RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 TBC1D31Q96DN5 1066 aa11.03□□□□□ -0.64
TNFRSF1A-211ENST00000538363 FCRL2Q96LA5 508 aaPredicted RBP11.03□□□□□ -0.64
TNFRSF1A-211ENST00000538363 KCTD15Q96SI1 283 aaPredicted RBP11.03□□□□□ -0.64
TNFRSF1A-211ENST00000538363 RNF38Q9H0F5 515 aa11.03□□□□□ -0.64
TNFRSF1A-211ENST00000538363 OSBPL2Q9H1P3 480 aa11.03□□□□□ -0.64
TNFRSF1A-211ENST00000538363 IL21Q9HBE4 155 aa11.03□□□□□ -0.64
TNFRSF1A-211ENST00000538363 PCDH18Q9HCL0 1135 aa11.03□□□□□ -0.64
TNFRSF1A-211ENST00000538363 DONSONQ9NYP3 566 aa11.03□□□□□ -0.64
TNFRSF1A-211ENST00000538363 CFAP97Q9P2B7 532 aa11.03□□□□□ -0.64
TNFRSF1A-211ENST00000538363 ZNF510Q9Y2H8 683 aa11.03□□□□□ -0.64
TNFRSF1A-211ENST00000538363 CLUHO75153 1309 aa11.03□□□□□ -0.64
TNFRSF1A-211ENST00000538363 SOBPA7XYQ1 873 aa11.02□□□□□ -0.65
TNFRSF1A-211ENST00000538363 H7C0C1 242 aa11.02□□□□□ -0.65
TNFRSF1A-211ENST00000538363 CCDC188H7C350 402 aa11.02□□□□□ -0.65
TNFRSF1A-211ENST00000538363 LINC01565O15544 149 aa11.02□□□□□ -0.65
TNFRSF1A-211ENST00000538363 ACSL4O60488 711 aa11.02□□□□□ -0.65
TNFRSF1A-211ENST00000538363 OAS1P00973 400 aaKnown RBP11.02□□□□□ -0.65
TNFRSF1A-211ENST00000538363 CYBBP04839 570 aa11.02□□□□□ -0.65
TNFRSF1A-211ENST00000538363 POU2F2P09086 479 aa11.02□□□□□ -0.65
TNFRSF1A-211ENST00000538363 EPHB2P29323 1055 aa11.02□□□□□ -0.65
TNFRSF1A-211ENST00000538363 GBP2P32456 591 aaPredicted RBP11.02□□□□□ -0.65
TNFRSF1A-211ENST00000538363 MTHFRP42898 656 aa11.02□□□□□ -0.65
TNFRSF1A-211ENST00000538363 ATP5OP48047 213 aa11.02□□□□□ -0.65
TNFRSF1A-211ENST00000538363 TUBB4BP68371 445 aa11.02□□□□□ -0.65
TNFRSF1A-211ENST00000538363 ITIH3Q06033 890 aa11.02□□□□□ -0.65
TNFRSF1A-211ENST00000538363 RING1Q06587 406 aa11.02□□□□□ -0.65
TNFRSF1A-211ENST00000538363 C2orf54Q08AI8 447 aa11.02□□□□□ -0.65
TNFRSF1A-211ENST00000538363 MMRN1Q13201 1228 aa11.02□□□□□ -0.65
TNFRSF1A-211ENST00000538363 ADAM15Q13444 863 aa11.02□□□□□ -0.65
TNFRSF1A-211ENST00000538363 SNX1Q13596 522 aa11.02□□□□□ -0.65
TNFRSF1A-211ENST00000538363 CCDC85BQ15834 202 aaPredicted RBP11.02□□□□□ -0.65
TNFRSF1A-211ENST00000538363 CA9Q16790 459 aa11.02□□□□□ -0.65
TNFRSF1A-211ENST00000538363 ANKRD20A8PQ5CZ79 823 aa11.02□□□□□ -0.65
TNFRSF1A-211ENST00000538363 RAP1GAP2Q684P5 730 aa11.02□□□□□ -0.65
TNFRSF1A-211ENST00000538363 TMCO3Q6UWJ1 677 aa11.02□□□□□ -0.65
TNFRSF1A-211ENST00000538363 GET4Q7L5D6 327 aaPredicted RBP11.02□□□□□ -0.65
TNFRSF1A-211ENST00000538363 GPR149Q86SP6 731 aa11.02□□□□□ -0.65
TNFRSF1A-211ENST00000538363 TMC8Q8IU68 726 aa11.02□□□□□ -0.65
TNFRSF1A-211ENST00000538363 CREG2Q8IUH2 290 aa11.02□□□□□ -0.65
TNFRSF1A-211ENST00000538363 CCDC105Q8IYK2 499 aa11.02□□□□□ -0.65
TNFRSF1A-211ENST00000538363 LGI2Q8N0V4 545 aa11.02□□□□□ -0.65
TNFRSF1A-211ENST00000538363 CCDC26Q8TAB7 109 aa11.02□□□□□ -0.65
TNFRSF1A-211ENST00000538363 P3H4Q92791 437 aa11.02□□□□□ -0.65
TNFRSF1A-211ENST00000538363 MAGOHBQ96A72 148 aaKnown RBP11.02□□□□□ -0.65
TNFRSF1A-211ENST00000538363 TCEAL4Q96EI5 215 aa11.02□□□□□ -0.65
TNFRSF1A-211ENST00000538363 CCDC114Q96M63 670 aa11.02□□□□□ -0.65
TNFRSF1A-211ENST00000538363 RPRD1AQ96P16 312 aaPredicted RBP11.02□□□□□ -0.65
TNFRSF1A-211ENST00000538363 ZNF670Q9BS34 389 aa11.02□□□□□ -0.65
TNFRSF1A-211ENST00000538363 KLF16Q9BXK1 252 aaPredicted RBP11.02□□□□□ -0.65
TNFRSF1A-211ENST00000538363 TTYH1Q9H313 450 aaPredicted RBP11.02□□□□□ -0.65
TNFRSF1A-211ENST00000538363 PRDM16Q9HAZ2 1276 aa11.02□□□□□ -0.65
TNFRSF1A-211ENST00000538363 WDR6Q9NNW5 1121 aaKnown RBP11.02□□□□□ -0.65
TNFRSF1A-211ENST00000538363 TMPRSS4Q9NRS4 437 aa11.02□□□□□ -0.65
TNFRSF1A-211ENST00000538363 ARHGEF38Q9NXL2 777 aa11.02□□□□□ -0.65
TNFRSF1A-211ENST00000538363 SMARCAL1Q9NZC9 954 aa11.02□□□□□ -0.65
TNFRSF1A-211ENST00000538363 FEZ2Q9UHY8 353 aaPredicted RBP11.02□□□□□ -0.65
TNFRSF1A-211ENST00000538363 HEY1Q9Y5J3 304 aa11.02□□□□□ -0.65
TNFRSF1A-211ENST00000538363 MTCH2Q9Y6C9 303 aa11.02□□□□□ -0.65
TNFRSF1A-211ENST00000538363 LAMA3Q16787 3333 aa11.01□□□□□ -0.65
TNFRSF1A-211ENST00000538363 hCG_1818297A0A087WSY0 165 aa11.01□□□□□ -0.65
TNFRSF1A-211ENST00000538363 C2orf72A6NCS6 295 aa11.01□□□□□ -0.65
TNFRSF1A-211ENST00000538363 TSPAN3O60637 253 aa11.01□□□□□ -0.65
TNFRSF1A-211ENST00000538363 NEBLO76041 1014 aa11.01□□□□□ -0.65
TNFRSF1A-211ENST00000538363 STC2O76061 302 aa11.01□□□□□ -0.65
TNFRSF1A-211ENST00000538363 IGLV3-25P01717 112 aa11.01□□□□□ -0.65
TNFRSF1A-211ENST00000538363 CD48P09326 243 aa11.01□□□□□ -0.65
TNFRSF1A-211ENST00000538363 GOT1P17174 413 aa11.01□□□□□ -0.65
TNFRSF1A-211ENST00000538363 AMPD1P23109 780 aa11.01□□□□□ -0.65
TNFRSF1A-211ENST00000538363 HTR7P34969 479 aa11.01□□□□□ -0.65
TNFRSF1A-211ENST00000538363 ACTN2P35609 894 aa11.01□□□□□ -0.65
TNFRSF1A-211ENST00000538363 CDKN2BP42772 138 aa11.01□□□□□ -0.65
TNFRSF1A-211ENST00000538363 KCNQ1P51787 676 aa11.01□□□□□ -0.65
TNFRSF1A-211ENST00000538363 LMNB2Q03252 620 aa11.01□□□□□ -0.65
TNFRSF1A-211ENST00000538363 SCAPQ12770 1279 aa11.01□□□□□ -0.65
TNFRSF1A-211ENST00000538363 DPYSL3Q14195 570 aa11.01□□□□□ -0.65
TNFRSF1A-211ENST00000538363 CBX2Q14781 532 aaPredicted RBP11.01□□□□□ -0.65
TNFRSF1A-211ENST00000538363 DPYSL2Q16555 572 aa11.01□□□□□ -0.65
TNFRSF1A-211ENST00000538363 TEX35Q5T0J7 233 aa11.01□□□□□ -0.65
TNFRSF1A-211ENST00000538363 DCAF12L1Q5VU92 463 aa11.01□□□□□ -0.65
TNFRSF1A-211ENST00000538363 OTUD1Q5VV17 481 aaPredicted RBP11.01□□□□□ -0.65
TNFRSF1A-211ENST00000538363 DARS2Q6PI48 645 aaKnown RBP11.01□□□□□ -0.65
TNFRSF1A-211ENST00000538363 RFX8Q6ZV50 586 aa11.01□□□□□ -0.65
TNFRSF1A-211ENST00000538363 Q7L0L9 218 aa11.01□□□□□ -0.65
TNFRSF1A-211ENST00000538363 YAF2Q8IY57 180 aa11.01□□□□□ -0.65
TNFRSF1A-211ENST00000538363 CMTM8Q8IZV2 173 aa11.01□□□□□ -0.65
TNFRSF1A-211ENST00000538363 RASGEF1CQ8N431 466 aa11.01□□□□□ -0.65
TNFRSF1A-211ENST00000538363 UBXN4Q92575 508 aa11.01□□□□□ -0.65
TNFRSF1A-211ENST00000538363 ZNF707Q96C28 371 aaPredicted RBP11.01□□□□□ -0.65
TNFRSF1A-211ENST00000538363 HAUS1Q96CS2 278 aa11.01□□□□□ -0.65
TNFRSF1A-211ENST00000538363 RUNDC3BQ96NL0 473 aa11.01□□□□□ -0.65
TNFRSF1A-211ENST00000538363 RNF157Q96PX1 679 aa11.01□□□□□ -0.65
TNFRSF1A-211ENST00000538363 SLC46A2Q9BY10 475 aa11.01□□□□□ -0.65
TNFRSF1A-211ENST00000538363 LRRC3Q9BY71 257 aa11.01□□□□□ -0.65
TNFRSF1A-211ENST00000538363 TDP1Q9NUW8 608 aa11.01□□□□□ -0.65
TNFRSF1A-211ENST00000538363 THG1LQ9NWX6 298 aaKnown RBP11.01□□□□□ -0.65
TNFRSF1A-211ENST00000538363 CWC15Q9P013 229 aaKnown RBP11.01□□□□□ -0.65
TNFRSF1A-211ENST00000538363 CALCOCO1Q9P1Z2 691 aa11.01□□□□□ -0.65
TNFRSF1A-211ENST00000538363 RCOR3Q9P2K3 495 aaPredicted RBP11.01□□□□□ -0.65
TNFRSF1A-211ENST00000538363 VANGL2Q9ULK5 521 aa11.01□□□□□ -0.65
TNFRSF1A-211ENST00000538363 ZNF148Q9UQR1 794 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms