RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 DTLQ9NZJ0 730 aa11.39□□□□□ -0.59
SCG3-202ENST00000542355 TPX2Q9ULW0 747 aaKnown RBP11.39□□□□□ -0.59
SCG3-202ENST00000542355 DNALI1O14645 258 aaPredicted RBP11.38□□□□□ -0.59
SCG3-202ENST00000542355 PEX14O75381 377 aa11.38□□□□□ -0.59
SCG3-202ENST00000542355 ABLIM3O94929 683 aa11.38□□□□□ -0.59
SCG3-202ENST00000542355 ERCC2P18074 760 aa11.38□□□□□ -0.59
SCG3-202ENST00000542355 CHKAP35790 457 aa11.38□□□□□ -0.59
SCG3-202ENST00000542355 PMS2P54278 862 aa11.38□□□□□ -0.59
SCG3-202ENST00000542355 TPI1P60174 286 aa11.38□□□□□ -0.59
SCG3-202ENST00000542355 CAV1Q03135 178 aa11.38□□□□□ -0.59
SCG3-202ENST00000542355 SEMA3BQ13214 749 aa11.38□□□□□ -0.59
SCG3-202ENST00000542355 DPYSQ14117 519 aa11.38□□□□□ -0.59
SCG3-202ENST00000542355 HSP90B2PQ58FF3 399 aa11.38□□□□□ -0.59
SCG3-202ENST00000542355 TMEM240Q5SV17 173 aa11.38□□□□□ -0.59
SCG3-202ENST00000542355 EGFLAMQ63HQ2 1017 aa11.38□□□□□ -0.59
SCG3-202ENST00000542355 HIBCHQ6NVY1 386 aaPredicted RBP11.38□□□□□ -0.59
SCG3-202ENST00000542355 SERPINB11Q96P15 392 aa11.38□□□□□ -0.59
SCG3-202ENST00000542355 ALG2Q9H553 416 aa11.38□□□□□ -0.59
SCG3-202ENST00000542355 MRPL17Q9NRX2 175 aaKnown RBP11.38□□□□□ -0.59
SCG3-202ENST00000542355 DNAJC17Q9NVM6 304 aaKnown RBP11.38□□□□□ -0.59
SCG3-202ENST00000542355 ARHGEF38Q9NXL2 777 aa11.38□□□□□ -0.59
SCG3-202ENST00000542355 TMA7Q9Y2S6 64 aaKnown RBP11.38□□□□□ -0.59
SCG3-202ENST00000542355 INSL6Q9Y581 213 aa11.38□□□□□ -0.59
SCG3-202ENST00000542355 TLDC2A0PJX2 215 aa11.38□□□□□ -0.59
SCG3-202ENST00000542355 BCLAF3A2AJT9 711 aaKnown RBP11.38□□□□□ -0.59
SCG3-202ENST00000542355 RRP9O43818 475 aaKnown RBP11.38□□□□□ -0.59
SCG3-202ENST00000542355 FGF18O76093 207 aa11.38□□□□□ -0.59
SCG3-202ENST00000542355 SYF2O95926 243 aaKnown RBP11.38□□□□□ -0.59
SCG3-202ENST00000542355 SRGAP2BP0DMP2 458 aa11.38□□□□□ -0.59
SCG3-202ENST00000542355 EPHB2P29323 1055 aa11.38□□□□□ -0.59
SCG3-202ENST00000542355 CA8P35219 290 aa11.38□□□□□ -0.59
SCG3-202ENST00000542355 PPM1AP35813 382 aa11.38□□□□□ -0.59
SCG3-202ENST00000542355 HTRA4P83105 476 aaPredicted RBP11.38□□□□□ -0.59
SCG3-202ENST00000542355 EFEMP1Q12805 493 aa11.38□□□□□ -0.59
SCG3-202ENST00000542355 DSG2Q14126 1118 aa11.38□□□□□ -0.59
SCG3-202ENST00000542355 SLMAPQ14BN4 828 aa11.38□□□□□ -0.59
SCG3-202ENST00000542355 BRMS1LQ5PSV4 323 aa11.38□□□□□ -0.59
SCG3-202ENST00000542355 RUFY1Q96T51 708 aa11.38□□□□□ -0.59
SCG3-202ENST00000542355 EPAS1Q99814 870 aa11.38□□□□□ -0.59
SCG3-202ENST00000542355 SEMA4AQ9H3S1 761 aa11.38□□□□□ -0.59
SCG3-202ENST00000542355 PRDM10Q9NQV6 1147 aa11.38□□□□□ -0.59
SCG3-202ENST00000542355 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.38□□□□□ -0.59
SCG3-202ENST00000542355 COMMD8Q9NX08 183 aa11.38□□□□□ -0.59
SCG3-202ENST00000542355 CLIC5Q9NZA1 410 aa11.38□□□□□ -0.59
SCG3-202ENST00000542355 ZMIZ1Q9ULJ6 1067 aa11.38□□□□□ -0.59
SCG3-202ENST00000542355 PLAAQ9Y263 795 aa11.38□□□□□ -0.59
SCG3-202ENST00000542355 LAMA2P24043 3122 aaKnown RBP11.37□□□□□ -0.59
SCG3-202ENST00000542355 MFSD11O43934 449 aa11.37□□□□□ -0.59
SCG3-202ENST00000542355 GPR37L1O60883 481 aa11.37□□□□□ -0.59
SCG3-202ENST00000542355 PAGE1O75459 146 aa11.37□□□□□ -0.59
SCG3-202ENST00000542355 LRIG2O94898 1065 aa11.37□□□□□ -0.59
SCG3-202ENST00000542355 MOCS2O96007 188 aaPredicted RBP11.37□□□□□ -0.59
SCG3-202ENST00000542355 OAS2P29728 719 aaKnown RBP11.37□□□□□ -0.59
SCG3-202ENST00000542355 ACTN2P35609 894 aa11.37□□□□□ -0.59
SCG3-202ENST00000542355 HCAR3P49019 387 aa11.37□□□□□ -0.59
SCG3-202ENST00000542355 XRCC4Q13426 336 aa11.37□□□□□ -0.59
SCG3-202ENST00000542355 PPP2R5DQ14738 602 aa11.37□□□□□ -0.59
SCG3-202ENST00000542355 TPGS2Q68CL5 300 aa11.37□□□□□ -0.59
SCG3-202ENST00000542355 BZW1Q7L1Q6 419 aaKnown RBP11.37□□□□□ -0.59
SCG3-202ENST00000542355 MIB1Q86YT6 1006 aa11.37□□□□□ -0.59
SCG3-202ENST00000542355 OR2W6PQ8NHA6 318 aa11.37□□□□□ -0.59
SCG3-202ENST00000542355 HAPLN3Q96S86 360 aa11.37□□□□□ -0.59
SCG3-202ENST00000542355 LGMNQ99538 433 aa11.37□□□□□ -0.59
SCG3-202ENST00000542355 OSBPL2Q9H1P3 480 aa11.37□□□□□ -0.59
SCG3-202ENST00000542355 XPO7Q9UIA9 1087 aaKnown RBP11.37□□□□□ -0.59
SCG3-202ENST00000542355 TLR6Q9Y2C9 796 aa11.37□□□□□ -0.59
SCG3-202ENST00000542355 NR2E3Q9Y5X4 410 aa11.37□□□□□ -0.59
SCG3-202ENST00000542355 LTBP2Q14767 1821 aa11.37□□□□□ -0.59
SCG3-202ENST00000542355 PTPRDP23468 1912 aa11.37□□□□□ -0.59
SCG3-202ENST00000542355 DCLK1O15075 740 aa11.37□□□□□ -0.59
SCG3-202ENST00000542355 ALDH1A3P47895 512 aa11.37□□□□□ -0.59
SCG3-202ENST00000542355 SERPINB4P48594 390 aa11.37□□□□□ -0.59
SCG3-202ENST00000542355 TBX4P57082 545 aa11.37□□□□□ -0.59
SCG3-202ENST00000542355 RAB33AQ14088 237 aa11.37□□□□□ -0.59
SCG3-202ENST00000542355 PAFAH1B3Q15102 231 aaKnown RBP11.37□□□□□ -0.59
SCG3-202ENST00000542355 SLC45A4Q5BKX6 768 aa11.37□□□□□ -0.59
SCG3-202ENST00000542355 C10orf120Q5SQS8 335 aa11.37□□□□□ -0.59
SCG3-202ENST00000542355 RNASEH2BQ5TBB1 312 aaKnown RBP11.37□□□□□ -0.59
SCG3-202ENST00000542355 RWDD4Q6NW29 188 aaKnown RBP11.37□□□□□ -0.59
SCG3-202ENST00000542355 MSANTD2Q6P1R3 559 aa11.37□□□□□ -0.59
SCG3-202ENST00000542355 PSRC1Q6PGN9 363 aaPredicted RBP11.37□□□□□ -0.59
SCG3-202ENST00000542355 CDKL3Q8IVW4 592 aaPredicted RBP11.37□□□□□ -0.59
SCG3-202ENST00000542355 TP53INP2Q8IXH6 220 aa11.37□□□□□ -0.59
SCG3-202ENST00000542355 TFB1MQ8WVM0 346 aaKnown RBP11.37□□□□□ -0.59
SCG3-202ENST00000542355 FCRL2Q96LA5 508 aaPredicted RBP11.37□□□□□ -0.59
SCG3-202ENST00000542355 ZNF512Q96ME7 567 aaPredicted RBP11.37□□□□□ -0.59
SCG3-202ENST00000542355 TSPYL1Q9H0U9 437 aa11.37□□□□□ -0.59
SCG3-202ENST00000542355 PABPC3Q9H361 631 aaKnown RBP11.37□□□□□ -0.59
SCG3-202ENST00000542355 SLC4A7Q9Y6M7 1214 aa11.37□□□□□ -0.59
SCG3-202ENST00000542355 CFAP69A5D8W1 941 aa11.36□□□□□ -0.59
SCG3-202ENST00000542355 KCNU1A8MYU2 1149 aa11.36□□□□□ -0.59
SCG3-202ENST00000542355 POLR3GO15318 223 aaPredicted RBP11.36□□□□□ -0.59
SCG3-202ENST00000542355 TEX28O15482 410 aa11.36□□□□□ -0.59
SCG3-202ENST00000542355 ZDHHC11BP0C7U3 371 aa11.36□□□□□ -0.59
SCG3-202ENST00000542355 LINC00271P0C7V0 271 aa11.36□□□□□ -0.59
SCG3-202ENST00000542355 ELF1P32519 619 aa11.36□□□□□ -0.59
SCG3-202ENST00000542355 BASP1P80723 227 aaKnown RBP11.36□□□□□ -0.59
SCG3-202ENST00000542355 VAC14Q08AM6 782 aa11.36□□□□□ -0.59
SCG3-202ENST00000542355 MORF4L2Q15014 288 aa11.36□□□□□ -0.59
SCG3-202ENST00000542355 PCGF5Q86SE9 256 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms