RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 FARP1Q9Y4F1 1045 aaPredicted RBP12.35□□□□□ -0.43
CCDC38-202ENST00000546386 DOCK6Q96HP0 2047 aa12.35□□□□□ -0.43
CCDC38-202ENST00000546386 NDUFAB1O14561 156 aa12.35□□□□□ -0.43
CCDC38-202ENST00000546386 NUDT17P0C025 328 aa12.35□□□□□ -0.43
CCDC38-202ENST00000546386 PSMB4P28070 264 aa12.35□□□□□ -0.43
CCDC38-202ENST00000546386 DEFB103AP81534 67 aa12.35□□□□□ -0.43
CCDC38-202ENST00000546386 DSC1Q08554 894 aa12.35□□□□□ -0.43
CCDC38-202ENST00000546386 PLEKHG4Q58EX7 1191 aa12.35□□□□□ -0.43
CCDC38-202ENST00000546386 TRMT10BQ6PF06 316 aaKnown RBP12.35□□□□□ -0.43
CCDC38-202ENST00000546386 LRIG3Q6UXM1 1119 aa12.35□□□□□ -0.43
CCDC38-202ENST00000546386 PID1Q7Z2X4 250 aa12.35□□□□□ -0.43
CCDC38-202ENST00000546386 C14orf80Q86SX3 495 aa12.35□□□□□ -0.43
CCDC38-202ENST00000546386 ZDHHC17Q8IUH5 632 aa12.35□□□□□ -0.43
CCDC38-202ENST00000546386 TTC13Q8NBP0 860 aa12.35□□□□□ -0.43
CCDC38-202ENST00000546386 RUNDC3BQ96NL0 473 aa12.35□□□□□ -0.43
CCDC38-202ENST00000546386 MARCH5Q9NX47 278 aa12.35□□□□□ -0.43
CCDC38-202ENST00000546386 VANGL2Q9ULK5 521 aa12.35□□□□□ -0.43
CCDC38-202ENST00000546386 MUC3AQ02505 3323 aa12.35□□□□□ -0.43
CCDC38-202ENST00000546386 TMEM120BA0PK00 339 aa12.34□□□□□ -0.43
CCDC38-202ENST00000546386 CXorf49A8MYA2 514 aaPredicted RBP12.34□□□□□ -0.43
CCDC38-202ENST00000546386 RASA4BC9J798 803 aa12.34□□□□□ -0.43
CCDC38-202ENST00000546386 RNF103O00237 685 aa12.34□□□□□ -0.43
CCDC38-202ENST00000546386 RASA4O43374 803 aa12.34□□□□□ -0.43
CCDC38-202ENST00000546386 DAB1O75553 588 aa12.34□□□□□ -0.43
CCDC38-202ENST00000546386 GJB3O75712 270 aa12.34□□□□□ -0.43
CCDC38-202ENST00000546386 SNX16P57768 344 aa12.34□□□□□ -0.43
CCDC38-202ENST00000546386 NKX3-2P78367 333 aa12.34□□□□□ -0.43
CCDC38-202ENST00000546386 CENPUQ71F23 418 aa12.34□□□□□ -0.43
CCDC38-202ENST00000546386 EIF1ADQ8N9N8 165 aaKnown RBP12.34□□□□□ -0.43
CCDC38-202ENST00000546386 ZNF419Q96HQ0 510 aaPredicted RBP12.34□□□□□ -0.43
CCDC38-202ENST00000546386 SERPINB12Q96P63 405 aa12.34□□□□□ -0.43
CCDC38-202ENST00000546386 PKMYT1Q99640 499 aa12.34□□□□□ -0.43
CCDC38-202ENST00000546386 CCSER2Q9H7U1 834 aa12.34□□□□□ -0.43
CCDC38-202ENST00000546386 CNGB3Q9NQW8 809 aa12.34□□□□□ -0.43
CCDC38-202ENST00000546386 PHF24Q9UPV7 400 aa12.34□□□□□ -0.43
CCDC38-202ENST00000546386 ACTL7AQ9Y615 435 aa12.34□□□□□ -0.43
CCDC38-202ENST00000546386 USP3Q9Y6I4 520 aa12.34□□□□□ -0.43
CCDC38-202ENST00000546386 GOLGA6L7A0A1B0GV03 622 aa12.34□□□□□ -0.43
CCDC38-202ENST00000546386 DNM1LO00429 736 aa12.34□□□□□ -0.43
CCDC38-202ENST00000546386 EIF3HO15372 352 aaKnown RBP eCLIP12.34□□□□□ -0.43
CCDC38-202ENST00000546386 OR1D2P34982 312 aa12.34□□□□□ -0.43
CCDC38-202ENST00000546386 BMPR2Q13873 1038 aa12.34□□□□□ -0.43
CCDC38-202ENST00000546386 PSMD5Q16401 504 aa12.34□□□□□ -0.43
CCDC38-202ENST00000546386 RAB41Q5JT25 222 aa12.34□□□□□ -0.43
CCDC38-202ENST00000546386 KDM7AQ6ZMT4 941 aa12.34□□□□□ -0.43
CCDC38-202ENST00000546386 ARHGEF18Q6ZSZ5 1173 aa12.34□□□□□ -0.43
CCDC38-202ENST00000546386 CFAP52Q8N1V2 620 aa12.34□□□□□ -0.43
CCDC38-202ENST00000546386 SLC43A3Q8NBI5 491 aa12.34□□□□□ -0.43
CCDC38-202ENST00000546386 SPDYE1Q8NFV5 336 aaPredicted RBP12.34□□□□□ -0.43
CCDC38-202ENST00000546386 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.34□□□□□ -0.43
CCDC38-202ENST00000546386 KCTD13Q8WZ19 329 aa12.34□□□□□ -0.43
CCDC38-202ENST00000546386 MYEOVQ96EZ4 313 aa12.34□□□□□ -0.43
CCDC38-202ENST00000546386 ZNF670Q9BS34 389 aa12.34□□□□□ -0.43
CCDC38-202ENST00000546386 TMEM39AQ9NV64 488 aa12.34□□□□□ -0.43
CCDC38-202ENST00000546386 TMEM161AQ9NX61 479 aa12.34□□□□□ -0.43
CCDC38-202ENST00000546386 SLC12A6Q9UHW9 1150 aa12.34□□□□□ -0.43
CCDC38-202ENST00000546386 EOMESO95936 686 aa12.33□□□□□ -0.43
CCDC38-202ENST00000546386 GALTP07902 379 aa12.33□□□□□ -0.43
CCDC38-202ENST00000546386 BRAFP15056 766 aa12.33□□□□□ -0.43
CCDC38-202ENST00000546386 PTPN7P35236 360 aa12.33□□□□□ -0.43
CCDC38-202ENST00000546386 RPL34P49207 117 aaKnown RBP12.33□□□□□ -0.43
CCDC38-202ENST00000546386 TAF10Q12962 218 aa12.33□□□□□ -0.43
CCDC38-202ENST00000546386 MORF4L2Q15014 288 aa12.33□□□□□ -0.43
CCDC38-202ENST00000546386 KBTBD12Q3ZCT8 623 aa12.33□□□□□ -0.43
CCDC38-202ENST00000546386 RASIP1Q5U651 963 aa12.33□□□□□ -0.43
CCDC38-202ENST00000546386 FUT10Q6P4F1 479 aa12.33□□□□□ -0.43
CCDC38-202ENST00000546386 DRICH1Q6PGQ1 229 aaPredicted RBP12.33□□□□□ -0.43
CCDC38-202ENST00000546386 SLC39A5Q6ZMH5 540 aa12.33□□□□□ -0.43
CCDC38-202ENST00000546386 SYDE1Q6ZW31 735 aaPredicted RBP12.33□□□□□ -0.43
CCDC38-202ENST00000546386 TRMT10CQ7L0Y3 403 aaKnown RBP12.33□□□□□ -0.43
CCDC38-202ENST00000546386 STRADAQ7RTN6 431 aa12.33□□□□□ -0.43
CCDC38-202ENST00000546386 OTOP3Q7RTS5 596 aa12.33□□□□□ -0.43
CCDC38-202ENST00000546386 SPRED2Q7Z698 418 aa12.33□□□□□ -0.43
CCDC38-202ENST00000546386 CAND1Q86VP6 1230 aaKnown RBP12.33□□□□□ -0.43
CCDC38-202ENST00000546386 HOOK3Q86VS8 718 aa12.33□□□□□ -0.43
CCDC38-202ENST00000546386 PDIK1LQ8N165 341 aa12.33□□□□□ -0.43
CCDC38-202ENST00000546386 COLGALT1Q8NBJ5 622 aa12.33□□□□□ -0.43
CCDC38-202ENST00000546386 SPATA22Q8NHS9 363 aa12.33□□□□□ -0.43
CCDC38-202ENST00000546386 TFB1MQ8WVM0 346 aaKnown RBP12.33□□□□□ -0.43
CCDC38-202ENST00000546386 HTR3CQ8WXA8 447 aa12.33□□□□□ -0.43
CCDC38-202ENST00000546386 ATP2A3Q93084 1043 aa12.33□□□□□ -0.43
CCDC38-202ENST00000546386 SLC2A13Q96QE2 648 aa12.33□□□□□ -0.43
CCDC38-202ENST00000546386 FBXW11Q9UKB1 542 aa12.33□□□□□ -0.43
CCDC38-202ENST00000546386 PAGE1O75459 146 aa12.33□□□□□ -0.44
CCDC38-202ENST00000546386 ALDH7A1P49419 539 aaKnown RBP12.33□□□□□ -0.44
CCDC38-202ENST00000546386 ANKRD20A2Q5SQ80 823 aa12.33□□□□□ -0.44
CCDC38-202ENST00000546386 ANKRD20A1Q5TYW2 823 aa12.33□□□□□ -0.44
CCDC38-202ENST00000546386 ANKRD20A3Q5VUR7 823 aa12.33□□□□□ -0.44
CCDC38-202ENST00000546386 DYDC1Q8WWB3 177 aa12.33□□□□□ -0.44
CCDC38-202ENST00000546386 NT5C3BQ969T7 300 aa12.33□□□□□ -0.44
CCDC38-202ENST00000546386 FCRL2Q96LA5 508 aaPredicted RBP12.33□□□□□ -0.44
CCDC38-202ENST00000546386 XPO6Q96QU8 1125 aaKnown RBP12.33□□□□□ -0.44
CCDC38-202ENST00000546386 PAK6Q9NQU5 681 aaPredicted RBP12.33□□□□□ -0.44
CCDC38-202ENST00000546386 ZMYND8Q9ULU4 1186 aaPredicted RBP12.33□□□□□ -0.44
CCDC38-202ENST00000546386 VWA8A3KMH1 1905 aa12.33□□□□□ -0.44
CCDC38-202ENST00000546386 WDR27A2RRH5 827 aa12.32□□□□□ -0.44
CCDC38-202ENST00000546386 TNFRSF10BO14763 440 aa12.32□□□□□ -0.44
CCDC38-202ENST00000546386 VNN2O95498 520 aa12.32□□□□□ -0.44
CCDC38-202ENST00000546386 MT-CYBP00156 380 aaPredicted RBP12.32□□□□□ -0.44
CCDC38-202ENST00000546386 JCHAINP01591 159 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms