RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 ULBP1Q9BZM6 244 aa18.47■□□□□ 0.55
GNE-204ENST00000539208 IQCGQ9H095 443 aaKnown RBP18.47■□□□□ 0.55
GNE-204ENST00000539208 RRN3Q9NYV6 651 aa18.47■□□□□ 0.55
GNE-204ENST00000539208 PLLPQ9Y342 182 aa18.47■□□□□ 0.55
GNE-204ENST00000539208 EEF2KO00418 725 aaKnown RBP18.47■□□□□ 0.55
GNE-204ENST00000539208 SERPINB4P48594 390 aa18.47■□□□□ 0.55
GNE-204ENST00000539208 CLCNKBP51801 687 aa18.47■□□□□ 0.55
GNE-204ENST00000539208 INHBEP58166 350 aa18.47■□□□□ 0.55
GNE-204ENST00000539208 AP1B1Q10567 949 aa18.47■□□□□ 0.55
GNE-204ENST00000539208 SEMA3BQ13214 749 aa18.47■□□□□ 0.55
GNE-204ENST00000539208 NME3Q13232 169 aa18.47■□□□□ 0.55
GNE-204ENST00000539208 GNASQ5JWF2 1037 aa18.47■□□□□ 0.55
GNE-204ENST00000539208 TRMT10BQ6PF06 316 aaKnown RBP18.47■□□□□ 0.55
GNE-204ENST00000539208 PDZD4Q76G19 769 aaPredicted RBP18.47■□□□□ 0.55
GNE-204ENST00000539208 TRPV1Q8NER1 839 aa18.47■□□□□ 0.55
GNE-204ENST00000539208 TTC17Q96AE7 1141 aa18.47■□□□□ 0.55
GNE-204ENST00000539208 PCED1BQ96HM7 432 aa18.47■□□□□ 0.55
GNE-204ENST00000539208 WDR6Q9NNW5 1121 aaKnown RBP18.47■□□□□ 0.55
GNE-204ENST00000539208 NPHS2Q9NP85 383 aa18.47■□□□□ 0.55
GNE-204ENST00000539208 TMPRSS4Q9NRS4 437 aa18.47■□□□□ 0.55
GNE-204ENST00000539208 MIOSQ9NXC5 875 aa18.47■□□□□ 0.55
GNE-204ENST00000539208 IGSF9Q9P2J2 1179 aa18.47■□□□□ 0.55
GNE-204ENST00000539208 MYBPHLA2RUH7 354 aa18.46■□□□□ 0.55
GNE-204ENST00000539208 YJEFN3A6XGL0 299 aa18.46■□□□□ 0.55
GNE-204ENST00000539208 E7ENQ6 273 aa18.46■□□□□ 0.55
GNE-204ENST00000539208 CAPN9O14815 690 aa18.46■□□□□ 0.55
GNE-204ENST00000539208 CREB3O43889 395 aa18.46■□□□□ 0.55
GNE-204ENST00000539208 WASHC5Q12768 1159 aa18.46■□□□□ 0.55
GNE-204ENST00000539208 DSTYKQ6XUX3 929 aa18.46■□□□□ 0.55
GNE-204ENST00000539208 NLRP9Q7RTR0 991 aa18.46■□□□□ 0.55
GNE-204ENST00000539208 SERINC5Q86VE9 423 aa18.46■□□□□ 0.55
GNE-204ENST00000539208 TRIM42Q8IWZ5 723 aa18.46■□□□□ 0.55
GNE-204ENST00000539208 ZMIZ2Q8NF64 920 aa18.46■□□□□ 0.55
GNE-204ENST00000539208 NAT9Q9BTE0 207 aa18.46■□□□□ 0.55
GNE-204ENST00000539208 TRIM55Q9BYV6 548 aa18.46■□□□□ 0.55
GNE-204ENST00000539208 UPF3AQ9H1J1 476 aaKnown RBP18.46■□□□□ 0.55
GNE-204ENST00000539208 PRDM12Q9H4Q4 367 aa18.46■□□□□ 0.55
GNE-204ENST00000539208 FBXW11Q9UKB1 542 aa18.46■□□□□ 0.55
GNE-204ENST00000539208 SCN10AQ9Y5Y9 1956 aa18.46■□□□□ 0.55
GNE-204ENST00000539208 SYNJ2BP-COX16A0A087WUM0 186 aa18.45■□□□□ 0.54
GNE-204ENST00000539208 ARL5CA6NH57 179 aa18.45■□□□□ 0.54
GNE-204ENST00000539208 CHRNA1P02708 482 aa18.45■□□□□ 0.54
GNE-204ENST00000539208 SLC8A1P32418 973 aa18.45■□□□□ 0.54
GNE-204ENST00000539208 ZNF135P52742 658 aaPredicted RBP18.45■□□□□ 0.54
GNE-204ENST00000539208 PLEKHG4Q58EX7 1191 aa18.45■□□□□ 0.54
GNE-204ENST00000539208 GDF6Q6KF10 455 aaPredicted RBP18.45■□□□□ 0.54
GNE-204ENST00000539208 CDHR3Q6ZTQ4 885 aa18.45■□□□□ 0.54
GNE-204ENST00000539208 RNF169Q8NCN4 708 aa18.45■□□□□ 0.54
GNE-204ENST00000539208 SLC7A14Q8TBB6 771 aa18.45■□□□□ 0.54
GNE-204ENST00000539208 INPP5DQ92835 1189 aa18.45■□□□□ 0.54
GNE-204ENST00000539208 LRMDAQ9H2I8 198 aa18.45■□□□□ 0.54
GNE-204ENST00000539208 NOD2Q9HC29 1040 aa18.45■□□□□ 0.54
GNE-204ENST00000539208 ZFYVE28Q9HCC9 887 aa18.45■□□□□ 0.54
GNE-204ENST00000539208 CSNK1G1Q9HCP0 422 aa18.45■□□□□ 0.54
GNE-204ENST00000539208 COX16Q9P0S2 106 aa18.45■□□□□ 0.54
GNE-204ENST00000539208 NR2E3Q9Y5X4 410 aa18.45■□□□□ 0.54
GNE-204ENST00000539208 HMX2A2RU54 273 aa18.45■□□□□ 0.54
GNE-204ENST00000539208 HHLA1C9JL84 531 aa18.45■□□□□ 0.54
GNE-204ENST00000539208 GPR182O15218 404 aa18.45■□□□□ 0.54
GNE-204ENST00000539208 NCAM2O15394 837 aa18.45■□□□□ 0.54
GNE-204ENST00000539208 UGT1A9O60656 530 aa18.45■□□□□ 0.54
GNE-204ENST00000539208 KRT16P08779 473 aa18.45■□□□□ 0.54
GNE-204ENST00000539208 PCSK1P29120 753 aa18.45■□□□□ 0.54
GNE-204ENST00000539208 NKX3-2P78367 333 aa18.45■□□□□ 0.54
GNE-204ENST00000539208 MGAT3Q09327 533 aa18.45■□□□□ 0.54
GNE-204ENST00000539208 NAB1Q13506 487 aa18.45■□□□□ 0.54
GNE-204ENST00000539208 AGMOQ6ZNB7 445 aa18.45■□□□□ 0.54
GNE-204ENST00000539208 MARK2Q7KZI7 788 aaKnown RBP18.45■□□□□ 0.54
GNE-204ENST00000539208 PDCD7Q8N8D1 485 aaKnown RBP18.45■□□□□ 0.54
GNE-204ENST00000539208 UGT1A7Q9HAW7 530 aa18.45■□□□□ 0.54
GNE-204ENST00000539208 UGT1A10Q9HAW8 530 aa18.45■□□□□ 0.54
GNE-204ENST00000539208 UGT1A8Q9HAW9 530 aa18.45■□□□□ 0.54
GNE-204ENST00000539208 CD248Q9HCU0 757 aa18.45■□□□□ 0.54
GNE-204ENST00000539208 HGSO14964 777 aaPredicted RBP18.44■□□□□ 0.54
GNE-204ENST00000539208 F9P00740 461 aa18.44■□□□□ 0.54
GNE-204ENST00000539208 LTFP02788 710 aa18.44■□□□□ 0.54
GNE-204ENST00000539208 CRHR1P34998 444 aa18.44■□□□□ 0.54
GNE-204ENST00000539208 AFF1P51825 1210 aaKnown RBP18.44■□□□□ 0.54
GNE-204ENST00000539208 UPP1Q16831 310 aa18.44■□□□□ 0.54
GNE-204ENST00000539208 INTS6LQ5JSJ4 861 aaKnown RBP18.44■□□□□ 0.54
GNE-204ENST00000539208 ZNF567Q8N184 647 aa18.44■□□□□ 0.54
GNE-204ENST00000539208 CCNYQ8ND76 341 aa18.44■□□□□ 0.54
GNE-204ENST00000539208 C3orf58Q8NDZ4 430 aa18.44■□□□□ 0.54
GNE-204ENST00000539208 DEPDC1BQ8WUY9 529 aa18.44■□□□□ 0.54
GNE-204ENST00000539208 SMARCD1Q96GM5 515 aa18.44■□□□□ 0.54
GNE-204ENST00000539208 TMEM237Q96Q45 408 aa18.44■□□□□ 0.54
GNE-204ENST00000539208 RAB3IPQ96QF0 476 aaPredicted RBP18.44■□□□□ 0.54
GNE-204ENST00000539208 KCNK16Q96T55 309 aa18.44■□□□□ 0.54
GNE-204ENST00000539208 TRIM56Q9BRZ2 755 aaKnown RBP18.44■□□□□ 0.54
GNE-204ENST00000539208 BRD8Q9H0E9 1235 aa18.44■□□□□ 0.54
GNE-204ENST00000539208 ALG13Q9NP73 1137 aaKnown RBP18.44■□□□□ 0.54
GNE-204ENST00000539208 SAR1AQ9NR31 198 aa18.44■□□□□ 0.54
GNE-204ENST00000539208 KANSL3Q9P2N6 904 aa18.44■□□□□ 0.54
GNE-204ENST00000539208 CACNG4Q9UBN1 327 aa18.44■□□□□ 0.54
GNE-204ENST00000539208 WDR27A2RRH5 827 aa18.44■□□□□ 0.54
GNE-204ENST00000539208 ZNF623O75123 536 aa18.44■□□□□ 0.54
GNE-204ENST00000539208 CYBAP13498 195 aa18.44■□□□□ 0.54
GNE-204ENST00000539208 PGAM1P18669 254 aa18.44■□□□□ 0.54
GNE-204ENST00000539208 BGNP21810 368 aa18.44■□□□□ 0.54
GNE-204ENST00000539208 ARL13BQ3SXY8 428 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms