RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 FBRSQ9HAH7 460 aa13.42□□□□□ -0.26
USP28-212ENST00000544750 APOBEC3GQ9HC16 384 aaKnown RBP13.42□□□□□ -0.26
USP28-212ENST00000544750 PRSS16Q9NQE7 514 aa13.42□□□□□ -0.26
USP28-212ENST00000544750 MARCH2Q9P0N8 246 aa13.42□□□□□ -0.26
USP28-212ENST00000544750 FTSJ1Q9UET6 329 aa13.42□□□□□ -0.26
USP28-212ENST00000544750 MAST4O15021 2626 aa13.41□□□□□ -0.26
USP28-212ENST00000544750 PVALEFA0A1B0GWK0 134 aa13.41□□□□□ -0.26
USP28-212ENST00000544750 ENC1O14682 589 aa13.41□□□□□ -0.26
USP28-212ENST00000544750 IKBKBO14920 756 aa13.41□□□□□ -0.26
USP28-212ENST00000544750 VILLO15195 856 aa13.41□□□□□ -0.26
USP28-212ENST00000544750 CLSTN1O94985 981 aa13.41□□□□□ -0.26
USP28-212ENST00000544750 FSBPO95073 299 aa13.41□□□□□ -0.26
USP28-212ENST00000544750 HLA-DRAP01903 254 aa13.41□□□□□ -0.26
USP28-212ENST00000544750 C1SP09871 688 aa13.41□□□□□ -0.26
USP28-212ENST00000544750 RACK1P63244 317 aaKnown RBP13.41□□□□□ -0.26
USP28-212ENST00000544750 TRIP4Q15650 581 aaPredicted RBP13.41□□□□□ -0.26
USP28-212ENST00000544750 CCDC157Q569K6 752 aa13.41□□□□□ -0.26
USP28-212ENST00000544750 RAB41Q5JT25 222 aa13.41□□□□□ -0.26
USP28-212ENST00000544750 ATL3Q6DD88 541 aa13.41□□□□□ -0.26
USP28-212ENST00000544750 PCSK4Q6UW60 755 aa13.41□□□□□ -0.26
USP28-212ENST00000544750 ENGASEQ8NFI3 743 aa13.41□□□□□ -0.26
USP28-212ENST00000544750 SNIP1Q8TAD8 396 aaKnown RBP13.41□□□□□ -0.26
USP28-212ENST00000544750 GOLGA5Q8TBA6 731 aa13.41□□□□□ -0.26
USP28-212ENST00000544750 WFIKKN2Q8TEU8 576 aa13.41□□□□□ -0.26
USP28-212ENST00000544750 CYB5D2Q8WUJ1 264 aa13.41□□□□□ -0.26
USP28-212ENST00000544750 PLD4Q96BZ4 506 aa13.41□□□□□ -0.26
USP28-212ENST00000544750 BLZF1Q9H2G9 400 aa13.41□□□□□ -0.26
USP28-212ENST00000544750 KCTD10Q9H3F6 313 aa13.41□□□□□ -0.26
USP28-212ENST00000544750 EBF2Q9HAK2 575 aa13.41□□□□□ -0.26
USP28-212ENST00000544750 MAGEF1Q9HAY2 307 aa13.41□□□□□ -0.26
USP28-212ENST00000544750 CYP3A43Q9HB55 503 aa13.41□□□□□ -0.26
USP28-212ENST00000544750 SGK2Q9HBY8 427 aa13.41□□□□□ -0.26
USP28-212ENST00000544750 STOML2Q9UJZ1 356 aa13.41□□□□□ -0.26
USP28-212ENST00000544750 A0A1W2PPC4 97 aa13.4□□□□□ -0.26
USP28-212ENST00000544750 SLC12A8A0AV02 714 aa13.4□□□□□ -0.26
USP28-212ENST00000544750 CBX4O00257 560 aa13.4□□□□□ -0.26
USP28-212ENST00000544750 KLRC4O43908 158 aa13.4□□□□□ -0.26
USP28-212ENST00000544750 CUTAO60888 179 aa13.4□□□□□ -0.26
USP28-212ENST00000544750 WNT1P04628 370 aa13.4□□□□□ -0.26
USP28-212ENST00000544750 CDK4P11802 303 aa13.4□□□□□ -0.26
USP28-212ENST00000544750 ACADVLP49748 655 aa13.4□□□□□ -0.26
USP28-212ENST00000544750 BCAT1P54687 386 aa13.4□□□□□ -0.26
USP28-212ENST00000544750 DNAJC3Q13217 504 aa13.4□□□□□ -0.26
USP28-212ENST00000544750 CUL4BQ13620 913 aa13.4□□□□□ -0.26
USP28-212ENST00000544750 INAVAQ3KP66 663 aa13.4□□□□□ -0.26
USP28-212ENST00000544750 MPPE1Q53F39 396 aa13.4□□□□□ -0.26
USP28-212ENST00000544750 C6orf118Q5T5N4 469 aa13.4□□□□□ -0.26
USP28-212ENST00000544750 FBXL19Q6PCT2 694 aa13.4□□□□□ -0.26
USP28-212ENST00000544750 CHST9Q7L1S5 443 aa13.4□□□□□ -0.26
USP28-212ENST00000544750 BHLHA9Q7RTU4 235 aa13.4□□□□□ -0.26
USP28-212ENST00000544750 GATAD2AQ86YP4 633 aa13.4□□□□□ -0.26
USP28-212ENST00000544750 ZNF843Q8N446 348 aa13.4□□□□□ -0.26
USP28-212ENST00000544750 KIAA0895Q8NCT3 520 aa13.4□□□□□ -0.26
USP28-212ENST00000544750 SAP25Q8TEE9 199 aa13.4□□□□□ -0.26
USP28-212ENST00000544750 TSC1Q92574 1164 aa13.4□□□□□ -0.26
USP28-212ENST00000544750 MYO19Q96H55 970 aa13.4□□□□□ -0.26
USP28-212ENST00000544750 ELF4Q99607 663 aaPredicted RBP13.4□□□□□ -0.26
USP28-212ENST00000544750 UBXN6Q9BZV1 441 aa13.4□□□□□ -0.26
USP28-212ENST00000544750 NRSN2Q9GZP1 204 aa13.4□□□□□ -0.26
USP28-212ENST00000544750 PCDHA7Q9UN72 937 aa13.4□□□□□ -0.26
USP28-212ENST00000544750 MYO18BQ8IUG5 2567 aa13.39□□□□□ -0.27
USP28-212ENST00000544750 RFPL3O75679 317 aa13.39□□□□□ -0.27
USP28-212ENST00000544750 DNTTP04053 509 aa13.39□□□□□ -0.27
USP28-212ENST00000544750 JUPP14923 745 aa13.39□□□□□ -0.27
USP28-212ENST00000544750 TRIM21P19474 475 aaKnown RBP13.39□□□□□ -0.27
USP28-212ENST00000544750 HNF1BP35680 557 aa13.39□□□□□ -0.27
USP28-212ENST00000544750 ARID5AQ03989 594 aa13.39□□□□□ -0.27
USP28-212ENST00000544750 STK4Q13043 487 aa13.39□□□□□ -0.27
USP28-212ENST00000544750 BECN1Q14457 450 aa13.39□□□□□ -0.27
USP28-212ENST00000544750 FNDC3BQ53EP0 1204 aaKnown RBP13.39□□□□□ -0.27
USP28-212ENST00000544750 PRAMEF14Q5SWL7 426 aa13.39□□□□□ -0.27
USP28-212ENST00000544750 KIAA0895LQ68EN5 471 aa13.39□□□□□ -0.27
USP28-212ENST00000544750 PM20D1Q6GTS8 502 aa13.39□□□□□ -0.27
USP28-212ENST00000544750 USP30Q70CQ3 517 aa13.39□□□□□ -0.27
USP28-212ENST00000544750 WFDC5Q8TCV5 224 aa13.39□□□□□ -0.27
USP28-212ENST00000544750 CNDP2Q96KP4 475 aaKnown RBP13.39□□□□□ -0.27
USP28-212ENST00000544750 SLC6A18Q96N87 628 aa13.39□□□□□ -0.27
USP28-212ENST00000544750 FCRL3Q96P31 734 aaPredicted RBP13.39□□□□□ -0.27
USP28-212ENST00000544750 ARID3AQ99856 593 aa13.39□□□□□ -0.27
USP28-212ENST00000544750 RSPH9Q9H1X1 276 aaPredicted RBP13.39□□□□□ -0.27
USP28-212ENST00000544750 RCOR1Q9UKL0 485 aa13.39□□□□□ -0.27
USP28-212ENST00000544750 PLA2G4CQ9UP65 541 aa13.39□□□□□ -0.27
USP28-212ENST00000544750 TDRD6O60522 2096 aaKnown RBP13.39□□□□□ -0.27
USP28-212ENST00000544750 NAV2Q8IVL1 2488 aa13.39□□□□□ -0.27
USP28-212ENST00000544750 A0A1W2PR77 199 aa13.38□□□□□ -0.27
USP28-212ENST00000544750 PDXKO00764 312 aa13.38□□□□□ -0.27
USP28-212ENST00000544750 POLR2DO15514 142 aaKnown RBP13.38□□□□□ -0.27
USP28-212ENST00000544750 LDOC1O95751 146 aaPredicted RBP13.38□□□□□ -0.27
USP28-212ENST00000544750 DLDP09622 509 aaKnown RBP13.38□□□□□ -0.27
USP28-212ENST00000544750 PABPC1P11940 636 aaKnown RBP13.38□□□□□ -0.27
USP28-212ENST00000544750 PIK3CAP42336 1068 aa13.38□□□□□ -0.27
USP28-212ENST00000544750 SGSHP51688 502 aa13.38□□□□□ -0.27
USP28-212ENST00000544750 ZNF445P59923 1031 aa13.38□□□□□ -0.27
USP28-212ENST00000544750 YWHAGP61981 247 aaKnown RBP eCLIP13.38□□□□□ -0.27
USP28-212ENST00000544750 SEMG2Q02383 582 aa13.38□□□□□ -0.27
USP28-212ENST00000544750 TARDBPQ13148 414 aaKnown RBP eCLIP13.38□□□□□ -0.27
USP28-212ENST00000544750 KCNJ12Q14500 433 aa13.38□□□□□ -0.27
USP28-212ENST00000544750 TTC31Q49AM3 519 aaPredicted RBP13.38□□□□□ -0.27
USP28-212ENST00000544750 HES3Q5TGS1 186 aa13.38□□□□□ -0.27
USP28-212ENST00000544750 MBLAC2Q68D91 279 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms