RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-208ENST00000538021 HLA-FP30511 346 aa11.66□□□□□ -0.54
CLPB-208ENST00000538021 PSEN1P49768 467 aa11.66□□□□□ -0.54
CLPB-208ENST00000538021 NDST1P52848 882 aa11.66□□□□□ -0.54
CLPB-208ENST00000538021 GALCP54803 685 aa11.66□□□□□ -0.54
CLPB-208ENST00000538021 VAC14Q08AM6 782 aa11.66□□□□□ -0.54
CLPB-208ENST00000538021 ZNF776Q68DI1 518 aaPredicted RBP11.66□□□□□ -0.54
CLPB-208ENST00000538021 NCEH1Q6PIU2 408 aa11.66□□□□□ -0.54
CLPB-208ENST00000538021 CLEC20AQ6ZU45 233 aa11.66□□□□□ -0.54
CLPB-208ENST00000538021 SCD5Q86SK9 330 aa11.66□□□□□ -0.54
CLPB-208ENST00000538021 HIC2Q96JB3 615 aa11.66□□□□□ -0.54
CLPB-208ENST00000538021 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.66□□□□□ -0.54
CLPB-208ENST00000538021 TRIM4Q9C037 500 aa11.66□□□□□ -0.54
CLPB-208ENST00000538021 HMGXB4Q9UGU5 601 aa11.66□□□□□ -0.54
CLPB-208ENST00000538021 BSNQ9UPA5 3926 aa11.65□□□□□ -0.54
CLPB-208ENST00000538021 A0A1W2PP55 124 aa11.65□□□□□ -0.54
CLPB-208ENST00000538021 SLC12A8A0AV02 714 aa11.65□□□□□ -0.54
CLPB-208ENST00000538021 LRRC72A6NJI9 287 aa11.65□□□□□ -0.54
CLPB-208ENST00000538021 HHLA1C9JL84 531 aa11.65□□□□□ -0.54
CLPB-208ENST00000538021 ACP1P24666 158 aa11.65□□□□□ -0.54
CLPB-208ENST00000538021 GJB2P29033 226 aa11.65□□□□□ -0.54
CLPB-208ENST00000538021 HOXD13P35453 343 aa11.65□□□□□ -0.54
CLPB-208ENST00000538021 STAT6P42226 847 aa11.65□□□□□ -0.54
CLPB-208ENST00000538021 CASP4P49662 377 aa11.65□□□□□ -0.54
CLPB-208ENST00000538021 GABREP78334 506 aa11.65□□□□□ -0.54
CLPB-208ENST00000538021 E2F1Q01094 437 aa11.65□□□□□ -0.54
CLPB-208ENST00000538021 NCOA4Q13772 614 aa11.65□□□□□ -0.54
CLPB-208ENST00000538021 BMT2Q1RMZ1 405 aa11.65□□□□□ -0.54
CLPB-208ENST00000538021 MPPE1Q53F39 396 aa11.65□□□□□ -0.54
CLPB-208ENST00000538021 SLC45A4Q5BKX6 768 aa11.65□□□□□ -0.54
CLPB-208ENST00000538021 KIAA1614Q5VZ46 1190 aa11.65□□□□□ -0.54
CLPB-208ENST00000538021 CCDC73Q6ZRK6 1079 aa11.65□□□□□ -0.54
CLPB-208ENST00000538021 USP30Q70CQ3 517 aa11.65□□□□□ -0.54
CLPB-208ENST00000538021 RSRC2Q7L4I2 434 aaKnown RBP11.65□□□□□ -0.54
CLPB-208ENST00000538021 LSMEM2Q8N112 164 aa11.65□□□□□ -0.54
CLPB-208ENST00000538021 CRYBG2Q8N1P7 616 aa11.65□□□□□ -0.54
CLPB-208ENST00000538021 CPXM2Q8N436 756 aa11.65□□□□□ -0.54
CLPB-208ENST00000538021 XXYLT1Q8NBI6 393 aa11.65□□□□□ -0.54
CLPB-208ENST00000538021 WFIKKN2Q8TEU8 576 aa11.65□□□□□ -0.54
CLPB-208ENST00000538021 SERAC1Q96JX3 654 aa11.65□□□□□ -0.54
CLPB-208ENST00000538021 CDK5RAP1Q96SZ6 601 aaKnown RBP11.65□□□□□ -0.54
CLPB-208ENST00000538021 FAM117AQ9C073 453 aa11.65□□□□□ -0.54
CLPB-208ENST00000538021 PABPC3Q9H361 631 aaKnown RBP11.65□□□□□ -0.54
CLPB-208ENST00000538021 MTG2Q9H4K7 406 aa11.65□□□□□ -0.54
CLPB-208ENST00000538021 VRTNQ9H8Y1 702 aa11.65□□□□□ -0.54
CLPB-208ENST00000538021 AGPAT3Q9NRZ7 376 aa11.65□□□□□ -0.54
CLPB-208ENST00000538021 ABCB8Q9NUT2 735 aa11.65□□□□□ -0.54
CLPB-208ENST00000538021 SUN2Q9UH99 717 aa11.65□□□□□ -0.54
CLPB-208ENST00000538021 IL17BQ9UHF5 180 aa11.65□□□□□ -0.54
CLPB-208ENST00000538021 STRIP2Q9ULQ0 834 aa11.65□□□□□ -0.54
CLPB-208ENST00000538021 HEMK1Q9Y5R4 338 aaPredicted RBP11.65□□□□□ -0.54
CLPB-208ENST00000538021 BOD1L1Q8NFC6 3051 aa11.64□□□□□ -0.55
CLPB-208ENST00000538021 A0A1W2PR77 199 aa11.64□□□□□ -0.55
CLPB-208ENST00000538021 TLR4O00206 839 aa11.64□□□□□ -0.55
CLPB-208ENST00000538021 EIF5BO60841 1220 aaKnown RBP11.64□□□□□ -0.55
CLPB-208ENST00000538021 SDC3O75056 442 aa11.64□□□□□ -0.55
CLPB-208ENST00000538021 RNASEH2AO75792 299 aaKnown RBP11.64□□□□□ -0.55
CLPB-208ENST00000538021 ATP5BP06576 529 aaKnown RBP11.64□□□□□ -0.55
CLPB-208ENST00000538021 C7P10643 843 aa11.64□□□□□ -0.55
CLPB-208ENST00000538021 P4HA1P13674 534 aa11.64□□□□□ -0.55
CLPB-208ENST00000538021 TRIM21P19474 475 aaKnown RBP11.64□□□□□ -0.55
CLPB-208ENST00000538021 HOXD9P28356 352 aaPredicted RBP11.64□□□□□ -0.55
CLPB-208ENST00000538021 KIF11P52732 1056 aa11.64□□□□□ -0.55
CLPB-208ENST00000538021 NXPH1P58417 271 aa11.64□□□□□ -0.55
CLPB-208ENST00000538021 DAB2P98082 770 aa11.64□□□□□ -0.55
CLPB-208ENST00000538021 SFSWAPQ12872 951 aaKnown RBP11.64□□□□□ -0.55
CLPB-208ENST00000538021 NFATC3Q12968 1075 aa11.64□□□□□ -0.55
CLPB-208ENST00000538021 KCNJ12Q14500 433 aa11.64□□□□□ -0.55
CLPB-208ENST00000538021 COLEC12Q5KU26 742 aa11.64□□□□□ -0.55
CLPB-208ENST00000538021 SFMBT2Q5VUG0 894 aa11.64□□□□□ -0.55
CLPB-208ENST00000538021 MBLAC2Q68D91 279 aa11.64□□□□□ -0.55
CLPB-208ENST00000538021 CCDC186Q7Z3E2 898 aa11.64□□□□□ -0.55
CLPB-208ENST00000538021 ADIPOR2Q86V24 386 aa11.64□□□□□ -0.55
CLPB-208ENST00000538021 AHI1Q8N157 1196 aa11.64□□□□□ -0.55
CLPB-208ENST00000538021 OXR1Q8N573 874 aa11.64□□□□□ -0.55
CLPB-208ENST00000538021 CYFIP2Q96F07 1278 aa11.64□□□□□ -0.55
CLPB-208ENST00000538021 CLIC6Q96NY7 704 aa11.64□□□□□ -0.55
CLPB-208ENST00000538021 OMDQ99983 421 aa11.64□□□□□ -0.55
CLPB-208ENST00000538021 GZF1Q9H116 711 aaPredicted RBP11.64□□□□□ -0.55
CLPB-208ENST00000538021 NEUROG2Q9H2A3 272 aa11.64□□□□□ -0.55
CLPB-208ENST00000538021 CLIC5Q9NZA1 410 aa11.64□□□□□ -0.55
CLPB-208ENST00000538021 MARCH2Q9P0N8 246 aa11.64□□□□□ -0.55
CLPB-208ENST00000538021 SERGEFQ9UGK8 458 aa11.64□□□□□ -0.55
CLPB-208ENST00000538021 GGA2Q9UJY4 613 aa11.64□□□□□ -0.55
CLPB-208ENST00000538021 SCML1Q9UN30 329 aa11.64□□□□□ -0.55
CLPB-208ENST00000538021 MID1O15344 667 aa11.63□□□□□ -0.55
CLPB-208ENST00000538021 TGFB1I1O43294 461 aa11.63□□□□□ -0.55
CLPB-208ENST00000538021 SIGLEC6O43699 453 aa11.63□□□□□ -0.55
CLPB-208ENST00000538021 STX6O43752 255 aa11.63□□□□□ -0.55
CLPB-208ENST00000538021 RNASEH1O60930 286 aaKnown RBP11.63□□□□□ -0.55
CLPB-208ENST00000538021 USP12O75317 370 aa11.63□□□□□ -0.55
CLPB-208ENST00000538021 DLDP09622 509 aaKnown RBP11.63□□□□□ -0.55
CLPB-208ENST00000538021 PABPC1P11940 636 aaKnown RBP11.63□□□□□ -0.55
CLPB-208ENST00000538021 POLR2EP19388 210 aaKnown RBP11.63□□□□□ -0.55
CLPB-208ENST00000538021 RXRGP48443 463 aa11.63□□□□□ -0.55
CLPB-208ENST00000538021 ERVPABLB-1P60509 514 aa11.63□□□□□ -0.55
CLPB-208ENST00000538021 PROX2Q3B8N5 592 aa11.63□□□□□ -0.55
CLPB-208ENST00000538021 C6orf132Q5T0Z8 1188 aa11.63□□□□□ -0.55
CLPB-208ENST00000538021 UNC93AQ86WB7 457 aa11.63□□□□□ -0.55
CLPB-208ENST00000538021 NELFCDQ8IXH7 590 aa11.63□□□□□ -0.55
CLPB-208ENST00000538021 ZC3H3Q8IXZ2 948 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms