RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 ZNF778Q96MU6 729 aa14.55□□□□□ -0.08
INO80E-203ENST00000540562 MED10Q9BTT4 135 aa14.55□□□□□ -0.08
INO80E-203ENST00000540562 CNTN3Q9P232 1028 aa14.55□□□□□ -0.08
INO80E-203ENST00000540562 MEIS3P2A8K0S8 358 aa14.54□□□□□ -0.08
INO80E-203ENST00000540562 SPECC1L-ADORA2AF8WAN1 911 aa14.54□□□□□ -0.08
INO80E-203ENST00000540562 M0QYT0 321 aa14.54□□□□□ -0.08
INO80E-203ENST00000540562 RARBP10826 455 aa14.54□□□□□ -0.08
INO80E-203ENST00000540562 ARHGAP1Q07960 439 aa14.54□□□□□ -0.08
INO80E-203ENST00000540562 PDE1CQ14123 709 aaPredicted RBP14.54□□□□□ -0.08
INO80E-203ENST00000540562 TAZQ16635 292 aa14.54□□□□□ -0.08
INO80E-203ENST00000540562 SCUBE1Q8IWY4 988 aa14.54□□□□□ -0.08
INO80E-203ENST00000540562 ULK2Q8IYT8 1036 aa14.54□□□□□ -0.08
INO80E-203ENST00000540562 SNX31Q8N9S9 440 aa14.54□□□□□ -0.08
INO80E-203ENST00000540562 TTC16Q8NEE8 873 aa14.54□□□□□ -0.08
INO80E-203ENST00000540562 HTR3CQ8WXA8 447 aa14.54□□□□□ -0.08
INO80E-203ENST00000540562 ZNF669Q96BR6 464 aaPredicted RBP14.54□□□□□ -0.08
INO80E-203ENST00000540562 SGF29Q96ES7 293 aa14.54□□□□□ -0.08
INO80E-203ENST00000540562 XPNPEP3Q9NQH7 507 aa14.54□□□□□ -0.08
INO80E-203ENST00000540562 KLHL8Q9P2G9 620 aaPredicted RBP14.54□□□□□ -0.08
INO80E-203ENST00000540562 DCXO43602 365 aa14.54□□□□□ -0.08
INO80E-203ENST00000540562 ATP6V1C1P21283 382 aa14.54□□□□□ -0.08
INO80E-203ENST00000540562 NCBP2-AS2Q69YL0 99 aa14.54□□□□□ -0.08
INO80E-203ENST00000540562 PLPPR4Q7Z2D5 763 aa14.54□□□□□ -0.08
INO80E-203ENST00000540562 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.54□□□□□ -0.08
INO80E-203ENST00000540562 PHTF2Q8N3S3 785 aa14.54□□□□□ -0.08
INO80E-203ENST00000540562 MTBPQ96DY7 904 aa14.54□□□□□ -0.08
INO80E-203ENST00000540562 MFSD3Q96ES6 412 aa14.54□□□□□ -0.08
INO80E-203ENST00000540562 P2RY11Q96G91 374 aa14.54□□□□□ -0.08
INO80E-203ENST00000540562 PRDM12Q9H4Q4 367 aa14.54□□□□□ -0.08
INO80E-203ENST00000540562 NUDT5Q9UKK9 219 aa14.54□□□□□ -0.08
INO80E-203ENST00000540562 PLA2G4CQ9UP65 541 aa14.54□□□□□ -0.08
INO80E-203ENST00000540562 EFR3BQ9Y2G0 817 aa14.54□□□□□ -0.08
INO80E-203ENST00000540562 MCF2P10911 925 aa14.53□□□□□ -0.08
INO80E-203ENST00000540562 ARSAP15289 507 aa14.53□□□□□ -0.08
INO80E-203ENST00000540562 SERPINB6P35237 376 aa14.53□□□□□ -0.08
INO80E-203ENST00000540562 GNL1P36915 607 aaPredicted RBP14.53□□□□□ -0.08
INO80E-203ENST00000540562 VHLP40337 213 aa14.53□□□□□ -0.08
INO80E-203ENST00000540562 ARL4AP40617 200 aa14.53□□□□□ -0.08
INO80E-203ENST00000540562 KLC1Q07866 573 aa14.53□□□□□ -0.08
INO80E-203ENST00000540562 ZNF460Q14592 562 aa14.53□□□□□ -0.08
INO80E-203ENST00000540562 STILQ15468 1287 aa14.53□□□□□ -0.08
INO80E-203ENST00000540562 GRIK4Q16099 956 aa14.53□□□□□ -0.08
INO80E-203ENST00000540562 HSP90AA5PQ58FG0 334 aa14.53□□□□□ -0.08
INO80E-203ENST00000540562 CFAP157Q5JU67 520 aa14.53□□□□□ -0.08
INO80E-203ENST00000540562 ATG16L1Q676U5 607 aa14.53□□□□□ -0.08
INO80E-203ENST00000540562 DPY19L2Q6NUT2 758 aa14.53□□□□□ -0.08
INO80E-203ENST00000540562 SPDYE1Q8NFV5 336 aaPredicted RBP14.53□□□□□ -0.08
INO80E-203ENST00000540562 FBXO41Q8TF61 875 aa14.53□□□□□ -0.08
INO80E-203ENST00000540562 TFB1MQ8WVM0 346 aaKnown RBP14.53□□□□□ -0.08
INO80E-203ENST00000540562 ATXN3LQ9H3M9 355 aa14.53□□□□□ -0.08
INO80E-203ENST00000540562 SAR1AQ9NR31 198 aa14.53□□□□□ -0.08
INO80E-203ENST00000540562 MTMR10Q9NXD2 777 aa14.53□□□□□ -0.08
INO80E-203ENST00000540562 DOCK1Q14185 1865 aa14.53□□□□□ -0.08
INO80E-203ENST00000540562 CFLARO15519 480 aa14.53□□□□□ -0.08
INO80E-203ENST00000540562 BPGMP07738 259 aa14.53□□□□□ -0.08
INO80E-203ENST00000540562 TCN1P20061 433 aaPredicted RBP14.53□□□□□ -0.08
INO80E-203ENST00000540562 SERPINB5P36952 375 aa14.53□□□□□ -0.08
INO80E-203ENST00000540562 SLC1A6P48664 564 aa14.53□□□□□ -0.08
INO80E-203ENST00000540562 AFF1P51825 1210 aaKnown RBP14.53□□□□□ -0.08
INO80E-203ENST00000540562 MAP3K7CLP57077 242 aa14.53□□□□□ -0.08
INO80E-203ENST00000540562 GRM1Q13255 1194 aa14.53□□□□□ -0.08
INO80E-203ENST00000540562 WASHC2DQ5SRD0 308 aa14.53□□□□□ -0.08
INO80E-203ENST00000540562 MTHFD1LQ6UB35 978 aa14.53□□□□□ -0.08
INO80E-203ENST00000540562 PIGZQ86VD9 579 aa14.53□□□□□ -0.08
INO80E-203ENST00000540562 SLC7A14Q8TBB6 771 aa14.53□□□□□ -0.08
INO80E-203ENST00000540562 SH3TC2Q8TF17 1288 aa14.53□□□□□ -0.08
INO80E-203ENST00000540562 HASPINQ8TF76 798 aa14.53□□□□□ -0.08
INO80E-203ENST00000540562 SLC35F5Q8WV83 523 aa14.53□□□□□ -0.08
INO80E-203ENST00000540562 ZNF333Q96JL9 665 aa14.53□□□□□ -0.08
INO80E-203ENST00000540562 PSME4Q14997 1843 aa14.53□□□□□ -0.08
INO80E-203ENST00000540562 DYNC1LI2O43237 492 aaPredicted RBP14.52□□□□□ -0.08
INO80E-203ENST00000540562 GABRB2P47870 512 aa14.52□□□□□ -0.08
INO80E-203ENST00000540562 SLC18A1P54219 525 aa14.52□□□□□ -0.08
INO80E-203ENST00000540562 SLC34A1Q06495 639 aa14.52□□□□□ -0.08
INO80E-203ENST00000540562 SOX4Q06945 474 aaPredicted RBP14.52□□□□□ -0.08
INO80E-203ENST00000540562 ENPEPQ07075 957 aa14.52□□□□□ -0.08
INO80E-203ENST00000540562 CUL3Q13618 768 aa14.52□□□□□ -0.08
INO80E-203ENST00000540562 DPP9Q86TI2 863 aa14.52□□□□□ -0.08
INO80E-203ENST00000540562 PPFIBP2Q8ND30 876 aa14.52□□□□□ -0.08
INO80E-203ENST00000540562 TMEM40Q8WWA1 233 aa14.52□□□□□ -0.08
INO80E-203ENST00000540562 KCNK16Q96T55 309 aa14.52□□□□□ -0.08
INO80E-203ENST00000540562 WWP1Q9H0M0 922 aa14.52□□□□□ -0.08
INO80E-203ENST00000540562 SNX25Q9H3E2 840 aa14.52□□□□□ -0.08
INO80E-203ENST00000540562 WDR55Q9H6Y2 383 aaPredicted RBP14.52□□□□□ -0.08
INO80E-203ENST00000540562 CIB2O75838 187 aa14.52□□□□□ -0.08
INO80E-203ENST00000540562 OCRLQ01968 901 aa14.52□□□□□ -0.08
INO80E-203ENST00000540562 CERCAMQ5T4B2 595 aa14.52□□□□□ -0.08
INO80E-203ENST00000540562 RAPH1Q70E73 1250 aa14.52□□□□□ -0.08
INO80E-203ENST00000540562 HPS6Q86YV9 775 aa14.52□□□□□ -0.08
INO80E-203ENST00000540562 CDKL3Q8IVW4 592 aaPredicted RBP14.52□□□□□ -0.08
INO80E-203ENST00000540562 DNAJB3Q8WWF6 145 aa14.52□□□□□ -0.08
INO80E-203ENST00000540562 KRT82Q9NSB4 513 aa14.52□□□□□ -0.08
INO80E-203ENST00000540562 PHGDHO43175 533 aaKnown RBP14.52□□□□□ -0.09
INO80E-203ENST00000540562 MAP3K7O43318 606 aa14.52□□□□□ -0.09
INO80E-203ENST00000540562 MT-CO1P00395 513 aa14.52□□□□□ -0.09
INO80E-203ENST00000540562 SRGAP2BP0DMP2 458 aa14.52□□□□□ -0.09
INO80E-203ENST00000540562 ETS2P15036 469 aa14.52□□□□□ -0.09
INO80E-203ENST00000540562 TNFAIP2Q03169 654 aa14.52□□□□□ -0.09
INO80E-203ENST00000540562 PDK2Q15119 407 aa14.52□□□□□ -0.09
INO80E-203ENST00000540562 MPHOSPH6Q99547 160 aaKnown RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms