RNA–Protein interactions for RNA: ENST00000542714.5

CHFR-221, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-221ENST00000542714 MSRAQ9UJ68 235 aa13.72□□□□□ -0.21
CHFR-221ENST00000542714 DNMT3LQ9UJW3 386 aa13.72□□□□□ -0.21
CHFR-221ENST00000542714 DRG1Q9Y295 367 aaKnown RBP13.72□□□□□ -0.21
CHFR-221ENST00000542714 HBS1LQ9Y450 684 aaKnown RBP13.72□□□□□ -0.21
CHFR-221ENST00000542714 HS3ST4Q9Y661 456 aa13.72□□□□□ -0.21
CHFR-221ENST00000542714 CEP290O15078 2479 aa13.72□□□□□ -0.21
CHFR-221ENST00000542714 NYNRINQ9P2P1 1898 aaKnown RBP13.72□□□□□ -0.21
CHFR-221ENST00000542714 C2orf16Q68DN1 1984 aa13.71□□□□□ -0.21
CHFR-221ENST00000542714 MFSD11O43934 449 aa13.71□□□□□ -0.21
CHFR-221ENST00000542714 RFPL2O75678 378 aa13.71□□□□□ -0.21
CHFR-221ENST00000542714 LRIG2O94898 1065 aa13.71□□□□□ -0.21
CHFR-221ENST00000542714 MOCS2O96007 188 aaPredicted RBP13.71□□□□□ -0.21
CHFR-221ENST00000542714 ITGAVP06756 1048 aa13.71□□□□□ -0.21
CHFR-221ENST00000542714 HMBSP08397 361 aa13.71□□□□□ -0.21
CHFR-221ENST00000542714 SLC2A3P11169 496 aa13.71□□□□□ -0.21
CHFR-221ENST00000542714 HOXC13P31276 330 aa13.71□□□□□ -0.21
CHFR-221ENST00000542714 ATP5C1P36542 298 aaKnown RBP13.71□□□□□ -0.21
CHFR-221ENST00000542714 PPP3CCP48454 512 aa13.71□□□□□ -0.21
CHFR-221ENST00000542714 KCNQ1P51787 676 aa13.71□□□□□ -0.21
CHFR-221ENST00000542714 EIF3EP60228 445 aaKnown RBP13.71□□□□□ -0.21
CHFR-221ENST00000542714 NRG1Q02297 640 aaPredicted RBP13.71□□□□□ -0.21
CHFR-221ENST00000542714 GBE1Q04446 702 aa13.71□□□□□ -0.21
CHFR-221ENST00000542714 RING1Q06587 406 aa13.71□□□□□ -0.21
CHFR-221ENST00000542714 PTK6Q13882 451 aa13.71□□□□□ -0.21
CHFR-221ENST00000542714 PAFAH1B3Q15102 231 aaKnown RBP13.71□□□□□ -0.21
CHFR-221ENST00000542714 PPM1LQ5SGD2 360 aa13.71□□□□□ -0.21
CHFR-221ENST00000542714 PPP2R2DQ66LE6 453 aa13.71□□□□□ -0.21
CHFR-221ENST00000542714 CCNI2Q6ZMN8 369 aaPredicted RBP13.71□□□□□ -0.21
CHFR-221ENST00000542714 GAREM2Q75VX8 874 aa13.71□□□□□ -0.21
CHFR-221ENST00000542714 DDX42Q86XP3 938 aaKnown RBP eCLIP13.71□□□□□ -0.21
CHFR-221ENST00000542714 ZNF683Q8IZ20 524 aa13.71□□□□□ -0.21
CHFR-221ENST00000542714 ALLCQ8N6M5 410 aa13.71□□□□□ -0.21
CHFR-221ENST00000542714 GLIS1Q8NBF1 620 aa13.71□□□□□ -0.21
CHFR-221ENST00000542714 ARNTL2Q8WYA1 636 aa13.71□□□□□ -0.21
CHFR-221ENST00000542714 WBP2Q969T9 261 aa13.71□□□□□ -0.21
CHFR-221ENST00000542714 CCDC114Q96M63 670 aa13.71□□□□□ -0.21
CHFR-221ENST00000542714 EPAS1Q99814 870 aa13.71□□□□□ -0.21
CHFR-221ENST00000542714 ERP44Q9BS26 406 aa13.71□□□□□ -0.21
CHFR-221ENST00000542714 RNF38Q9H0F5 515 aa13.71□□□□□ -0.21
CHFR-221ENST00000542714 SIK2Q9H0K1 926 aa13.71□□□□□ -0.21
CHFR-221ENST00000542714 LMAN2LQ9H0V9 348 aa13.71□□□□□ -0.21
CHFR-221ENST00000542714 PRDM16Q9HAZ2 1276 aa13.71□□□□□ -0.21
CHFR-221ENST00000542714 OR12D3Q9UGF7 316 aa13.71□□□□□ -0.21
CHFR-221ENST00000542714 NUP205Q92621 2012 aa13.71□□□□□ -0.22
CHFR-221ENST00000542714 SHROOM3Q8TF72 1996 aa13.71□□□□□ -0.22
CHFR-221ENST00000542714 PER2O15055 1255 aa13.7□□□□□ -0.22
CHFR-221ENST00000542714 MCF2LO15068 1137 aa13.7□□□□□ -0.22
CHFR-221ENST00000542714 DAPK3O43293 454 aa13.7□□□□□ -0.22
CHFR-221ENST00000542714 MAP3K6O95382 1288 aa13.7□□□□□ -0.22
CHFR-221ENST00000542714 OLFM2O95897 454 aa13.7□□□□□ -0.22
CHFR-221ENST00000542714 APOEP02649 317 aa13.7□□□□□ -0.22
CHFR-221ENST00000542714 ZFXP17010 805 aaPredicted RBP13.7□□□□□ -0.22
CHFR-221ENST00000542714 ERCC2P18074 760 aa13.7□□□□□ -0.22
CHFR-221ENST00000542714 GABRR2P28476 465 aa13.7□□□□□ -0.22
CHFR-221ENST00000542714 ECHS1P30084 290 aa13.7□□□□□ -0.22
CHFR-221ENST00000542714 CARSP49589 748 aaKnown RBP13.7□□□□□ -0.22
CHFR-221ENST00000542714 CLCN6P51797 869 aa13.7□□□□□ -0.22
CHFR-221ENST00000542714 ZNF135P52742 658 aaPredicted RBP13.7□□□□□ -0.22
CHFR-221ENST00000542714 CYP4F8P98187 520 aa13.7□□□□□ -0.22
CHFR-221ENST00000542714 BRD3Q15059 726 aa13.7□□□□□ -0.22
CHFR-221ENST00000542714 MS4A13Q5J8X5 152 aa13.7□□□□□ -0.22
CHFR-221ENST00000542714 NADSYN1Q6IA69 706 aa13.7□□□□□ -0.22
CHFR-221ENST00000542714 SYDE1Q6ZW31 735 aaPredicted RBP13.7□□□□□ -0.22
CHFR-221ENST00000542714 B4GALNT4Q76KP1 1039 aa13.7□□□□□ -0.22
CHFR-221ENST00000542714 RTL10Q7L3V2 364 aa13.7□□□□□ -0.22
CHFR-221ENST00000542714 TADA2BQ86TJ2 420 aa13.7□□□□□ -0.22
CHFR-221ENST00000542714 PRUNE1Q86TP1 453 aa13.7□□□□□ -0.22
CHFR-221ENST00000542714 IFT20Q8IY31 132 aa13.7□□□□□ -0.22
CHFR-221ENST00000542714 GRK7Q8WTQ7 553 aa13.7□□□□□ -0.22
CHFR-221ENST00000542714 P3H4Q92791 437 aa13.7□□□□□ -0.22
CHFR-221ENST00000542714 ZFRQ96KR1 1074 aaKnown RBP13.7□□□□□ -0.22
CHFR-221ENST00000542714 OLFM3Q96PB7 478 aa13.7□□□□□ -0.22
CHFR-221ENST00000542714 SLC22A12Q96S37 553 aa13.7□□□□□ -0.22
CHFR-221ENST00000542714 PRMT1Q99873 361 aaKnown RBP13.7□□□□□ -0.22
CHFR-221ENST00000542714 KLF16Q9BXK1 252 aaPredicted RBP13.7□□□□□ -0.22
CHFR-221ENST00000542714 NEUROG2Q9H2A3 272 aa13.7□□□□□ -0.22
CHFR-221ENST00000542714 DPH5Q9H2P9 285 aa13.7□□□□□ -0.22
CHFR-221ENST00000542714 HCFC1R1Q9NWW0 138 aa13.7□□□□□ -0.22
CHFR-221ENST00000542714 GRHL1Q9NZI5 618 aa13.7□□□□□ -0.22
CHFR-221ENST00000542714 DTLQ9NZJ0 730 aa13.7□□□□□ -0.22
CHFR-221ENST00000542714 ZNF148Q9UQR1 794 aa13.7□□□□□ -0.22
CHFR-221ENST00000542714 HEY1Q9Y5J3 304 aa13.7□□□□□ -0.22
CHFR-221ENST00000542714 E9PAM4 449 aa13.69□□□□□ -0.22
CHFR-221ENST00000542714 TUBBP07437 444 aa13.69□□□□□ -0.22
CHFR-221ENST00000542714 RBP3P10745 1247 aa13.69□□□□□ -0.22
CHFR-221ENST00000542714 ETS1P14921 441 aa13.69□□□□□ -0.22
CHFR-221ENST00000542714 IVDP26440 423 aa13.69□□□□□ -0.22
CHFR-221ENST00000542714 HOXA9P31269 272 aa13.69□□□□□ -0.22
CHFR-221ENST00000542714 CCR2P41597 374 aa13.69□□□□□ -0.22
CHFR-221ENST00000542714 RPL21P46778 160 aaKnown RBP13.69□□□□□ -0.22
CHFR-221ENST00000542714 NR2C2P49116 596 aa13.69□□□□□ -0.22
CHFR-221ENST00000542714 IRAK1P51617 712 aa13.69□□□□□ -0.22
CHFR-221ENST00000542714 KPNA1P52294 538 aaPredicted RBP13.69□□□□□ -0.22
CHFR-221ENST00000542714 EPHA5P54756 1037 aa13.69□□□□□ -0.22
CHFR-221ENST00000542714 GDF10P55107 478 aa13.69□□□□□ -0.22
CHFR-221ENST00000542714 MLLT6P55198 1093 aaPredicted RBP13.69□□□□□ -0.22
CHFR-221ENST00000542714 RBM10P98175 930 aaKnown RBP13.69□□□□□ -0.22
CHFR-221ENST00000542714 TRIP13Q15645 432 aaPredicted RBP13.69□□□□□ -0.22
CHFR-221ENST00000542714 ZC3H18Q86VM9 953 aaKnown RBP13.69□□□□□ -0.22
CHFR-221ENST00000542714 UNC45BQ8IWX7 931 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms