650 C1QTNF9P0C862 333 aa18.08■□□□□ 0.48
CHMP1A-205ENST00000548650 GNSP15586 552 aa18.08■□□□□ 0.48
CHMP1A-205ENST00000548650 OXTRP30559 389 aa18.08■□□□□ 0.48
CHMP1A-205ENST00000548650 GPD2P43304 727 aa18.08■□□□□ 0.48
CHMP1A-205ENST00000548650 SLC11A2P49281 568 aa18.08■□□□□ 0.48
CHMP1A-205ENST00000548650 NNTQ13423 1086 aa18.08■□□□□ 0.48
CHMP1A-205ENST00000548650 MEA1Q16626 185 aa18.08■□□□□ 0.48
CHMP1A-205ENST00000548650 DCAF12L1Q5VU92 463 aa18.08■□□□□ 0.48
CHMP1A-205ENST00000548650 MBLAC2Q68D91 279 aa18.08■□□□□ 0.48
CHMP1A-205ENST00000548650 DENND1BQ6P3S1 775 aa18.08■□□□□ 0.48
CHMP1A-205ENST00000548650 UNQ6494/PRO21346Q6UXR6 183 aa18.08■□□□□ 0.48
CHMP1A-205ENST00000548650 UNC45BQ8IWX7 931 aa18.08■□□□□ 0.48
CHMP1A-205ENST00000548650 HJURPQ8NCD3 748 aaPredicted RBP18.08■□□□□ 0.48
CHMP1A-205ENST00000548650 AZIN2Q96A70 460 aa18.08■□□□□ 0.48
CHMP1A-205ENST00000548650 MYEOVQ96EZ4 313 aa18.08■□□□□ 0.48
CHMP1A-205ENST00000548650 LMLNQ96KR4 655 aa18.08■□□□□ 0.48
CHMP1A-205ENST00000548650 SERPINB11Q96P15 392 aa18.08■□□□□ 0.48
CHMP1A-205ENST00000548650 LHX5Q9H2C1 402 aa18.08■□□□□ 0.48
CHMP1A-205ENST00000548650 CHD6Q8TD26 2715 aa18.08■□□□□ 0.48
CHMP1A-205ENST00000548650 TMEM131Q92545 1883 aa18.07■□□□□ 0.48
CHMP1A-205ENST00000548650 A0A1B0GTW7 788 aa18.07■□□□□ 0.48
CHMP1A-205ENST00000548650 METTL12A8MUP2 240 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms