RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 EIF2AQ9BY44 585 aaKnown RBP16.28■□□□□ 0.2
LDLR-204ENST00000545707 PAPPA2Q9BXP8 1791 aa16.27■□□□□ 0.2
LDLR-204ENST00000545707 A0A0G2JLL6 359 aaPredicted RBP16.27■□□□□ 0.2
LDLR-204ENST00000545707 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.27■□□□□ 0.2
LDLR-204ENST00000545707 BIRC5O15392 142 aa16.27■□□□□ 0.2
LDLR-204ENST00000545707 MFSD11O43934 449 aa16.27■□□□□ 0.2
LDLR-204ENST00000545707 SERPINA6P08185 405 aa16.27■□□□□ 0.2
LDLR-204ENST00000545707 UBTFL6P0CB48 400 aaPredicted RBP16.27■□□□□ 0.2
LDLR-204ENST00000545707 MLH1P40692 756 aa16.27■□□□□ 0.2
LDLR-204ENST00000545707 ABCG1P45844 678 aa16.27■□□□□ 0.2
LDLR-204ENST00000545707 SERPINB9P50453 376 aa16.27■□□□□ 0.2
LDLR-204ENST00000545707 WASHC5Q12768 1159 aa16.27■□□□□ 0.2
LDLR-204ENST00000545707 TUBB3Q13509 450 aa16.27■□□□□ 0.2
LDLR-204ENST00000545707 DPY19L2Q6NUT2 758 aa16.27■□□□□ 0.2
LDLR-204ENST00000545707 IRGCQ6NXR0 463 aa16.27■□□□□ 0.2
LDLR-204ENST00000545707 MAVSQ7Z434 540 aa16.27■□□□□ 0.2
LDLR-204ENST00000545707 PRRT2Q7Z6L0 340 aaPredicted RBP16.27■□□□□ 0.2
LDLR-204ENST00000545707 LINC01465Q8N7H1 131 aa16.27■□□□□ 0.2
LDLR-204ENST00000545707 ARNTL2Q8WYA1 636 aa16.27■□□□□ 0.2
LDLR-204ENST00000545707 ZNF212Q9UDV6 495 aa16.27■□□□□ 0.2
LDLR-204ENST00000545707 ARHGAP42A6NI28 874 aa16.27■□□□□ 0.19
LDLR-204ENST00000545707 CIB2O75838 187 aa16.27■□□□□ 0.19
LDLR-204ENST00000545707 SLC25A27O95847 323 aa16.27■□□□□ 0.19
LDLR-204ENST00000545707 PDE1BQ01064 536 aa16.27■□□□□ 0.19
LDLR-204ENST00000545707 MTHFD1LQ6UB35 978 aa16.27■□□□□ 0.19
LDLR-204ENST00000545707 ARMCX2Q7L311 632 aa16.27■□□□□ 0.19
LDLR-204ENST00000545707 CCNYQ8ND76 341 aa16.27■□□□□ 0.19
LDLR-204ENST00000545707 PIWIL2Q8TC59 973 aaKnown RBP16.27■□□□□ 0.19
LDLR-204ENST00000545707 ZNF184Q99676 751 aaPredicted RBP16.27■□□□□ 0.19
LDLR-204ENST00000545707 C11orf84Q9BUA3 381 aaPredicted RBP16.27■□□□□ 0.19
LDLR-204ENST00000545707 A0A088AWK7 358 aa16.26■□□□□ 0.19
LDLR-204ENST00000545707 PLIN3O60664 434 aa16.26■□□□□ 0.19
LDLR-204ENST00000545707 USP12O75317 370 aa16.26■□□□□ 0.19
LDLR-204ENST00000545707 PRKCGP05129 697 aa16.26■□□□□ 0.19
LDLR-204ENST00000545707 GSTA2P09210 222 aa16.26■□□□□ 0.19
LDLR-204ENST00000545707 PSMB4P28070 264 aa16.26■□□□□ 0.19
LDLR-204ENST00000545707 CPOXP36551 454 aa16.26■□□□□ 0.19
LDLR-204ENST00000545707 ACTR3P61158 418 aa16.26■□□□□ 0.19
LDLR-204ENST00000545707 LRRC36Q1X8D7 754 aa16.26■□□□□ 0.19
LDLR-204ENST00000545707 NET1Q7Z628 596 aaPredicted RBP16.26■□□□□ 0.19
LDLR-204ENST00000545707 CMC1Q7Z7K0 106 aa16.26■□□□□ 0.19
LDLR-204ENST00000545707 WDR75Q8IWA0 830 aaKnown RBP16.26■□□□□ 0.19
LDLR-204ENST00000545707 ZNF483Q8TF39 744 aaPredicted RBP16.26■□□□□ 0.19
LDLR-204ENST00000545707 AZIN2Q96A70 460 aa16.26■□□□□ 0.19
LDLR-204ENST00000545707 FAM149B1Q96BN6 582 aa16.26■□□□□ 0.19
LDLR-204ENST00000545707 SYBUQ9NX95 663 aa16.26■□□□□ 0.19
LDLR-204ENST00000545707 TMEM216Q9P0N5 145 aa16.26■□□□□ 0.19
LDLR-204ENST00000545707 A0A0A0MRY4 1105 aa16.26■□□□□ 0.19
LDLR-204ENST00000545707 LOC100653049A0A140TA62 436 aa16.26■□□□□ 0.19
LDLR-204ENST00000545707 RNF103O00237 685 aa16.26■□□□□ 0.19
LDLR-204ENST00000545707 SMIM24O75264 130 aa16.26■□□□□ 0.19
LDLR-204ENST00000545707 KRT34O76011 436 aa16.26■□□□□ 0.19
LDLR-204ENST00000545707 DESP17661 470 aa16.26■□□□□ 0.19
LDLR-204ENST00000545707 AKAP5P24588 427 aa16.26■□□□□ 0.19
LDLR-204ENST00000545707 NIPAL4Q0D2K0 466 aa16.26■□□□□ 0.19
LDLR-204ENST00000545707 PCLAFQ15004 111 aa16.26■□□□□ 0.19
LDLR-204ENST00000545707 OR52E8Q6IFG1 317 aa16.26■□□□□ 0.19
LDLR-204ENST00000545707 IZUMO2Q6UXV1 221 aa16.26■□□□□ 0.19
LDLR-204ENST00000545707 TIFABQ6ZNK6 161 aa16.26■□□□□ 0.19
LDLR-204ENST00000545707 ARCQ7LC44 396 aa16.26■□□□□ 0.19
LDLR-204ENST00000545707 MYLK4Q86YV6 388 aaPredicted RBP16.26■□□□□ 0.19
LDLR-204ENST00000545707 TNS4Q8IZW8 715 aa16.26■□□□□ 0.19
LDLR-204ENST00000545707 SPDYE1Q8NFV5 336 aaPredicted RBP16.26■□□□□ 0.19
LDLR-204ENST00000545707 PYDC1Q8WXC3 89 aa16.26■□□□□ 0.19
LDLR-204ENST00000545707 CENPIQ92674 756 aaPredicted RBP16.26■□□□□ 0.19
LDLR-204ENST00000545707 MOCOSQ96EN8 888 aa16.26■□□□□ 0.19
LDLR-204ENST00000545707 P2RY11Q96G91 374 aa16.26■□□□□ 0.19
LDLR-204ENST00000545707 SPATA13Q96N96 652 aa16.26■□□□□ 0.19
LDLR-204ENST00000545707 OXCT2Q9BYC2 517 aaPredicted RBP16.26■□□□□ 0.19
LDLR-204ENST00000545707 CDHR5Q9HBB8 845 aa16.26■□□□□ 0.19
LDLR-204ENST00000545707 CYP4F11Q9HBI6 524 aa16.26■□□□□ 0.19
LDLR-204ENST00000545707 ACSS2Q9NR19 701 aa16.26■□□□□ 0.19
LDLR-204ENST00000545707 PPP2R3BQ9Y5P8 575 aa16.26■□□□□ 0.19
LDLR-204ENST00000545707 A0A0G2JMZ2 1700 aa16.25■□□□□ 0.19
LDLR-204ENST00000545707 LRRC37A2A6NM11 1700 aa16.25■□□□□ 0.19
LDLR-204ENST00000545707 CREB3O43889 395 aa16.25■□□□□ 0.19
LDLR-204ENST00000545707 ZMPSTE24O75844 475 aa16.25■□□□□ 0.19
LDLR-204ENST00000545707 DGKIO75912 1065 aa16.25■□□□□ 0.19
LDLR-204ENST00000545707 PDE5AO76074 875 aa16.25■□□□□ 0.19
LDLR-204ENST00000545707 ITGA2BP08514 1039 aa16.25■□□□□ 0.19
LDLR-204ENST00000545707 ZCCHC18P0CG32 403 aa16.25■□□□□ 0.19
LDLR-204ENST00000545707 ADCYAP1R1P41586 468 aa16.25■□□□□ 0.19
LDLR-204ENST00000545707 PTPN9P43378 593 aa16.25■□□□□ 0.19
LDLR-204ENST00000545707 NR2C2P49116 596 aa16.25■□□□□ 0.19
LDLR-204ENST00000545707 RABGGTBP53611 331 aa16.25■□□□□ 0.19
LDLR-204ENST00000545707 EPHB1P54762 984 aa16.25■□□□□ 0.19
LDLR-204ENST00000545707 POU5F1BQ06416 359 aa16.25■□□□□ 0.19
LDLR-204ENST00000545707 LBRQ14739 615 aaKnown RBP16.25■□□□□ 0.19
LDLR-204ENST00000545707 KYAT3Q6YP21 454 aaKnown RBP16.25■□□□□ 0.19
LDLR-204ENST00000545707 IFNLR1Q8IU57 520 aaPredicted RBP16.25■□□□□ 0.19
LDLR-204ENST00000545707 HIPK4Q8NE63 616 aa16.25■□□□□ 0.19
LDLR-204ENST00000545707 SLC2A14Q8TDB8 520 aa16.25■□□□□ 0.19
LDLR-204ENST00000545707 AGAP3Q96P47 875 aa16.25■□□□□ 0.19
LDLR-204ENST00000545707 FAM49AQ9H0Q0 323 aaPredicted RBP16.25■□□□□ 0.19
LDLR-204ENST00000545707 KLK14Q9P0G3 267 aa16.25■□□□□ 0.19
LDLR-204ENST00000545707 USP3Q9Y6I4 520 aa16.25■□□□□ 0.19
LDLR-204ENST00000545707 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.25■□□□□ 0.19
LDLR-204ENST00000545707 F8W8V4 182 aa16.25■□□□□ 0.19
LDLR-204ENST00000545707 KCNK1O00180 336 aa16.25■□□□□ 0.19
LDLR-204ENST00000545707 ALDH1A2O94788 518 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms