RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 FAM186AA6NE01 2351 aa11.02□□□□□ -0.65
ATL3-204ENST00000540699 LEFTY2O00292 366 aa11.01□□□□□ -0.65
ATL3-204ENST00000540699 CHADO15335 359 aa11.01□□□□□ -0.65
ATL3-204ENST00000540699 GREM1O60565 184 aa11.01□□□□□ -0.65
ATL3-204ENST00000540699 HSF2BPO75031 334 aa11.01□□□□□ -0.65
ATL3-204ENST00000540699 MBL2P11226 248 aaPredicted RBP11.01□□□□□ -0.65
ATL3-204ENST00000540699 PSMA2P25787 234 aa11.01□□□□□ -0.65
ATL3-204ENST00000540699 FLT3P36888 993 aa11.01□□□□□ -0.65
ATL3-204ENST00000540699 ZNF143P52747 638 aaPredicted RBP11.01□□□□□ -0.65
ATL3-204ENST00000540699 YWHAZP63104 245 aaKnown RBP11.01□□□□□ -0.65
ATL3-204ENST00000540699 NAA30Q147X3 362 aaPredicted RBP11.01□□□□□ -0.65
ATL3-204ENST00000540699 ACAP1Q15027 740 aa11.01□□□□□ -0.65
ATL3-204ENST00000540699 TAF5Q15542 800 aa11.01□□□□□ -0.65
ATL3-204ENST00000540699 EFHC1Q5JVL4 640 aa11.01□□□□□ -0.65
ATL3-204ENST00000540699 C10orf120Q5SQS8 335 aa11.01□□□□□ -0.65
ATL3-204ENST00000540699 LRRC38Q5VT99 294 aa11.01□□□□□ -0.65
ATL3-204ENST00000540699 DAB2IPQ5VWQ8 1189 aa11.01□□□□□ -0.65
ATL3-204ENST00000540699 BTBD8Q5XKL5 378 aa11.01□□□□□ -0.65
ATL3-204ENST00000540699 UBL4BQ8N7F7 174 aa11.01□□□□□ -0.65
ATL3-204ENST00000540699 ST13P5Q8NFI4 369 aaPredicted RBP11.01□□□□□ -0.65
ATL3-204ENST00000540699 SH3RF2Q8TEC5 729 aa11.01□□□□□ -0.65
ATL3-204ENST00000540699 DNASE1L2Q92874 299 aa11.01□□□□□ -0.65
ATL3-204ENST00000540699 SLC2A13Q96QE2 648 aa11.01□□□□□ -0.65
ATL3-204ENST00000540699 FAM83CQ9BQN1 747 aa11.01□□□□□ -0.65
ATL3-204ENST00000540699 TRMT61BQ9BVS5 477 aaKnown RBP11.01□□□□□ -0.65
ATL3-204ENST00000540699 DNMT3LQ9UJW3 386 aa11.01□□□□□ -0.65
ATL3-204ENST00000540699 MIA3Q5JRA6 1907 aa11.01□□□□□ -0.65
ATL3-204ENST00000540699 KIAA1549LQ6ZVL6 1849 aa11□□□□□ -0.65
ATL3-204ENST00000540699 PTPRZ1P23471 2315 aaPredicted RBP11□□□□□ -0.65
ATL3-204ENST00000540699 E2F8A0AVK6 867 aa11□□□□□ -0.65
ATL3-204ENST00000540699 PROB1E7EW31 1015 aa11□□□□□ -0.65
ATL3-204ENST00000540699 PGRMC1O00264 195 aaKnown RBP11□□□□□ -0.65
ATL3-204ENST00000540699 GALR2O43603 387 aaPredicted RBP11□□□□□ -0.65
ATL3-204ENST00000540699 NARSO43776 548 aaKnown RBP11□□□□□ -0.65
ATL3-204ENST00000540699 CEP104O60308 925 aa11□□□□□ -0.65
ATL3-204ENST00000540699 LRCH4O75427 683 aa11□□□□□ -0.65
ATL3-204ENST00000540699 IGLV3-25P01717 112 aa11□□□□□ -0.65
ATL3-204ENST00000540699 PYGMP11217 842 aa11□□□□□ -0.65
ATL3-204ENST00000540699 TCF4P15884 667 aa11□□□□□ -0.65
ATL3-204ENST00000540699 GPD1P21695 349 aa11□□□□□ -0.65
ATL3-204ENST00000540699 PAFAH1B1P43034 410 aa11□□□□□ -0.65
ATL3-204ENST00000540699 RWDD2BP57060 319 aa11□□□□□ -0.65
ATL3-204ENST00000540699 SLC25A11Q02978 314 aaKnown RBP11□□□□□ -0.65
ATL3-204ENST00000540699 EIF4EBP2Q13542 120 aaPredicted RBP11□□□□□ -0.65
ATL3-204ENST00000540699 GRM2Q14416 872 aa11□□□□□ -0.65
ATL3-204ENST00000540699 CC2D1AQ6P1N0 951 aaPredicted RBP11□□□□□ -0.65
ATL3-204ENST00000540699 RHOT1Q8IXI2 618 aa11□□□□□ -0.65
ATL3-204ENST00000540699 KATNAL2Q8IYT4 538 aa11□□□□□ -0.65
ATL3-204ENST00000540699 MMGT1Q8N4V1 131 aa11□□□□□ -0.65
ATL3-204ENST00000540699 TMEM105Q8N8V8 129 aa11□□□□□ -0.65
ATL3-204ENST00000540699 NOA1Q8NC60 698 aaKnown RBP11□□□□□ -0.65
ATL3-204ENST00000540699 SPATA4Q8NEY3 305 aa11□□□□□ -0.65
ATL3-204ENST00000540699 RXFP2Q8WXD0 754 aa11□□□□□ -0.65
ATL3-204ENST00000540699 EDEM1Q92611 657 aa11□□□□□ -0.65
ATL3-204ENST00000540699 GOLGA1Q92805 767 aa11□□□□□ -0.65
ATL3-204ENST00000540699 CNPY3Q9BT09 278 aa11□□□□□ -0.65
ATL3-204ENST00000540699 POPDC2Q9HBU9 364 aa11□□□□□ -0.65
ATL3-204ENST00000540699 NUDT5Q9UKK9 219 aa11□□□□□ -0.65
ATL3-204ENST00000540699 HBS1LQ9Y450 684 aaKnown RBP11□□□□□ -0.65
ATL3-204ENST00000540699 DCHS1Q96JQ0 3298 aa10.99□□□□□ -0.65
ATL3-204ENST00000540699 ZNF292O60281 2723 aa10.99□□□□□ -0.65
ATL3-204ENST00000540699 MDM4O15151 490 aa10.99□□□□□ -0.65
ATL3-204ENST00000540699 DAB1O75553 588 aa10.99□□□□□ -0.65
ATL3-204ENST00000540699 GRAP2O75791 330 aa10.99□□□□□ -0.65
ATL3-204ENST00000540699 IGLV3-27P01718 113 aa10.99□□□□□ -0.65
ATL3-204ENST00000540699 PDGFRAP16234 1089 aa10.99□□□□□ -0.65
ATL3-204ENST00000540699 GDI1P31150 447 aa10.99□□□□□ -0.65
ATL3-204ENST00000540699 PCK1P35558 622 aa10.99□□□□□ -0.65
ATL3-204ENST00000540699 PTPN9P43378 593 aa10.99□□□□□ -0.65
ATL3-204ENST00000540699 MLLT6P55198 1093 aaPredicted RBP10.99□□□□□ -0.65
ATL3-204ENST00000540699 COG7P83436 770 aa10.99□□□□□ -0.65
ATL3-204ENST00000540699 PFKPQ01813 784 aa10.99□□□□□ -0.65
ATL3-204ENST00000540699 RING1Q06587 406 aa10.99□□□□□ -0.65
ATL3-204ENST00000540699 C2orf54Q08AI8 447 aa10.99□□□□□ -0.65
ATL3-204ENST00000540699 EFEMP1Q12805 493 aa10.99□□□□□ -0.65
ATL3-204ENST00000540699 ZNF211Q13398 564 aaPredicted RBP10.99□□□□□ -0.65
ATL3-204ENST00000540699 NNTQ13423 1086 aa10.99□□□□□ -0.65
ATL3-204ENST00000540699 PDGFRLQ15198 375 aa10.99□□□□□ -0.65
ATL3-204ENST00000540699 TRIP4Q15650 581 aaPredicted RBP10.99□□□□□ -0.65
ATL3-204ENST00000540699 ERCC6LQ2NKX8 1250 aa10.99□□□□□ -0.65
ATL3-204ENST00000540699 CCDC14Q49A88 953 aa10.99□□□□□ -0.65
ATL3-204ENST00000540699 CCDC181Q5TID7 509 aa10.99□□□□□ -0.65
ATL3-204ENST00000540699 TXNRD3NBQ6F5E7 133 aa10.99□□□□□ -0.65
ATL3-204ENST00000540699 AADACL2Q6P093 401 aa10.99□□□□□ -0.65
ATL3-204ENST00000540699 Q6ZNB5 142 aa10.99□□□□□ -0.65
ATL3-204ENST00000540699 CYP4V2Q6ZWL3 525 aaPredicted RBP10.99□□□□□ -0.65
ATL3-204ENST00000540699 HTR3DQ70Z44 454 aa10.99□□□□□ -0.65
ATL3-204ENST00000540699 BNIPLQ7Z465 357 aa10.99□□□□□ -0.65
ATL3-204ENST00000540699 POLNQ7Z5Q5 900 aa10.99□□□□□ -0.65
ATL3-204ENST00000540699 RNF139Q8WU17 664 aa10.99□□□□□ -0.65
ATL3-204ENST00000540699 TSC1Q92574 1164 aa10.99□□□□□ -0.65
ATL3-204ENST00000540699 IRF7Q92985 503 aa10.99□□□□□ -0.65
ATL3-204ENST00000540699 NT5C3BQ969T7 300 aa10.99□□□□□ -0.65
ATL3-204ENST00000540699 WBP2Q969T9 261 aa10.99□□□□□ -0.65
ATL3-204ENST00000540699 DDX23Q9BUQ8 820 aaKnown RBP10.99□□□□□ -0.65
ATL3-204ENST00000540699 ADAM33Q9BZ11 813 aa10.99□□□□□ -0.65
ATL3-204ENST00000540699 NACA2Q9H009 215 aa10.99□□□□□ -0.65
ATL3-204ENST00000540699 GKN1Q9NS71 199 aa10.99□□□□□ -0.65
ATL3-204ENST00000540699 RBM12Q9NTZ6 932 aaKnown RBP10.99□□□□□ -0.65
ATL3-204ENST00000540699 THG1LQ9NWX6 298 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms