RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 UCMAQ8WVF2 138 aa10.18□□□□□ -0.78
COL4A6-208ENST00000538570 CAVIN3Q969G5 261 aa10.18□□□□□ -0.78
COL4A6-208ENST00000538570 NSMCE2Q96MF7 247 aa10.18□□□□□ -0.78
COL4A6-208ENST00000538570 APOL4Q9BPW4 351 aa10.18□□□□□ -0.78
COL4A6-208ENST00000538570 DPY30Q9C005 99 aa10.18□□□□□ -0.78
COL4A6-208ENST00000538570 PRR23AA6NEV1 266 aa10.18□□□□□ -0.78
COL4A6-208ENST00000538570 C2CD2LO14523 706 aa10.18□□□□□ -0.78
COL4A6-208ENST00000538570 MSH4O15457 936 aa10.18□□□□□ -0.78
COL4A6-208ENST00000538570 NFICP08651 508 aa10.18□□□□□ -0.78
COL4A6-208ENST00000538570 ERVK-10P10266 1014 aa10.18□□□□□ -0.78
COL4A6-208ENST00000538570 SEPHS2Q99611 448 aa10.18□□□□□ -0.78
COL4A6-208ENST00000538570 EPB41L4AQ9HCS5 686 aaPredicted RBP10.18□□□□□ -0.78
COL4A6-208ENST00000538570 TCF7L2Q9NQB0 619 aa10.18□□□□□ -0.78
COL4A6-208ENST00000538570 CCDC59Q9P031 241 aaKnown RBP10.18□□□□□ -0.78
COL4A6-208ENST00000538570 ENOPH1Q9UHY7 261 aa10.18□□□□□ -0.78
COL4A6-208ENST00000538570 ATPIF1Q9UII2 106 aa10.18□□□□□ -0.78
COL4A6-208ENST00000538570 VANGL2Q9ULK5 521 aa10.18□□□□□ -0.78
COL4A6-208ENST00000538570 SNX8Q9Y5X2 465 aa10.18□□□□□ -0.78
COL4A6-208ENST00000538570 MAGEB16A2A368 324 aa10.17□□□□□ -0.78
COL4A6-208ENST00000538570 CNPP09543 421 aaKnown RBP10.17□□□□□ -0.78
COL4A6-208ENST00000538570 PABPC1P11940 636 aaKnown RBP10.17□□□□□ -0.78
COL4A6-208ENST00000538570 GZMAP12544 262 aa10.17□□□□□ -0.78
COL4A6-208ENST00000538570 FDPSP14324 419 aaKnown RBP10.17□□□□□ -0.78
COL4A6-208ENST00000538570 SKIV2L2P42285 1042 aaKnown RBP10.17□□□□□ -0.78
COL4A6-208ENST00000538570 NAMPTP43490 491 aa10.17□□□□□ -0.78
COL4A6-208ENST00000538570 GRB10Q13322 594 aa10.17□□□□□ -0.78
COL4A6-208ENST00000538570 MPZL3Q6UWV2 235 aa10.17□□□□□ -0.78
COL4A6-208ENST00000538570 DHFR2Q86XF0 187 aa10.17□□□□□ -0.78
COL4A6-208ENST00000538570 ADGRF2Q8IZF7 708 aa10.17□□□□□ -0.78
COL4A6-208ENST00000538570 GPRC5AQ8NFJ5 357 aa10.17□□□□□ -0.78
COL4A6-208ENST00000538570 FAM151AQ8WW52 585 aa10.17□□□□□ -0.78
COL4A6-208ENST00000538570 TAAR1Q96RJ0 339 aa10.17□□□□□ -0.78
COL4A6-208ENST00000538570 CGRRF1Q99675 332 aa10.17□□□□□ -0.78
COL4A6-208ENST00000538570 GRIP2Q9C0E4 1043 aa10.17□□□□□ -0.78
COL4A6-208ENST00000538570 ACTR8Q9H981 624 aa10.17□□□□□ -0.78
COL4A6-208ENST00000538570 AAASQ9NRG9 546 aa10.17□□□□□ -0.78
COL4A6-208ENST00000538570 CROTQ9UKG9 612 aa10.17□□□□□ -0.78
COL4A6-208ENST00000538570 STARD13Q9Y3M8 1113 aa10.17□□□□□ -0.78
COL4A6-208ENST00000538570 CAPN6Q9Y6Q1 641 aa10.17□□□□□ -0.78
COL4A6-208ENST00000538570 A0A1W2PRG6 482 aa10.17□□□□□ -0.78
COL4A6-208ENST00000538570 LSM8O95777 96 aaKnown RBP10.17□□□□□ -0.78
COL4A6-208ENST00000538570 ITGAXP20702 1163 aa10.17□□□□□ -0.78
COL4A6-208ENST00000538570 DSG3P32926 999 aa10.17□□□□□ -0.78
COL4A6-208ENST00000538570 ALDH5A1P51649 535 aaPredicted RBP10.17□□□□□ -0.78
COL4A6-208ENST00000538570 STX4Q12846 297 aa10.17□□□□□ -0.78
COL4A6-208ENST00000538570 SEZ6Q53EL9 994 aa10.17□□□□□ -0.78
COL4A6-208ENST00000538570 GLRA4Q5JXX5 417 aa10.17□□□□□ -0.78
COL4A6-208ENST00000538570 GRTP1Q5TC63 336 aa10.17□□□□□ -0.78
COL4A6-208ENST00000538570 KRT74Q7RTS7 529 aa10.17□□□□□ -0.78
COL4A6-208ENST00000538570 ERO1BQ86YB8 467 aa10.17□□□□□ -0.78
COL4A6-208ENST00000538570 COLGALT1Q8NBJ5 622 aa10.17□□□□□ -0.78
COL4A6-208ENST00000538570 SETD9Q8NE22 299 aa10.17□□□□□ -0.78
COL4A6-208ENST00000538570 BTBD10Q9BSF8 475 aa10.17□□□□□ -0.78
COL4A6-208ENST00000538570 HMG20AQ9NP66 347 aa10.17□□□□□ -0.78
COL4A6-208ENST00000538570 SPHKAPQ2M3C7 1700 aa10.17□□□□□ -0.78
COL4A6-208ENST00000538570 CRB1P82279 1406 aa10.17□□□□□ -0.78
COL4A6-208ENST00000538570 CYB561D2O14569 222 aa10.17□□□□□ -0.78
COL4A6-208ENST00000538570 PROSCO94903 275 aa10.17□□□□□ -0.78
COL4A6-208ENST00000538570 GTF2E2P29084 291 aaKnown RBP10.17□□□□□ -0.78
COL4A6-208ENST00000538570 PRKAA2P54646 552 aa10.17□□□□□ -0.78
COL4A6-208ENST00000538570 CCSAPQ6IQ19 270 aaPredicted RBP10.17□□□□□ -0.78
COL4A6-208ENST00000538570 PHACTR4Q8IZ21 702 aa10.17□□□□□ -0.78
COL4A6-208ENST00000538570 ENKURQ8TC29 256 aa10.17□□□□□ -0.78
COL4A6-208ENST00000538570 SLC20A1Q8WUM9 679 aa10.17□□□□□ -0.78
COL4A6-208ENST00000538570 KCTD4Q8WVF5 259 aa10.17□□□□□ -0.78
COL4A6-208ENST00000538570 CORO1CQ9ULV4 474 aaPredicted RBP10.17□□□□□ -0.78
COL4A6-208ENST00000538570 SLC37A4O43826 429 aa10.17□□□□□ -0.78
COL4A6-208ENST00000538570 TBC1D12O60347 775 aa10.17□□□□□ -0.78
COL4A6-208ENST00000538570 STAU1O95793 577 aaKnown RBP10.17□□□□□ -0.78
COL4A6-208ENST00000538570 ATP6V1C1P21283 382 aa10.17□□□□□ -0.78
COL4A6-208ENST00000538570 ITGA1P56199 1179 aa10.17□□□□□ -0.78
COL4A6-208ENST00000538570 HERVK_113P62684 666 aa10.17□□□□□ -0.78
COL4A6-208ENST00000538570 PRKAA1Q13131 559 aa10.17□□□□□ -0.78
COL4A6-208ENST00000538570 NEDD8Q15843 81 aa10.17□□□□□ -0.78
COL4A6-208ENST00000538570 PKN1Q16512 942 aa10.17□□□□□ -0.78
COL4A6-208ENST00000538570 DGUOKQ16854 277 aa10.17□□□□□ -0.78
COL4A6-208ENST00000538570 SWT1Q5T5J6 900 aaKnown RBP10.17□□□□□ -0.78
COL4A6-208ENST00000538570 MTSS1LQ765P7 747 aa10.17□□□□□ -0.78
COL4A6-208ENST00000538570 MIB1Q86YT6 1006 aa10.17□□□□□ -0.78
COL4A6-208ENST00000538570 SPPL2AQ8TCT8 520 aa10.17□□□□□ -0.78
COL4A6-208ENST00000538570 ZNF184Q99676 751 aaPredicted RBP10.17□□□□□ -0.78
COL4A6-208ENST00000538570 APOL2Q9BQE5 337 aa10.17□□□□□ -0.78
COL4A6-208ENST00000538570 TPRKBQ9Y3C4 175 aa10.17□□□□□ -0.78
COL4A6-208ENST00000538570 DUSP10Q9Y6W6 482 aa10.17□□□□□ -0.78
COL4A6-208ENST00000538570 PNMA8CA0A1B0GUJ8 204 aa10.17□□□□□ -0.78
COL4A6-208ENST00000538570 MTRF1O75570 445 aaKnown RBP10.17□□□□□ -0.78
COL4A6-208ENST00000538570 CTDNEP1O95476 244 aa10.17□□□□□ -0.78
COL4A6-208ENST00000538570 CCDC130P13994 396 aa10.17□□□□□ -0.78
COL4A6-208ENST00000538570 UTS2BQ765I0 119 aa10.17□□□□□ -0.78
COL4A6-208ENST00000538570 CBWD2Q8IUF1 395 aa10.17□□□□□ -0.78
COL4A6-208ENST00000538570 SYTL1Q8IYJ3 562 aa10.17□□□□□ -0.78
COL4A6-208ENST00000538570 MOSPD2Q8NHP6 518 aa10.17□□□□□ -0.78
COL4A6-208ENST00000538570 C1orf50Q9BV19 199 aa10.17□□□□□ -0.78
COL4A6-208ENST00000538570 SENP2Q9HC62 589 aa10.17□□□□□ -0.78
COL4A6-208ENST00000538570 RPRD1BQ9NQG5 326 aaKnown RBP10.17□□□□□ -0.78
COL4A6-208ENST00000538570 AHSPQ9NZD4 102 aa10.17□□□□□ -0.78
COL4A6-208ENST00000538570 MYRFQ9Y2G1 1151 aa10.17□□□□□ -0.78
COL4A6-208ENST00000538570 ERI2A8K979 691 aaKnown RBP10.16□□□□□ -0.78
COL4A6-208ENST00000538570 MEI4A8MW99 385 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 GPR182O15218 404 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms