RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 TRIOO75962 3097 aa8.04□□□□□ -1.12
AC005840.3-201ENST00000541888 COL6A3P12111 3177 aa8.04□□□□□ -1.12
AC005840.3-201ENST00000541888 A0A1W2PQH9 124 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 C3orf70A6NLC5 250 aaPredicted RBP8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 HIDE1A8MVS5 230 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 MIF4GDA9UHW6 222 aaKnown RBP8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 SHISA8B8ZZ34 492 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 CAPN9O14815 690 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 TTI1O43156 1089 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 RAD51CO43502 376 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 TBC1D4O60343 1298 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 RNF8O76064 485 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 BAIAP3O94812 1187 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 SEC31AO94979 1220 aaKnown RBP8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 TRUB2O95900 331 aaKnown RBP8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 EFEMP2O95967 443 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 LTFP02788 710 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 CA3P07451 260 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 FAM157BP0CG42 384 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 CD33P20138 364 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 CTNNA2P26232 953 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 CTNNB1P35222 781 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 MAGEA10P43363 369 aaPredicted RBP8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 RPL34P49207 117 aaKnown RBP8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 GLUD2P49448 558 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 GSCP56915 257 aaPredicted RBP8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 CORO7P57737 925 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 ERVFC1P60507 584 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 SIX1Q15475 284 aaPredicted RBP8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 TRIP13Q15645 432 aaPredicted RBP8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 PLPP4Q5VZY2 271 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 BSPRYQ5W0U4 402 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 LRRC69Q6ZNQ3 347 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 C4orf50Q6ZRC1 276 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 SLC26A9Q7LBE3 791 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 CCDC91Q7Z6B0 441 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 RNF168Q8IYW5 571 aaPredicted RBP8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 RASGEF1CQ8N431 466 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 FIBCD1Q8N539 461 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 PRELID2Q8N945 189 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 STK32AQ8WU08 396 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 PBKQ96KB5 322 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 SLITRK1Q96PX8 696 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 TMEM175Q9BSA9 504 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 CNPY3Q9BT09 278 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 SNRNP25Q9BV90 132 aaKnown RBP8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 CARD9Q9H257 536 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 FAM124BQ9H5Z6 455 aaPredicted RBP8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 SPG21Q9NZD8 308 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 GMIPQ9P107 970 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 PCDHB5Q9Y5E4 795 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 DNMT3AQ9Y6K1 912 aaPredicted RBP8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 VCANP13611 3396 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 ANAPC1Q9H1A4 1944 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 OBSL1O75147 1896 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 FAM72CH0Y354 149 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 CLGNO14967 610 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 TEX28O15482 410 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 SOD2P04179 222 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 GLI1P08151 1106 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 HMBSP08397 361 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 MATKP42679 507 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 ACADSBP45954 432 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 VPS41P49754 854 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 CDH6P55285 790 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 VSNL1P62760 191 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 CKAP4Q07065 602 aaKnown RBP8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 FAM72AQ5TYM5 149 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 FAM72DQ6L9T8 149 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 ANKS3Q6ZW76 656 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 HDXQ7Z353 690 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 SCD5Q86SK9 330 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 TAC4Q86UU9 113 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 FAM72BQ86X60 149 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 SLC13A5Q86YT5 568 aaPredicted RBP8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 CMTR2Q8IYT2 770 aaKnown RBP8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 DCP1BQ8IZD4 617 aaKnown RBP8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 BEND7Q8N7W2 519 aaPredicted RBP8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 NIPA2Q8N8Q9 360 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 KCTD6Q8NC69 237 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 FAM71BQ8TC56 605 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 ACTRT1Q8TDG2 376 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 EDARADDQ8WWZ3 215 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 KCTD13Q8WZ19 329 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 HSFY1Q96LI6 401 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 LBHD1Q9BQE6 289 aaPredicted RBP8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 PARD6BQ9BYG5 372 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 DHX35Q9H5Z1 703 aaKnown RBP8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 CYP4F11Q9HBI6 524 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 POPDC2Q9HBU9 364 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 ASNSD1Q9NWL6 643 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 DDIT4Q9NX09 232 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 MTRRQ9UBK8 725 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 XPO7Q9UIA9 1087 aaKnown RBP8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 RAB21Q9UL25 225 aa8.03□□□□□ -1.12
AC005840.3-201ENST00000541888 LINC01553A4QN01 128 aa8.02□□□□□ -1.13
AC005840.3-201ENST00000541888 EFSO43281 561 aa8.02□□□□□ -1.13
AC005840.3-201ENST00000541888 SART1O43290 800 aaKnown RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms