RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 ADCY5O95622 1261 aa10.1□□□□□ -0.79
YBX3-212ENST00000542002 LATS1O95835 1130 aa10.1□□□□□ -0.79
YBX3-212ENST00000542002 MOCS2O96007 188 aaPredicted RBP10.1□□□□□ -0.79
YBX3-212ENST00000542002 SKILP12757 684 aa10.1□□□□□ -0.79
YBX3-212ENST00000542002 FERP16591 822 aa10.1□□□□□ -0.79
YBX3-212ENST00000542002 HLA-FP30511 346 aa10.1□□□□□ -0.79
YBX3-212ENST00000542002 HOXA6P31267 233 aa10.1□□□□□ -0.79
YBX3-212ENST00000542002 SLC11A2P49281 568 aa10.1□□□□□ -0.79
YBX3-212ENST00000542002 MRE11P49959 708 aa10.1□□□□□ -0.79
YBX3-212ENST00000542002 RPS24P62847 133 aaKnown RBP10.1□□□□□ -0.79
YBX3-212ENST00000542002 MRPS21P82921 87 aaKnown RBP10.1□□□□□ -0.79
YBX3-212ENST00000542002 CENPCQ03188 943 aa10.1□□□□□ -0.79
YBX3-212ENST00000542002 NME3Q13232 169 aa10.1□□□□□ -0.79
YBX3-212ENST00000542002 MPPE1Q53F39 396 aa10.1□□□□□ -0.79
YBX3-212ENST00000542002 FSCBQ5H9T9 825 aa10.1□□□□□ -0.79
YBX3-212ENST00000542002 MS4A13Q5J8X5 152 aa10.1□□□□□ -0.79
YBX3-212ENST00000542002 FAM102AQ5T9C2 384 aaPredicted RBP10.1□□□□□ -0.79
YBX3-212ENST00000542002 SH3PXD2AQ5TCZ1 1133 aa10.1□□□□□ -0.79
YBX3-212ENST00000542002 C14orf80Q86SX3 495 aa10.1□□□□□ -0.79
YBX3-212ENST00000542002 PHF13Q86YI8 300 aaPredicted RBP10.1□□□□□ -0.79
YBX3-212ENST00000542002 SUMF1Q8NBK3 374 aa10.1□□□□□ -0.79
YBX3-212ENST00000542002 JOSD2Q8TAC2 188 aa10.1□□□□□ -0.79
YBX3-212ENST00000542002 IPO4Q8TEX9 1081 aaKnown RBP10.1□□□□□ -0.79
YBX3-212ENST00000542002 SORCS1Q8WY21 1168 aa10.1□□□□□ -0.79
YBX3-212ENST00000542002 EXOC4Q96A65 974 aa10.1□□□□□ -0.79
YBX3-212ENST00000542002 ERLEC1Q96DZ1 483 aa10.1□□□□□ -0.79
YBX3-212ENST00000542002 TBCBQ99426 244 aa10.1□□□□□ -0.79
YBX3-212ENST00000542002 C11orf70Q9BRQ4 267 aa10.1□□□□□ -0.79
YBX3-212ENST00000542002 TRIM62Q9BVG3 475 aa10.1□□□□□ -0.79
YBX3-212ENST00000542002 MAGEB5Q9BZ81 275 aa10.1□□□□□ -0.79
YBX3-212ENST00000542002 XPO4Q9C0E2 1151 aaKnown RBP10.1□□□□□ -0.79
YBX3-212ENST00000542002 HAUS4Q9H6D7 363 aa10.1□□□□□ -0.79
YBX3-212ENST00000542002 FAM204AQ9H8W3 233 aa10.1□□□□□ -0.79
YBX3-212ENST00000542002 CD248Q9HCU0 757 aa10.1□□□□□ -0.79
YBX3-212ENST00000542002 PLSCR2Q9NRY7 297 aa10.1□□□□□ -0.79
YBX3-212ENST00000542002 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.1□□□□□ -0.79
YBX3-212ENST00000542002 MYO6Q9UM54 1294 aa10.1□□□□□ -0.79
YBX3-212ENST00000542002 SLC8A2Q9UPR5 921 aa10.1□□□□□ -0.79
YBX3-212ENST00000542002 SLC27A6Q9Y2P4 619 aa10.1□□□□□ -0.79
YBX3-212ENST00000542002 PCDHGA2Q9Y5H1 932 aa10.1□□□□□ -0.79
YBX3-212ENST00000542002 SNX10Q9Y5X0 201 aa10.1□□□□□ -0.79
YBX3-212ENST00000542002 MIA3Q5JRA6 1907 aa10.09□□□□□ -0.79
YBX3-212ENST00000542002 FRYLO94915 3013 aa10.09□□□□□ -0.79
YBX3-212ENST00000542002 A0A1W2PQF6 199 aa10.09□□□□□ -0.79
YBX3-212ENST00000542002 TBL1XO60907 577 aa10.09□□□□□ -0.79
YBX3-212ENST00000542002 TACR2P21452 398 aa10.09□□□□□ -0.79
YBX3-212ENST00000542002 CD70P32970 193 aa10.09□□□□□ -0.79
YBX3-212ENST00000542002 SCNN1AP37088 669 aa10.09□□□□□ -0.79
YBX3-212ENST00000542002 WASP42768 502 aa10.09□□□□□ -0.79
YBX3-212ENST00000542002 CXCR3P49682 368 aa10.09□□□□□ -0.79
YBX3-212ENST00000542002 IRAK1P51617 712 aa10.09□□□□□ -0.79
YBX3-212ENST00000542002 SNX16P57768 344 aa10.09□□□□□ -0.79
YBX3-212ENST00000542002 CRY1Q16526 586 aa10.09□□□□□ -0.79
YBX3-212ENST00000542002 SLC25A52Q3SY17 297 aa10.09□□□□□ -0.79
YBX3-212ENST00000542002 CCDC14Q49A88 953 aa10.09□□□□□ -0.79
YBX3-212ENST00000542002 FIGNQ5HY92 759 aa10.09□□□□□ -0.79
YBX3-212ENST00000542002 SFMBT2Q5VUG0 894 aa10.09□□□□□ -0.79
YBX3-212ENST00000542002 RAP1GAP2Q684P5 730 aa10.09□□□□□ -0.79
YBX3-212ENST00000542002 HGSNATQ68CP4 663 aa10.09□□□□□ -0.79
YBX3-212ENST00000542002 ACAD10Q6JQN1 1059 aa10.09□□□□□ -0.79
YBX3-212ENST00000542002 TRIM72Q6ZMU5 477 aa10.09□□□□□ -0.79
YBX3-212ENST00000542002 MON1BQ7L1V2 547 aa10.09□□□□□ -0.79
YBX3-212ENST00000542002 KIAA0907Q7Z7F0 614 aaPredicted RBP10.09□□□□□ -0.79
YBX3-212ENST00000542002 ADIPOR2Q86V24 386 aa10.09□□□□□ -0.79
YBX3-212ENST00000542002 FRMD1Q8N878 549 aa10.09□□□□□ -0.79
YBX3-212ENST00000542002 ZNF513Q8N8E2 541 aaPredicted RBP10.09□□□□□ -0.79
YBX3-212ENST00000542002 CPLX3Q8WVH0 158 aa10.09□□□□□ -0.79
YBX3-212ENST00000542002 ATRIPQ8WXE1 791 aa10.09□□□□□ -0.79
YBX3-212ENST00000542002 IGSF8Q969P0 613 aa10.09□□□□□ -0.79
YBX3-212ENST00000542002 PGAP3Q96FM1 320 aaPredicted RBP10.09□□□□□ -0.79
YBX3-212ENST00000542002 BTN2A3PQ96KV6 586 aa10.09□□□□□ -0.79
YBX3-212ENST00000542002 CFAP57Q96MR6 1250 aa10.09□□□□□ -0.79
YBX3-212ENST00000542002 EDEM3Q9BZQ6 932 aa10.09□□□□□ -0.79
YBX3-212ENST00000542002 SEPT11Q9NVA2 429 aaKnown RBP10.09□□□□□ -0.79
YBX3-212ENST00000542002 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.09□□□□□ -0.79
YBX3-212ENST00000542002 ADAM22Q9P0K1 906 aa10.09□□□□□ -0.79
YBX3-212ENST00000542002 STIM2Q9P246 746 aa10.09□□□□□ -0.79
YBX3-212ENST00000542002 MMP17Q9ULZ9 603 aa10.09□□□□□ -0.79
YBX3-212ENST00000542002 HS3ST4Q9Y661 456 aa10.09□□□□□ -0.79
YBX3-212ENST00000542002 CACNA1HO95180 2353 aa10.09□□□□□ -0.79
YBX3-212ENST00000542002 PRR23AA6NEV1 266 aa10.08□□□□□ -0.8
YBX3-212ENST00000542002 C2CD4BA6NLJ0 364 aa10.08□□□□□ -0.8
YBX3-212ENST00000542002 TMCO5BA8MYB1 307 aa10.08□□□□□ -0.8
YBX3-212ENST00000542002 DDX3XO00571 662 aaKnown RBP eCLIP10.08□□□□□ -0.8
YBX3-212ENST00000542002 PAGE1O75459 146 aa10.08□□□□□ -0.8
YBX3-212ENST00000542002 ENDOD1O94919 500 aa10.08□□□□□ -0.8
YBX3-212ENST00000542002 CYBBP04839 570 aa10.08□□□□□ -0.8
YBX3-212ENST00000542002 GYPCP04921 128 aa10.08□□□□□ -0.8
YBX3-212ENST00000542002 PLEKP08567 350 aaPredicted RBP10.08□□□□□ -0.8
YBX3-212ENST00000542002 TNFAIP3P21580 790 aa10.08□□□□□ -0.8
YBX3-212ENST00000542002 CCR1P32246 355 aa10.08□□□□□ -0.8
YBX3-212ENST00000542002 GBP1P32455 592 aa10.08□□□□□ -0.8
YBX3-212ENST00000542002 RFC1P35251 1148 aaPredicted RBP10.08□□□□□ -0.8
YBX3-212ENST00000542002 GGCXP38435 758 aa10.08□□□□□ -0.8
YBX3-212ENST00000542002 PRKCIP41743 596 aa10.08□□□□□ -0.8
YBX3-212ENST00000542002 NSFP46459 744 aaKnown RBP10.08□□□□□ -0.8
YBX3-212ENST00000542002 SULT1E1P49888 294 aa10.08□□□□□ -0.8
YBX3-212ENST00000542002 NRLP54845 237 aa10.08□□□□□ -0.8
YBX3-212ENST00000542002 ZNF445P59923 1031 aa10.08□□□□□ -0.8
YBX3-212ENST00000542002 TPM4P67936 248 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms