RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 NADSYN1Q6IA69 706 aa25.11■■□□□ 1.61
HMGA2-208ENST00000537429 MFSD6LQ8IWD5 586 aa25.11■■□□□ 1.61
HMGA2-208ENST00000537429 BBS7Q8IWZ6 715 aa25.11■■□□□ 1.61
HMGA2-208ENST00000537429 ZDHHC14Q8IZN3 488 aa25.11■■□□□ 1.61
HMGA2-208ENST00000537429 KRT35Q92764 455 aa25.11■■□□□ 1.61
HMGA2-208ENST00000537429 HES6Q96HZ4 224 aa25.11■■□□□ 1.61
HMGA2-208ENST00000537429 PLA2G2FQ9BZM2 168 aa25.11■■□□□ 1.61
HMGA2-208ENST00000537429 GPATCH2LQ9NWQ4 482 aa25.11■■□□□ 1.61
HMGA2-208ENST00000537429 PACSIN2Q9UNF0 486 aaPredicted RBP25.11■■□□□ 1.61
HMGA2-208ENST00000537429 HS3ST4Q9Y661 456 aa25.11■■□□□ 1.61
HMGA2-208ENST00000537429 CCDC66A2RUB6 948 aa25.1■■□□□ 1.61
HMGA2-208ENST00000537429 TNNT1P13805 278 aa25.1■■□□□ 1.61
HMGA2-208ENST00000537429 MSNP26038 577 aaKnown RBP25.1■■□□□ 1.61
HMGA2-208ENST00000537429 GJC1P36383 396 aa25.1■■□□□ 1.61
HMGA2-208ENST00000537429 GNG11P61952 73 aa25.1■■□□□ 1.61
HMGA2-208ENST00000537429 HTR4Q13639 388 aa25.1■■□□□ 1.61
HMGA2-208ENST00000537429 CA9Q16790 459 aa25.1■■□□□ 1.61
HMGA2-208ENST00000537429 FAM133BQ5BKY9 247 aaKnown RBP25.1■■□□□ 1.61
HMGA2-208ENST00000537429 ADGRF1Q5T601 910 aa25.1■■□□□ 1.61
HMGA2-208ENST00000537429 ACBD5Q5T8D3 534 aaPredicted RBP25.1■■□□□ 1.61
HMGA2-208ENST00000537429 FAM217AQ8IXS0 508 aa25.1■■□□□ 1.61
HMGA2-208ENST00000537429 PRMT1Q99873 361 aaKnown RBP25.1■■□□□ 1.61
HMGA2-208ENST00000537429 KXD1Q9BQD3 176 aa25.1■■□□□ 1.61
HMGA2-208ENST00000537429 SIK2Q9H0K1 926 aa25.1■■□□□ 1.61
HMGA2-208ENST00000537429 TBC1D14Q9P2M4 693 aa25.1■■□□□ 1.61
HMGA2-208ENST00000537429 MIF4GDA9UHW6 222 aaKnown RBP25.09■■□□□ 1.61
HMGA2-208ENST00000537429 MARCKSL1P49006 195 aa25.09■■□□□ 1.61
HMGA2-208ENST00000537429 PEX5P50542 639 aa25.09■■□□□ 1.61
HMGA2-208ENST00000537429 FCHO2Q0JRZ9 810 aa25.09■■□□□ 1.61
HMGA2-208ENST00000537429 DPYSL2Q16555 572 aa25.09■■□□□ 1.61
HMGA2-208ENST00000537429 PYROXD2Q8N2H3 581 aa25.09■■□□□ 1.61
HMGA2-208ENST00000537429 ATXN2LQ8WWM7 1075 aaKnown RBP25.09■■□□□ 1.61
HMGA2-208ENST00000537429 HSPH1Q92598 858 aa25.09■■□□□ 1.61
HMGA2-208ENST00000537429 RPP25Q9BUL9 199 aaKnown RBP25.09■■□□□ 1.61
HMGA2-208ENST00000537429 DHX35Q9H5Z1 703 aaKnown RBP25.09■■□□□ 1.61
HMGA2-208ENST00000537429 STAU2Q9NUL3 570 aaKnown RBP eCLIP25.09■■□□□ 1.61
HMGA2-208ENST00000537429 OR12D3Q9UGF7 316 aa25.09■■□□□ 1.61
HMGA2-208ENST00000537429 SBDSQ9Y3A5 250 aaKnown RBP eCLIP25.09■■□□□ 1.61
HMGA2-208ENST00000537429 JRKLQ9Y4A0 524 aa25.09■■□□□ 1.61
HMGA2-208ENST00000537429 SNX10Q9Y5X0 201 aa25.09■■□□□ 1.61
HMGA2-208ENST00000537429 NUMBLQ9Y6R0 609 aa25.09■■□□□ 1.61
HMGA2-208ENST00000537429 GOLGA6L7A0A1B0GV03 622 aa25.08■■□□□ 1.61
HMGA2-208ENST00000537429 NRG1Q02297 640 aaPredicted RBP25.08■■□□□ 1.61
HMGA2-208ENST00000537429 RAP1GAP2Q684P5 730 aa25.08■■□□□ 1.61
HMGA2-208ENST00000537429 NYAP1Q6ZVC0 841 aa25.08■■□□□ 1.61
HMGA2-208ENST00000537429 DEPDC1BQ8WUY9 529 aa25.08■■□□□ 1.61
HMGA2-208ENST00000537429 DDX56Q9NY93 547 aaKnown RBP25.08■■□□□ 1.61
HMGA2-208ENST00000537429 LIMD1Q9UGP4 676 aa25.08■■□□□ 1.61
HMGA2-208ENST00000537429 FAM72CH0Y354 149 aa25.07■■□□□ 1.6
HMGA2-208ENST00000537429 SLC9A3R1O14745 358 aaPredicted RBP25.07■■□□□ 1.6
HMGA2-208ENST00000537429 DDX3YO15523 660 aaKnown RBP25.07■■□□□ 1.6
HMGA2-208ENST00000537429 PSMC3P17980 439 aa25.07■■□□□ 1.6
HMGA2-208ENST00000537429 SLC6A4P31645 630 aa25.07■■□□□ 1.6
HMGA2-208ENST00000537429 L1CAMP32004 1257 aa25.07■■□□□ 1.6
HMGA2-208ENST00000537429 GGCXP38435 758 aa25.07■■□□□ 1.6
HMGA2-208ENST00000537429 ARSEP51690 589 aa25.07■■□□□ 1.6
HMGA2-208ENST00000537429 SEMA3BQ13214 749 aa25.07■■□□□ 1.6
HMGA2-208ENST00000537429 AUHQ13825 339 aaKnown RBP25.07■■□□□ 1.6
HMGA2-208ENST00000537429 ARTNQ5T4W7 220 aa25.07■■□□□ 1.6
HMGA2-208ENST00000537429 FAM72AQ5TYM5 149 aa25.07■■□□□ 1.6
HMGA2-208ENST00000537429 FAM72DQ6L9T8 149 aa25.07■■□□□ 1.6
HMGA2-208ENST00000537429 FAM72BQ86X60 149 aa25.07■■□□□ 1.6
HMGA2-208ENST00000537429 ZNF683Q8IZ20 524 aa25.07■■□□□ 1.6
HMGA2-208ENST00000537429 CPXM2Q8N436 756 aa25.07■■□□□ 1.6
HMGA2-208ENST00000537429 FAM71BQ8TC56 605 aa25.07■■□□□ 1.6
HMGA2-208ENST00000537429 OSCP1Q8WVF1 389 aa25.07■■□□□ 1.6
HMGA2-208ENST00000537429 OTUB2Q96DC9 234 aa25.07■■□□□ 1.6
HMGA2-208ENST00000537429 DDX50Q9BQ39 737 aaKnown RBP25.07■■□□□ 1.6
HMGA2-208ENST00000537429 TLR10Q9BXR5 811 aa25.07■■□□□ 1.6
HMGA2-208ENST00000537429 LINC00597Q9H2U6 94 aa25.07■■□□□ 1.6
HMGA2-208ENST00000537429 THG1LQ9NWX6 298 aaKnown RBP25.07■■□□□ 1.6
HMGA2-208ENST00000537429 WNT6Q9Y6F9 365 aa25.07■■□□□ 1.6
HMGA2-208ENST00000537429 KIF26AQ9ULI4 1882 aaPredicted RBP25.07■■□□□ 1.6
HMGA2-208ENST00000537429 LOC730098B7Z3J9 87 aa25.07■■□□□ 1.6
HMGA2-208ENST00000537429 GFRA2O00451 464 aa25.07■■□□□ 1.6
HMGA2-208ENST00000537429 TACR2P21452 398 aa25.07■■□□□ 1.6
HMGA2-208ENST00000537429 CHKAP35790 457 aa25.07■■□□□ 1.6
HMGA2-208ENST00000537429 C14orf80Q86SX3 495 aa25.07■■□□□ 1.6
HMGA2-208ENST00000537429 CHSY1Q86X52 802 aa25.07■■□□□ 1.6
HMGA2-208ENST00000537429 YAF2Q8IY57 180 aa25.07■■□□□ 1.6
HMGA2-208ENST00000537429 KATNAL2Q8IYT4 538 aa25.07■■□□□ 1.6
HMGA2-208ENST00000537429 UBL4BQ8N7F7 174 aa25.07■■□□□ 1.6
HMGA2-208ENST00000537429 NXPE3Q969Y0 559 aa25.07■■□□□ 1.6
HMGA2-208ENST00000537429 WDR24Q96S15 920 aa25.07■■□□□ 1.6
HMGA2-208ENST00000537429 KCTD15Q96SI1 283 aaPredicted RBP25.07■■□□□ 1.6
HMGA2-208ENST00000537429 KLHL11Q9NVR0 708 aa25.07■■□□□ 1.6
HMGA2-208ENST00000537429 ETF1P62495 437 aaKnown RBP25.06■■□□□ 1.6
HMGA2-208ENST00000537429 RPS6KA1Q15418 735 aa25.06■■□□□ 1.6
HMGA2-208ENST00000537429 ZFYVE27Q5T4F4 411 aa25.06■■□□□ 1.6
HMGA2-208ENST00000537429 MANEALQ5VSG8 457 aa25.06■■□□□ 1.6
HMGA2-208ENST00000537429 RFWD3Q6PCD5 774 aa25.06■■□□□ 1.6
HMGA2-208ENST00000537429 ADGRG2Q8IZP9 1017 aa25.06■■□□□ 1.6
HMGA2-208ENST00000537429 RSAD2Q8WXG1 361 aa25.06■■□□□ 1.6
HMGA2-208ENST00000537429 RAPGEF5Q92565 580 aa25.06■■□□□ 1.6
HMGA2-208ENST00000537429 ALG3Q92685 438 aa25.06■■□□□ 1.6
HMGA2-208ENST00000537429 ASIC4Q96FT7 647 aa25.06■■□□□ 1.6
HMGA2-208ENST00000537429 FAM83CQ9BQN1 747 aa25.06■■□□□ 1.6
HMGA2-208ENST00000537429 PCDH18Q9HCL0 1135 aa25.06■■□□□ 1.6
HMGA2-208ENST00000537429 DUS2Q9NX74 493 aaKnown RBP25.06■■□□□ 1.6
HMGA2-208ENST00000537429 PRKAG3Q9UGI9 489 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms