RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.04■□□□□ 0.16
ECHDC2-223ENST00000542552 SPAG17Q6Q759 2223 aa16.04■□□□□ 0.16
ECHDC2-223ENST00000542552 LAMA1P25391 3075 aa16.03■□□□□ 0.16
ECHDC2-223ENST00000542552 SPTBN4Q9H254 2564 aa16.03■□□□□ 0.16
ECHDC2-223ENST00000542552 A0A1W2PQC6 194 aa16.03■□□□□ 0.16
ECHDC2-223ENST00000542552 A0A1W2PQF6 199 aa16.03■□□□□ 0.16
ECHDC2-223ENST00000542552 RPP40O75818 363 aaKnown RBP16.03■□□□□ 0.16
ECHDC2-223ENST00000542552 APOEP02649 317 aa16.03■□□□□ 0.16
ECHDC2-223ENST00000542552 MMP8P22894 467 aa16.03■□□□□ 0.16
ECHDC2-223ENST00000542552 HLA-FP30511 346 aa16.03■□□□□ 0.16
ECHDC2-223ENST00000542552 ENPP2Q13822 863 aa16.03■□□□□ 0.16
ECHDC2-223ENST00000542552 NR1I3Q14994 352 aa16.03■□□□□ 0.16
ECHDC2-223ENST00000542552 FILIP1LQ4L180 1135 aa16.03■□□□□ 0.16
ECHDC2-223ENST00000542552 MS4A13Q5J8X5 152 aa16.03■□□□□ 0.16
ECHDC2-223ENST00000542552 TMEM215Q68D42 235 aa16.03■□□□□ 0.16
ECHDC2-223ENST00000542552 TRIM72Q6ZMU5 477 aa16.03■□□□□ 0.16
ECHDC2-223ENST00000542552 ANKS1BQ7Z6G8 1248 aa16.03■□□□□ 0.16
ECHDC2-223ENST00000542552 MDGA1Q8NFP4 955 aa16.03■□□□□ 0.16
ECHDC2-223ENST00000542552 OLIG1Q8TAK6 271 aa16.03■□□□□ 0.16
ECHDC2-223ENST00000542552 BAP1Q92560 729 aa16.03■□□□□ 0.16
ECHDC2-223ENST00000542552 LMLNQ96KR4 655 aa16.03■□□□□ 0.16
ECHDC2-223ENST00000542552 PRICKLE1Q96MT3 831 aaPredicted RBP16.03■□□□□ 0.16
ECHDC2-223ENST00000542552 PCDHB18PQ96TA0 734 aa16.03■□□□□ 0.16
ECHDC2-223ENST00000542552 NPY6RQ99463 290 aa16.03■□□□□ 0.16
ECHDC2-223ENST00000542552 NUCKS1Q9H1E3 243 aaKnown RBP16.03■□□□□ 0.16
ECHDC2-223ENST00000542552 FAM204AQ9H8W3 233 aa16.03■□□□□ 0.16
ECHDC2-223ENST00000542552 DDIT4Q9NX09 232 aa16.03■□□□□ 0.16
ECHDC2-223ENST00000542552 ELOVL2Q9NXB9 296 aa16.03■□□□□ 0.16
ECHDC2-223ENST00000542552 RRN3Q9NYV6 651 aa16.03■□□□□ 0.16
ECHDC2-223ENST00000542552 CALCOCO1Q9P1Z2 691 aa16.03■□□□□ 0.16
ECHDC2-223ENST00000542552 XPO7Q9UIA9 1087 aaKnown RBP16.03■□□□□ 0.16
ECHDC2-223ENST00000542552 TMEM59LQ9UK28 342 aa16.03■□□□□ 0.16
ECHDC2-223ENST00000542552 MYO6Q9UM54 1294 aa16.03■□□□□ 0.16
ECHDC2-223ENST00000542552 NPC1O15118 1278 aa16.02■□□□□ 0.16
ECHDC2-223ENST00000542552 TIMM44O43615 452 aa16.02■□□□□ 0.16
ECHDC2-223ENST00000542552 TBL1XO60907 577 aa16.02■□□□□ 0.16
ECHDC2-223ENST00000542552 SLC2A3P11169 496 aa16.02■□□□□ 0.16
ECHDC2-223ENST00000542552 UNGP13051 313 aaPredicted RBP16.02■□□□□ 0.16
ECHDC2-223ENST00000542552 CCR1P32246 355 aa16.02■□□□□ 0.16
ECHDC2-223ENST00000542552 GBP1P32455 592 aa16.02■□□□□ 0.16
ECHDC2-223ENST00000542552 EIF4HQ15056 248 aaKnown RBP16.02■□□□□ 0.16
ECHDC2-223ENST00000542552 C2CD6Q53TS8 623 aa16.02■□□□□ 0.16
ECHDC2-223ENST00000542552 LAIR1Q6GTX8 287 aa16.02■□□□□ 0.16
ECHDC2-223ENST00000542552 ANO7Q6IWH7 933 aa16.02■□□□□ 0.16
ECHDC2-223ENST00000542552 ARCQ7LC44 396 aa16.02■□□□□ 0.16
ECHDC2-223ENST00000542552 IRF2BP2Q7Z5L9 587 aa16.02■□□□□ 0.16
ECHDC2-223ENST00000542552 LUZP1Q86V48 1076 aa16.02■□□□□ 0.16
ECHDC2-223ENST00000542552 CHPFQ8IZ52 775 aa16.02■□□□□ 0.16
ECHDC2-223ENST00000542552 HJURPQ8NCD3 748 aaPredicted RBP16.02■□□□□ 0.16
ECHDC2-223ENST00000542552 MSANTD4Q8NCY6 345 aa16.02■□□□□ 0.16
ECHDC2-223ENST00000542552 PGAP3Q96FM1 320 aaPredicted RBP16.02■□□□□ 0.16
ECHDC2-223ENST00000542552 ZC3H10Q96K80 434 aaKnown RBP16.02■□□□□ 0.16
ECHDC2-223ENST00000542552 PRMT1Q99873 361 aaKnown RBP16.02■□□□□ 0.16
ECHDC2-223ENST00000542552 POLMQ9NP87 494 aaPredicted RBP16.02■□□□□ 0.16
ECHDC2-223ENST00000542552 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.02■□□□□ 0.16
ECHDC2-223ENST00000542552 THAP10Q9P2Z0 257 aaPredicted RBP16.02■□□□□ 0.16
ECHDC2-223ENST00000542552 PLXND1Q9Y4D7 1925 aa16.02■□□□□ 0.15
ECHDC2-223ENST00000542552 DCHS1Q96JQ0 3298 aa16.01■□□□□ 0.15
ECHDC2-223ENST00000542552 ALDH1A2O94788 518 aa16.01■□□□□ 0.15
ECHDC2-223ENST00000542552 MOCS2O96007 188 aaPredicted RBP16.01■□□□□ 0.15
ECHDC2-223ENST00000542552 HOXB2P14652 356 aa16.01■□□□□ 0.15
ECHDC2-223ENST00000542552 TACR2P21452 398 aa16.01■□□□□ 0.15
ECHDC2-223ENST00000542552 RPS24P62847 133 aaKnown RBP16.01■□□□□ 0.15
ECHDC2-223ENST00000542552 CENPCQ03188 943 aa16.01■□□□□ 0.15
ECHDC2-223ENST00000542552 PTP4A2Q12974 167 aa16.01■□□□□ 0.15
ECHDC2-223ENST00000542552 FAM102AQ5T9C2 384 aaPredicted RBP16.01■□□□□ 0.15
ECHDC2-223ENST00000542552 TRNP1Q6NT89 227 aa16.01■□□□□ 0.15
ECHDC2-223ENST00000542552 PRR23BQ6ZRT6 265 aa16.01■□□□□ 0.15
ECHDC2-223ENST00000542552 CACNA2D4Q7Z3S7 1137 aa16.01■□□□□ 0.15
ECHDC2-223ENST00000542552 BNIPLQ7Z465 357 aa16.01■□□□□ 0.15
ECHDC2-223ENST00000542552 ADIPOR2Q86V24 386 aa16.01■□□□□ 0.15
ECHDC2-223ENST00000542552 DCLK2Q8N568 766 aa16.01■□□□□ 0.15
ECHDC2-223ENST00000542552 FAM160A2Q8N612 972 aaPredicted RBP16.01■□□□□ 0.15
ECHDC2-223ENST00000542552 ATP6V0D2Q8N8Y2 350 aa16.01■□□□□ 0.15
ECHDC2-223ENST00000542552 FIBINQ8TAL6 211 aa16.01■□□□□ 0.15
ECHDC2-223ENST00000542552 WFDC5Q8TCV5 224 aa16.01■□□□□ 0.15
ECHDC2-223ENST00000542552 WFIKKN2Q8TEU8 576 aa16.01■□□□□ 0.15
ECHDC2-223ENST00000542552 CACNA2D2Q9NY47 1150 aa16.01■□□□□ 0.15
ECHDC2-223ENST00000542552 RAB23Q9ULC3 237 aa16.01■□□□□ 0.15
ECHDC2-223ENST00000542552 MUC22E2RYF6 1773 aaPredicted RBP16■□□□□ 0.15
ECHDC2-223ENST00000542552 DNAH14Q0VDD8 3507 aa16■□□□□ 0.15
ECHDC2-223ENST00000542552 TCRBV21S2A2A0A5A6 115 aa16■□□□□ 0.15
ECHDC2-223ENST00000542552 FAM170AA1A519 330 aa16■□□□□ 0.15
ECHDC2-223ENST00000542552 WASH3PC4AMC7 463 aa16■□□□□ 0.15
ECHDC2-223ENST00000542552 M0QYT0 321 aa16■□□□□ 0.15
ECHDC2-223ENST00000542552 RETP07949 1114 aa16■□□□□ 0.15
ECHDC2-223ENST00000542552 FERP16591 822 aa16■□□□□ 0.15
ECHDC2-223ENST00000542552 TFE3P19532 575 aaPredicted RBP16■□□□□ 0.15
ECHDC2-223ENST00000542552 TGM1P22735 817 aa16■□□□□ 0.15
ECHDC2-223ENST00000542552 FLT3P36888 993 aa16■□□□□ 0.15
ECHDC2-223ENST00000542552 WASP42768 502 aa16■□□□□ 0.15
ECHDC2-223ENST00000542552 CXCR3P49682 368 aa16■□□□□ 0.15
ECHDC2-223ENST00000542552 RNASE9P60153 205 aaKnown RBP16■□□□□ 0.15
ECHDC2-223ENST00000542552 ARID5AQ03989 594 aa16■□□□□ 0.15
ECHDC2-223ENST00000542552 MTA1Q13330 715 aa16■□□□□ 0.15
ECHDC2-223ENST00000542552 E2F5Q15329 346 aa16■□□□□ 0.15
ECHDC2-223ENST00000542552 LPAL2Q16609 132 aa16■□□□□ 0.15
ECHDC2-223ENST00000542552 CLEC16AQ2KHT3 1053 aa16■□□□□ 0.15
ECHDC2-223ENST00000542552 SLC25A52Q3SY17 297 aa16■□□□□ 0.15
ECHDC2-223ENST00000542552 RAP1GAP2Q684P5 730 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms