RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 BAIAP3O94812 1187 aa19.82■□□□□ 0.76
SUDS3-204ENST00000543473 JCHAINP01591 159 aa19.82■□□□□ 0.76
SUDS3-204ENST00000543473 ITGAVP06756 1048 aa19.82■□□□□ 0.76
SUDS3-204ENST00000543473 TSHRP16473 764 aa19.82■□□□□ 0.76
SUDS3-204ENST00000543473 PRKAA2P54646 552 aa19.82■□□□□ 0.76
SUDS3-204ENST00000543473 ACAP1Q15027 740 aa19.82■□□□□ 0.76
SUDS3-204ENST00000543473 SLC1A5Q15758 541 aa19.82■□□□□ 0.76
SUDS3-204ENST00000543473 LIN52Q52LA3 116 aa19.82■□□□□ 0.76
SUDS3-204ENST00000543473 EFCAB3Q8N7B9 438 aa19.82■□□□□ 0.76
SUDS3-204ENST00000543473 HTR3CQ8WXA8 447 aa19.82■□□□□ 0.76
SUDS3-204ENST00000543473 LRRC4CQ9HCJ2 640 aa19.82■□□□□ 0.76
SUDS3-204ENST00000543473 NR2E1Q9Y466 385 aa19.82■□□□□ 0.76
SUDS3-204ENST00000543473 SLURP2P0DP57 97 aa19.82■□□□□ 0.76
SUDS3-204ENST00000543473 COX4I1P13073 169 aa19.82■□□□□ 0.76
SUDS3-204ENST00000543473 FGFR3P22607 806 aa19.82■□□□□ 0.76
SUDS3-204ENST00000543473 RAD23AP54725 363 aa19.82■□□□□ 0.76
SUDS3-204ENST00000543473 TTC27Q6P3X3 843 aa19.82■□□□□ 0.76
SUDS3-204ENST00000543473 ARCQ7LC44 396 aa19.82■□□□□ 0.76
SUDS3-204ENST00000543473 MAGED4Q96JG8 741 aa19.82■□□□□ 0.76
SUDS3-204ENST00000543473 CPNE1Q99829 537 aa19.82■□□□□ 0.76
SUDS3-204ENST00000543473 BDH2Q9BUT1 245 aa19.82■□□□□ 0.76
SUDS3-204ENST00000543473 USP20Q9Y2K6 914 aa19.82■□□□□ 0.76
SUDS3-204ENST00000543473 CFAP99D6REC4 459 aa19.82■□□□□ 0.76
SUDS3-204ENST00000543473 ZNF197O14709 1029 aa19.82■□□□□ 0.76
SUDS3-204ENST00000543473 PIGNO95427 931 aa19.82■□□□□ 0.76
SUDS3-204ENST00000543473 NPTXRO95502 500 aa19.82■□□□□ 0.76
SUDS3-204ENST00000543473 LDLRP01130 860 aa19.82■□□□□ 0.76
SUDS3-204ENST00000543473 VIL1P09327 827 aaKnown RBP19.82■□□□□ 0.76
SUDS3-204ENST00000543473 UQCRBP14927 111 aa19.82■□□□□ 0.76
SUDS3-204ENST00000543473 EVX2Q03828 476 aa19.82■□□□□ 0.76
SUDS3-204ENST00000543473 BMT2Q1RMZ1 405 aa19.82■□□□□ 0.76
SUDS3-204ENST00000543473 FKBP1CQ5VVH2 108 aa19.82■□□□□ 0.76
SUDS3-204ENST00000543473 PCDH20Q8N6Y1 951 aaKnown RBP19.82■□□□□ 0.76
SUDS3-204ENST00000543473 NMUR2Q9GZQ4 415 aa19.82■□□□□ 0.76
SUDS3-204ENST00000543473 SLC12A4Q9UP95 1085 aa19.82■□□□□ 0.76
SUDS3-204ENST00000543473 PEAK1Q9H792 1746 aa19.82■□□□□ 0.76
SUDS3-204ENST00000543473 TCRBV7S2A1N4TA0A589 114 aa19.82■□□□□ 0.76
SUDS3-204ENST00000543473 CHADO15335 359 aa19.82■□□□□ 0.76
SUDS3-204ENST00000543473 GAS2O43903 313 aaKnown RBP19.82■□□□□ 0.76
SUDS3-204ENST00000543473 AMHR2Q16671 573 aa19.82■□□□□ 0.76
SUDS3-204ENST00000543473 TMC7Q7Z402 723 aa19.82■□□□□ 0.76
SUDS3-204ENST00000543473 ARHGEF3Q9NR81 526 aa19.82■□□□□ 0.76
SUDS3-204ENST00000543473 TMEM161AQ9NX61 479 aa19.82■□□□□ 0.76
SUDS3-204ENST00000543473 SLC30A1Q9Y6M5 507 aa19.82■□□□□ 0.76
SUDS3-204ENST00000543473 ATRNO75882 1429 aa19.82■□□□□ 0.76
SUDS3-204ENST00000543473 PRR5-ARHGAP8B1AHC4 643 aa19.81■□□□□ 0.76
SUDS3-204ENST00000543473 PRPF4O43172 522 aaKnown RBP eCLIP19.81■□□□□ 0.76
SUDS3-204ENST00000543473 LYNP07948 512 aa19.81■□□□□ 0.76
SUDS3-204ENST00000543473 SUPT20HL2P0C7V6 817 aa19.81■□□□□ 0.76
SUDS3-204ENST00000543473 TTKP33981 857 aa19.81■□□□□ 0.76
SUDS3-204ENST00000543473 ARHGAP8P85298 464 aa19.81■□□□□ 0.76
SUDS3-204ENST00000543473 C9orf16Q9BUW7 83 aa19.81■□□□□ 0.76
SUDS3-204ENST00000543473 GPBP1L1Q9HC44 474 aaPredicted RBP19.81■□□□□ 0.76
SUDS3-204ENST00000543473 RABGEF1Q9UJ41 708 aa19.81■□□□□ 0.76
SUDS3-204ENST00000543473 EME2A4GXA9 379 aaPredicted RBP19.81■□□□□ 0.76
SUDS3-204ENST00000543473 CHRM3P20309 590 aa19.81■□□□□ 0.76
SUDS3-204ENST00000543473 RRM2BQ7LG56 351 aa19.81■□□□□ 0.76
SUDS3-204ENST00000543473 PHF21BQ96EK2 531 aa19.81■□□□□ 0.76
SUDS3-204ENST00000543473 CCDC28BQ9BUN5 200 aa19.81■□□□□ 0.76
SUDS3-204ENST00000543473 PIF1Q9H611 641 aa19.81■□□□□ 0.76
SUDS3-204ENST00000543473 WDCPQ9H6R7 721 aa19.81■□□□□ 0.76
SUDS3-204ENST00000543473 CYP3A43Q9HB55 503 aa19.81■□□□□ 0.76
SUDS3-204ENST00000543473 UBP1Q9NZI7 540 aa19.81■□□□□ 0.76
SUDS3-204ENST00000543473 NRXN3Q9Y4C0 1643 aa19.81■□□□□ 0.76
SUDS3-204ENST00000543473 TPP1O14773 563 aa19.81■□□□□ 0.76
SUDS3-204ENST00000543473 ADRB2P07550 413 aa19.81■□□□□ 0.76
SUDS3-204ENST00000543473 GALNTL6Q49A17 601 aa19.81■□□□□ 0.76
SUDS3-204ENST00000543473 ATP6AP1LQ52LC2 224 aa19.81■□□□□ 0.76
SUDS3-204ENST00000543473 TMC5Q6UXY8 1006 aa19.81■□□□□ 0.76
SUDS3-204ENST00000543473 GPC2Q8N158 579 aa19.81■□□□□ 0.76
SUDS3-204ENST00000543473 OSCP1Q8WVF1 389 aa19.81■□□□□ 0.76
SUDS3-204ENST00000543473 EZH1Q92800 747 aaPredicted RBP19.81■□□□□ 0.76
SUDS3-204ENST00000543473 KCTD14Q9BQ13 255 aaPredicted RBP19.81■□□□□ 0.76
SUDS3-204ENST00000543473 MRIQ9BWK5 157 aa19.81■□□□□ 0.76
SUDS3-204ENST00000543473 FZD1Q9UP38 647 aa19.81■□□□□ 0.76
SUDS3-204ENST00000543473 KIF13AQ9H1H9 1805 aa19.81■□□□□ 0.76
SUDS3-204ENST00000543473 MAGEB16A2A368 324 aa19.81■□□□□ 0.76
SUDS3-204ENST00000543473 CSDE1O75534 798 aaKnown RBP19.81■□□□□ 0.76
SUDS3-204ENST00000543473 MAPK11Q15759 364 aa19.81■□□□□ 0.76
SUDS3-204ENST00000543473 KHDC1Q4VXA5 237 aaKnown RBP19.81■□□□□ 0.76
SUDS3-204ENST00000543473 ARSHQ5FYA8 562 aa19.81■□□□□ 0.76
SUDS3-204ENST00000543473 MAP1SQ66K74 1059 aaPredicted RBP19.81■□□□□ 0.76
SUDS3-204ENST00000543473 KCNT2Q6UVM3 1135 aa19.81■□□□□ 0.76
SUDS3-204ENST00000543473 SEMA4DQ92854 862 aa19.81■□□□□ 0.76
SUDS3-204ENST00000543473 PLGRKTQ9HBL7 147 aa19.81■□□□□ 0.76
SUDS3-204ENST00000543473 PXMP2Q9NR77 195 aa19.81■□□□□ 0.76
SUDS3-204ENST00000543473 C6orf203Q9P0P8 240 aaPredicted RBP19.81■□□□□ 0.76
SUDS3-204ENST00000543473 AP4B1Q9Y6B7 739 aa19.81■□□□□ 0.76
SUDS3-204ENST00000543473 UMODL1Q5DID0 1318 aa19.8■□□□□ 0.76
SUDS3-204ENST00000543473 RPL14P50914 215 aaKnown RBP19.8■□□□□ 0.76
SUDS3-204ENST00000543473 XIAPP98170 497 aa19.8■□□□□ 0.76
SUDS3-204ENST00000543473 EFHBQ8N7U6 833 aa19.8■□□□□ 0.76
SUDS3-204ENST00000543473 ETNK2Q9NVF9 386 aa19.8■□□□□ 0.76
SUDS3-204ENST00000543473 GALNT8Q9NY28 637 aa19.8■□□□□ 0.76
SUDS3-204ENST00000543473 CYP2C9P11712 490 aa19.8■□□□□ 0.76
SUDS3-204ENST00000543473 GRIK1P39086 918 aa19.8■□□□□ 0.76
SUDS3-204ENST00000543473 TAS2R40P59535 323 aa19.8■□□□□ 0.76
SUDS3-204ENST00000543473 WASHC5Q12768 1159 aa19.8■□□□□ 0.76
SUDS3-204ENST00000543473 CSTF3Q12996 717 aaKnown RBP19.8■□□□□ 0.76
SUDS3-204ENST00000543473 ITGADQ13349 1161 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms