RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 ADAM2Q99965 735 aa17.73■□□□□ 0.43
SPIDR-227ENST00000541342 TEX264Q9Y6I9 313 aa17.73■□□□□ 0.43
SPIDR-227ENST00000541342 A0A0U1RQF3 1178 aa17.72■□□□□ 0.43
SPIDR-227ENST00000541342 KBTBD13C9JR72 458 aa17.72■□□□□ 0.43
SPIDR-227ENST00000541342 AVILO75366 819 aa17.72■□□□□ 0.43
SPIDR-227ENST00000541342 TGDSO95455 350 aa17.72■□□□□ 0.43
SPIDR-227ENST00000541342 PYGBP11216 843 aa17.72■□□□□ 0.43
SPIDR-227ENST00000541342 LCP1P13796 627 aa17.72■□□□□ 0.43
SPIDR-227ENST00000541342 TFE3P19532 575 aaPredicted RBP17.72■□□□□ 0.43
SPIDR-227ENST00000541342 PEX19P40855 299 aa17.72■□□□□ 0.43
SPIDR-227ENST00000541342 BASP1P80723 227 aaKnown RBP17.72■□□□□ 0.43
SPIDR-227ENST00000541342 RCN1Q15293 331 aa17.72■□□□□ 0.43
SPIDR-227ENST00000541342 PRPF39Q86UA1 669 aaKnown RBP17.72■□□□□ 0.43
SPIDR-227ENST00000541342 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.72■□□□□ 0.43
SPIDR-227ENST00000541342 KCTD6Q8NC69 237 aa17.72■□□□□ 0.43
SPIDR-227ENST00000541342 PXYLP1Q8TE99 480 aa17.72■□□□□ 0.43
SPIDR-227ENST00000541342 NSL1Q96IY1 281 aa17.72■□□□□ 0.43
SPIDR-227ENST00000541342 TRPV6Q9H1D0 765 aa17.72■□□□□ 0.43
SPIDR-227ENST00000541342 TIMM13Q9Y5L4 95 aaPredicted RBP17.72■□□□□ 0.43
SPIDR-227ENST00000541342 FAM155BO75949 473 aa17.72■□□□□ 0.43
SPIDR-227ENST00000541342 CABYRO75952 493 aa17.72■□□□□ 0.43
SPIDR-227ENST00000541342 BEST1O76090 585 aa17.72■□□□□ 0.43
SPIDR-227ENST00000541342 MT-ND3P03897 115 aa17.72■□□□□ 0.43
SPIDR-227ENST00000541342 PTPN1P18031 435 aaKnown RBP17.72■□□□□ 0.43
SPIDR-227ENST00000541342 UPP1Q16831 310 aa17.72■□□□□ 0.43
SPIDR-227ENST00000541342 CYTH2Q99418 400 aa17.72■□□□□ 0.43
SPIDR-227ENST00000541342 HNRNPABQ99729 332 aaKnown RBP17.72■□□□□ 0.43
SPIDR-227ENST00000541342 FRMD8P1Q9BZ68 369 aaPredicted RBP17.72■□□□□ 0.43
SPIDR-227ENST00000541342 PLAC1Q9HBJ0 212 aa17.72■□□□□ 0.43
SPIDR-227ENST00000541342 TSC2P49815 1807 aa17.72■□□□□ 0.43
SPIDR-227ENST00000541342 APOC4-APOC2K7ER74 178 aa17.72■□□□□ 0.43
SPIDR-227ENST00000541342 APOC2P02655 101 aa17.72■□□□□ 0.43
SPIDR-227ENST00000541342 INHAP05111 366 aa17.72■□□□□ 0.43
SPIDR-227ENST00000541342 NPNTQ6UXI9 565 aa17.72■□□□□ 0.43
SPIDR-227ENST00000541342 ZDHHC17Q8IUH5 632 aa17.72■□□□□ 0.43
SPIDR-227ENST00000541342 TTC13Q8NBP0 860 aa17.72■□□□□ 0.43
SPIDR-227ENST00000541342 TTC17Q96AE7 1141 aa17.72■□□□□ 0.43
SPIDR-227ENST00000541342 YIPF3Q9GZM5 350 aa17.72■□□□□ 0.43
SPIDR-227ENST00000541342 EME2A4GXA9 379 aaPredicted RBP17.71■□□□□ 0.43
SPIDR-227ENST00000541342 POMCP01189 267 aa17.71■□□□□ 0.43
SPIDR-227ENST00000541342 EIF3EP60228 445 aaKnown RBP17.71■□□□□ 0.43
SPIDR-227ENST00000541342 KCNJ11Q14654 390 aa17.71■□□□□ 0.43
SPIDR-227ENST00000541342 TRAF7Q6Q0C0 670 aa17.71■□□□□ 0.43
SPIDR-227ENST00000541342 FAM172AQ8WUF8 416 aa17.71■□□□□ 0.43
SPIDR-227ENST00000541342 UCMAQ8WVF2 138 aa17.71■□□□□ 0.43
SPIDR-227ENST00000541342 RSAD1Q9HA92 442 aa17.71■□□□□ 0.43
SPIDR-227ENST00000541342 CRTAC1Q9NQ79 661 aa17.71■□□□□ 0.43
SPIDR-227ENST00000541342 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.71■□□□□ 0.43
SPIDR-227ENST00000541342 DDX43Q9NXZ2 648 aaKnown RBP17.71■□□□□ 0.43
SPIDR-227ENST00000541342 ARMCX1Q9P291 453 aa17.71■□□□□ 0.43
SPIDR-227ENST00000541342 FAM237BA0A1B0GVD1 139 aa17.71■□□□□ 0.43
SPIDR-227ENST00000541342 TBX10O75333 385 aa17.71■□□□□ 0.43
SPIDR-227ENST00000541342 LMNAP02545 664 aaKnown RBP17.71■□□□□ 0.43
SPIDR-227ENST00000541342 MMRN1Q13201 1228 aa17.71■□□□□ 0.43
SPIDR-227ENST00000541342 ALYREFQ86V81 257 aaKnown RBP17.71■□□□□ 0.43
SPIDR-227ENST00000541342 FBXO27Q8NI29 283 aa17.71■□□□□ 0.43
SPIDR-227ENST00000541342 NMUR2Q9GZQ4 415 aa17.71■□□□□ 0.43
SPIDR-227ENST00000541342 MTO1Q9Y2Z2 717 aaKnown RBP17.71■□□□□ 0.43
SPIDR-227ENST00000541342 NVLO15381 856 aaKnown RBP17.7■□□□□ 0.42
SPIDR-227ENST00000541342 GYG2O15488 501 aa17.7■□□□□ 0.42
SPIDR-227ENST00000541342 ENDOD1O94919 500 aa17.7■□□□□ 0.42
SPIDR-227ENST00000541342 RBP3P10745 1247 aa17.7■□□□□ 0.42
SPIDR-227ENST00000541342 CKBP12277 381 aa17.7■□□□□ 0.42
SPIDR-227ENST00000541342 RAB27AP51159 221 aa17.7■□□□□ 0.42
SPIDR-227ENST00000541342 MBTPS1Q14703 1052 aa17.7■□□□□ 0.42
SPIDR-227ENST00000541342 MDH1BQ5I0G3 518 aa17.7■□□□□ 0.42
SPIDR-227ENST00000541342 SNX30Q5VWJ9 437 aa17.7■□□□□ 0.42
SPIDR-227ENST00000541342 ARMC2Q8NEN0 867 aa17.7■□□□□ 0.42
SPIDR-227ENST00000541342 DUSP16Q9BY84 665 aa17.7■□□□□ 0.42
SPIDR-227ENST00000541342 MYL2P10916 166 aa17.7■□□□□ 0.42
SPIDR-227ENST00000541342 TSHRP16473 764 aa17.7■□□□□ 0.42
SPIDR-227ENST00000541342 SDC4P31431 198 aa17.7■□□□□ 0.42
SPIDR-227ENST00000541342 APLP1P51693 650 aa17.7■□□□□ 0.42
SPIDR-227ENST00000541342 KRT72Q14CN4 511 aa17.7■□□□□ 0.42
SPIDR-227ENST00000541342 SLC26A9Q7LBE3 791 aa17.7■□□□□ 0.42
SPIDR-227ENST00000541342 PIGZQ86VD9 579 aa17.7■□□□□ 0.42
SPIDR-227ENST00000541342 SPATA18Q8TC71 538 aa17.7■□□□□ 0.42
SPIDR-227ENST00000541342 NDRG1Q92597 394 aaKnown RBP17.7■□□□□ 0.42
SPIDR-227ENST00000541342 GLT1D1Q96MS3 346 aa17.7■□□□□ 0.42
SPIDR-227ENST00000541342 C11orf84Q9BUA3 381 aaPredicted RBP17.7■□□□□ 0.42
SPIDR-227ENST00000541342 NGRNQ9NPE2 291 aaKnown RBP17.7■□□□□ 0.42
SPIDR-227ENST00000541342 MOXD2PA6NHM9 499 aa17.7■□□□□ 0.42
SPIDR-227ENST00000541342 PPP1R12AO14974 1030 aaPredicted RBP17.7■□□□□ 0.42
SPIDR-227ENST00000541342 XPO1O14980 1071 aaKnown RBP17.7■□□□□ 0.42
SPIDR-227ENST00000541342 IL1BP01584 269 aa17.7■□□□□ 0.42
SPIDR-227ENST00000541342 FAM163BP0C2L3 166 aa17.7■□□□□ 0.42
SPIDR-227ENST00000541342 SERPINB4P48594 390 aa17.7■□□□□ 0.42
SPIDR-227ENST00000541342 HDAC4P56524 1084 aa17.7■□□□□ 0.42
SPIDR-227ENST00000541342 TIGD5Q53EQ6 642 aa17.7■□□□□ 0.42
SPIDR-227ENST00000541342 RFX6Q8HWS3 928 aa17.7■□□□□ 0.42
SPIDR-227ENST00000541342 OXNAD1Q96HP4 312 aaPredicted RBP17.7■□□□□ 0.42
SPIDR-227ENST00000541342 HSFY1Q96LI6 401 aa17.7■□□□□ 0.42
SPIDR-227ENST00000541342 MECRQ9BV79 373 aa17.7■□□□□ 0.42
SPIDR-227ENST00000541342 CALN1Q9BXU9 219 aa17.7■□□□□ 0.42
SPIDR-227ENST00000541342 STOML1Q9UBI4 398 aa17.7■□□□□ 0.42
SPIDR-227ENST00000541342 A0A1W2PQ45 241 aaPredicted RBP17.69■□□□□ 0.42
SPIDR-227ENST00000541342 A0A1W2PQY0 241 aa17.69■□□□□ 0.42
SPIDR-227ENST00000541342 I3L4J1 428 aa17.69■□□□□ 0.42
SPIDR-227ENST00000541342 PRPSAP2O60256 369 aa17.69■□□□□ 0.42
SPIDR-227ENST00000541342 VHLP40337 213 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms