RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 RING1Q06587 406 aa17.86■□□□□ 0.45
CLN6-202ENST00000538696 HTR4Q13639 388 aa17.86■□□□□ 0.45
CLN6-202ENST00000538696 AAK1Q2M2I8 961 aa17.86■□□□□ 0.45
CLN6-202ENST00000538696 ZC3H12AQ5D1E8 599 aaKnown RBP17.86■□□□□ 0.45
CLN6-202ENST00000538696 TANGO2Q6ICL3 276 aa17.86■□□□□ 0.45
CLN6-202ENST00000538696 PARM1Q6UWI2 310 aa17.86■□□□□ 0.45
CLN6-202ENST00000538696 DDX42Q86XP3 938 aaKnown RBP eCLIP17.86■□□□□ 0.45
CLN6-202ENST00000538696 KATNAL2Q8IYT4 538 aa17.86■□□□□ 0.45
CLN6-202ENST00000538696 CELF5Q8N6W0 485 aaKnown RBP17.86■□□□□ 0.45
CLN6-202ENST00000538696 FGF14Q92915 247 aa17.86■□□□□ 0.45
CLN6-202ENST00000538696 LRRC3BQ96PB8 259 aa17.86■□□□□ 0.45
CLN6-202ENST00000538696 EPC1Q9H2F5 836 aa17.86■□□□□ 0.45
CLN6-202ENST00000538696 OBP2AQ9NY56 170 aa17.86■□□□□ 0.45
CLN6-202ENST00000538696 C5orf42Q9H799 3197 aa17.86■□□□□ 0.45
CLN6-202ENST00000538696 XIRP2A4UGR9 3374 aa17.85■□□□□ 0.45
CLN6-202ENST00000538696 COL4A3Q01955 1670 aa17.85■□□□□ 0.45
CLN6-202ENST00000538696 HEPACAM2A8MVW5 462 aa17.85■□□□□ 0.45
CLN6-202ENST00000538696 ANHXE9PGG2 379 aa17.85■□□□□ 0.45
CLN6-202ENST00000538696 SCAMP3O14828 347 aaKnown RBP17.85■□□□□ 0.45
CLN6-202ENST00000538696 F9P00740 461 aa17.85■□□□□ 0.45
CLN6-202ENST00000538696 KRT1P04264 644 aa17.85■□□□□ 0.45
CLN6-202ENST00000538696 DESP17661 470 aa17.85■□□□□ 0.45
CLN6-202ENST00000538696 IL1R2P27930 398 aa17.85■□□□□ 0.45
CLN6-202ENST00000538696 CORO1AP31146 461 aaKnown RBP17.85■□□□□ 0.45
CLN6-202ENST00000538696 PPP2R5DQ14738 602 aa17.85■□□□□ 0.45
CLN6-202ENST00000538696 LONRF2Q1L5Z9 754 aa17.85■□□□□ 0.45
CLN6-202ENST00000538696 ATP13A4Q4VNC1 1196 aa17.85■□□□□ 0.45
CLN6-202ENST00000538696 LRRC38Q5VT99 294 aa17.85■□□□□ 0.45
CLN6-202ENST00000538696 VITQ6UXI7 678 aa17.85■□□□□ 0.45
CLN6-202ENST00000538696 FAM131BQ86XD5 332 aa17.85■□□□□ 0.45
CLN6-202ENST00000538696 ZDHHC14Q8IZN3 488 aa17.85■□□□□ 0.45
CLN6-202ENST00000538696 MMGT1Q8N4V1 131 aa17.85■□□□□ 0.45
CLN6-202ENST00000538696 TTC16Q8NEE8 873 aa17.85■□□□□ 0.45
CLN6-202ENST00000538696 KXD1Q9BQD3 176 aa17.85■□□□□ 0.45
CLN6-202ENST00000538696 PLA2G2FQ9BZM2 168 aa17.85■□□□□ 0.45
CLN6-202ENST00000538696 ZFP14Q9HCL3 533 aa17.85■□□□□ 0.45
CLN6-202ENST00000538696 ANLNQ9NQW6 1124 aa17.85■□□□□ 0.45
CLN6-202ENST00000538696 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.85■□□□□ 0.45
CLN6-202ENST00000538696 LOC730098B7Z3J9 87 aa17.84■□□□□ 0.45
CLN6-202ENST00000538696 I6L893 689 aaPredicted RBP17.84■□□□□ 0.45
CLN6-202ENST00000538696 ECI2O75521 394 aa17.84■□□□□ 0.45
CLN6-202ENST00000538696 KLKB1P03952 638 aa17.84■□□□□ 0.45
CLN6-202ENST00000538696 MIPP30301 263 aa17.84■□□□□ 0.45
CLN6-202ENST00000538696 ACAP1Q15027 740 aa17.84■□□□□ 0.45
CLN6-202ENST00000538696 NUGGCQ68CJ6 796 aa17.84■□□□□ 0.45
CLN6-202ENST00000538696 Q6ZNB5 142 aa17.84■□□□□ 0.45
CLN6-202ENST00000538696 MTSS1LQ765P7 747 aa17.84■□□□□ 0.45
CLN6-202ENST00000538696 SND1Q7KZF4 910 aaKnown RBP eCLIP17.84■□□□□ 0.457e-7■□□□□ 8.6
CLN6-202ENST00000538696 ADAT2Q7Z6V5 191 aaKnown RBP17.84■□□□□ 0.45
CLN6-202ENST00000538696 SLC13A5Q86YT5 568 aaPredicted RBP17.84■□□□□ 0.45
CLN6-202ENST00000538696 ATXN2LQ8WWM7 1075 aaKnown RBP17.84■□□□□ 0.45
CLN6-202ENST00000538696 ELSPBP1Q96BH3 223 aa17.84■□□□□ 0.45
CLN6-202ENST00000538696 PEBP4Q96S96 227 aa17.84■□□□□ 0.45
CLN6-202ENST00000538696 HERPUD2Q9BSE4 406 aa17.84■□□□□ 0.45
CLN6-202ENST00000538696 AP1M1Q9BXS5 423 aa17.84■□□□□ 0.45
CLN6-202ENST00000538696 ZWILCHQ9H900 591 aa17.84■□□□□ 0.45
CLN6-202ENST00000538696 ARHGEF38Q9NXL2 777 aa17.84■□□□□ 0.45
CLN6-202ENST00000538696 SH3BP1Q9Y3L3 701 aa17.84■□□□□ 0.45
CLN6-202ENST00000538696 NUMBLQ9Y6R0 609 aa17.84■□□□□ 0.45
CLN6-202ENST00000538696 MYO10Q9HD67 2058 aa17.84■□□□□ 0.45
CLN6-202ENST00000538696 COL4A2P08572 1712 aa17.84■□□□□ 0.45
CLN6-202ENST00000538696 TICRRQ7Z2Z1 1910 aa17.83■□□□□ 0.45
CLN6-202ENST00000538696 MYOFQ9NZM1 2061 aa17.83■□□□□ 0.45
CLN6-202ENST00000538696 TCRBV7S2A1N4TA0A589 114 aa17.83■□□□□ 0.44
CLN6-202ENST00000538696 KCNU1A8MYU2 1149 aa17.83■□□□□ 0.44
CLN6-202ENST00000538696 DYNC1I1O14576 645 aa17.83■□□□□ 0.44
CLN6-202ENST00000538696 RNF8O76064 485 aa17.83■□□□□ 0.44
CLN6-202ENST00000538696 MOCS2O96007 188 aaPredicted RBP17.83■□□□□ 0.44
CLN6-202ENST00000538696 APOEP02649 317 aa17.83■□□□□ 0.44
CLN6-202ENST00000538696 RHOXF2BP0C7M4 288 aa17.83■□□□□ 0.44
CLN6-202ENST00000538696 CCR1P32246 355 aa17.83■□□□□ 0.44
CLN6-202ENST00000538696 PCK1P35558 622 aa17.83■□□□□ 0.44
CLN6-202ENST00000538696 ZP2Q05996 745 aa17.83■□□□□ 0.44
CLN6-202ENST00000538696 LLGL1Q15334 1064 aa17.83■□□□□ 0.44
CLN6-202ENST00000538696 BRMS1LQ5PSV4 323 aa17.83■□□□□ 0.44
CLN6-202ENST00000538696 CYP4V2Q6ZWL3 525 aaPredicted RBP17.83■□□□□ 0.44
CLN6-202ENST00000538696 HTR3DQ70Z44 454 aa17.83■□□□□ 0.44
CLN6-202ENST00000538696 ANKS1BQ7Z6G8 1248 aa17.83■□□□□ 0.44
CLN6-202ENST00000538696 PLCD3Q8N3E9 789 aa17.83■□□□□ 0.44
CLN6-202ENST00000538696 CCDC185Q8N715 623 aa17.83■□□□□ 0.44
CLN6-202ENST00000538696 EXD1Q8NHP7 514 aa17.83■□□□□ 0.44
CLN6-202ENST00000538696 BPIFB1Q8TDL5 484 aa17.83■□□□□ 0.44
CLN6-202ENST00000538696 RNF34Q969K3 372 aa17.83■□□□□ 0.44
CLN6-202ENST00000538696 E2F7Q96AV8 911 aa17.83■□□□□ 0.44
CLN6-202ENST00000538696 RHOXF2Q9BQY4 288 aa17.83■□□□□ 0.44
CLN6-202ENST00000538696 RPP25Q9BUL9 199 aaKnown RBP17.83■□□□□ 0.44
CLN6-202ENST00000538696 TMPRSS4Q9NRS4 437 aa17.83■□□□□ 0.44
CLN6-202ENST00000538696 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.83■□□□□ 0.44
CLN6-202ENST00000538696 PCSK1NQ9UHG2 260 aa17.83■□□□□ 0.44
CLN6-202ENST00000538696 XPO7Q9UIA9 1087 aaKnown RBP17.83■□□□□ 0.44
CLN6-202ENST00000538696 LSM7Q9UK45 103 aaKnown RBP17.83■□□□□ 0.44
CLN6-202ENST00000538696 E2F8A0AVK6 867 aa17.82■□□□□ 0.44
CLN6-202ENST00000538696 PI4K2BG5E9Z4 385 aa17.82■□□□□ 0.44
CLN6-202ENST00000538696 KRIT1O00522 736 aa17.82■□□□□ 0.44
CLN6-202ENST00000538696 SLC2A3P11169 496 aa17.82■□□□□ 0.44
CLN6-202ENST00000538696 HARS2P49590 506 aaKnown RBP17.82■□□□□ 0.44
CLN6-202ENST00000538696 HADHQ16836 314 aaKnown RBP17.82■□□□□ 0.44
CLN6-202ENST00000538696 SMTNL2Q2TAL5 461 aa17.82■□□□□ 0.44
CLN6-202ENST00000538696 SCYL2Q6P3W7 929 aa17.82■□□□□ 0.44
CLN6-202ENST00000538696 POLNQ7Z5Q5 900 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms