RNA–Protein interactions for RNA: ENST00000537335.5

POLR1B-216, Transcript of RNA polymerase I subunit B, humanhuman

TSL 2 BASIC

Gene POLR1B, Length 4,961 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-216ENST00000537335 PDGFRBP09619 1106 aa12.08□□□□□ -0.48
POLR1B-216ENST00000537335 C6orf222P0C671 652 aaPredicted RBP12.08□□□□□ -0.48
POLR1B-216ENST00000537335 GZMAP12544 262 aa12.08□□□□□ -0.48
POLR1B-216ENST00000537335 SSTR1P30872 391 aa12.08□□□□□ -0.48
POLR1B-216ENST00000537335 GRIK1P39086 918 aa12.08□□□□□ -0.48
POLR1B-216ENST00000537335 AP3M2P53677 418 aa12.08□□□□□ -0.48
POLR1B-216ENST00000537335 OR2B6P58173 313 aa12.08□□□□□ -0.48
POLR1B-216ENST00000537335 CSNK2BP67870 215 aa12.08□□□□□ -0.48
POLR1B-216ENST00000537335 ECT2LQ008S8 904 aa12.08□□□□□ -0.48
POLR1B-216ENST00000537335 ILF2Q12905 390 aaKnown RBP12.08□□□□□ -0.48
POLR1B-216ENST00000537335 TRIM32Q13049 653 aa12.08□□□□□ -0.48
POLR1B-216ENST00000537335 FAM131AQ6UXB0 335 aa12.08□□□□□ -0.48
POLR1B-216ENST00000537335 USP17L1Q7RTZ2 530 aa12.08□□□□□ -0.48
POLR1B-216ENST00000537335 TMCO6Q96DC7 493 aa12.08□□□□□ -0.48
POLR1B-216ENST00000537335 RBM17Q96I25 401 aaKnown RBP12.08□□□□□ -0.48
POLR1B-216ENST00000537335 MAGEB16A2A368 324 aa12.08□□□□□ -0.48
POLR1B-216ENST00000537335 TEX28O15482 410 aa12.08□□□□□ -0.48
POLR1B-216ENST00000537335 TDP2O95551 362 aa12.08□□□□□ -0.48
POLR1B-216ENST00000537335 EYA4O95677 639 aa12.08□□□□□ -0.48
POLR1B-216ENST00000537335 RBP1P09455 135 aa12.08□□□□□ -0.48
POLR1B-216ENST00000537335 HIST1H2AGP0C0S8 130 aaPredicted RBP12.08□□□□□ -0.48
POLR1B-216ENST00000537335 HIST1H2ADP20671 130 aa12.08□□□□□ -0.48
POLR1B-216ENST00000537335 HALP42357 657 aa12.08□□□□□ -0.48
POLR1B-216ENST00000537335 CDC16Q13042 620 aa12.08□□□□□ -0.48
POLR1B-216ENST00000537335 SHROOM1Q2M3G4 852 aaPredicted RBP12.08□□□□□ -0.48
POLR1B-216ENST00000537335 GALNTL6Q49A17 601 aa12.08□□□□□ -0.48
POLR1B-216ENST00000537335 SGO1Q5FBB7 561 aa12.08□□□□□ -0.48
POLR1B-216ENST00000537335 TFDP3Q5H9I0 405 aa12.08□□□□□ -0.48
POLR1B-216ENST00000537335 IQSEC1Q6DN90 963 aa12.08□□□□□ -0.48
POLR1B-216ENST00000537335 NAPEPLDQ6IQ20 393 aa12.08□□□□□ -0.48
POLR1B-216ENST00000537335 PPP1R18Q6NYC8 613 aa12.08□□□□□ -0.48
POLR1B-216ENST00000537335 CYP4Z2PQ8N1L4 340 aa12.08□□□□□ -0.48
POLR1B-216ENST00000537335 PHC3Q8NDX5 983 aa12.08□□□□□ -0.48
POLR1B-216ENST00000537335 EXD1Q8NHP7 514 aa12.08□□□□□ -0.48
POLR1B-216ENST00000537335 RP9Q8TA86 221 aaKnown RBP12.08□□□□□ -0.48
POLR1B-216ENST00000537335 SLC5A5Q92911 643 aa12.08□□□□□ -0.48
POLR1B-216ENST00000537335 HIST1H2AHQ96KK5 128 aa12.08□□□□□ -0.48
POLR1B-216ENST00000537335 HIST1H2AJQ99878 128 aa12.08□□□□□ -0.48
POLR1B-216ENST00000537335 H2AFJQ9BTM1 129 aa12.08□□□□□ -0.48
POLR1B-216ENST00000537335 MAGEE1Q9HCI5 957 aa12.08□□□□□ -0.48
POLR1B-216ENST00000537335 SEC31BQ9NQW1 1179 aa12.08□□□□□ -0.48
POLR1B-216ENST00000537335 KLHL1Q9NR64 748 aa12.08□□□□□ -0.48
POLR1B-216ENST00000537335 FKBP14Q9NWM8 211 aa12.08□□□□□ -0.48
POLR1B-216ENST00000537335 PKP3Q9Y446 797 aa12.08□□□□□ -0.48
POLR1B-216ENST00000537335 GMPPBQ9Y5P6 360 aa12.08□□□□□ -0.48
POLR1B-216ENST00000537335 RAD54BQ9Y620 910 aa12.08□□□□□ -0.48
POLR1B-216ENST00000537335 FBP2O00757 339 aa12.08□□□□□ -0.48
POLR1B-216ENST00000537335 MDM4O15151 490 aa12.08□□□□□ -0.48
POLR1B-216ENST00000537335 EIF4BP23588 611 aaKnown RBP12.08□□□□□ -0.48
POLR1B-216ENST00000537335 HSD17B4P51659 736 aa12.08□□□□□ -0.48
POLR1B-216ENST00000537335 FAAP100Q0VG06 881 aa12.08□□□□□ -0.48
POLR1B-216ENST00000537335 BST2Q10589 180 aaKnown RBP12.08□□□□□ -0.48
POLR1B-216ENST00000537335 PGS1Q32NB8 556 aa12.08□□□□□ -0.48
POLR1B-216ENST00000537335 ZNF829Q3KNS6 432 aaPredicted RBP12.08□□□□□ -0.48
POLR1B-216ENST00000537335 RASAL3Q86YV0 1011 aa12.08□□□□□ -0.48
POLR1B-216ENST00000537335 GREM2Q9H772 168 aa12.08□□□□□ -0.48
POLR1B-216ENST00000537335 CYP4F12Q9HCS2 524 aa12.08□□□□□ -0.48
POLR1B-216ENST00000537335 GIT1Q9Y2X7 761 aa12.08□□□□□ -0.48
POLR1B-216ENST00000537335 WDR62O43379 1518 aa12.07□□□□□ -0.48
POLR1B-216ENST00000537335 FAM220BPB1ANY3 271 aa12.07□□□□□ -0.48
POLR1B-216ENST00000537335 UBAP1LF5GYI3 381 aa12.07□□□□□ -0.48
POLR1B-216ENST00000537335 IFNA7P01567 189 aa12.07□□□□□ -0.48
POLR1B-216ENST00000537335 GCP02774 474 aa12.07□□□□□ -0.48
POLR1B-216ENST00000537335 THRBP10828 461 aa12.07□□□□□ -0.48
POLR1B-216ENST00000537335 TCF4P15884 667 aa12.07□□□□□ -0.48
POLR1B-216ENST00000537335 GJB7Q6PEY0 223 aa12.07□□□□□ -0.48
POLR1B-216ENST00000537335 HAUS6Q7Z4H7 955 aa12.07□□□□□ -0.48
POLR1B-216ENST00000537335 IQCF2Q8IXL9 164 aa12.07□□□□□ -0.48
POLR1B-216ENST00000537335 ANKRD13AQ8IZ07 590 aa12.07□□□□□ -0.48
POLR1B-216ENST00000537335 MRPL48Q96GC5 212 aaKnown RBP12.07□□□□□ -0.48
POLR1B-216ENST00000537335 XKR8Q9H6D3 395 aa12.07□□□□□ -0.48
POLR1B-216ENST00000537335 TAS2R1Q9NYW7 299 aa12.07□□□□□ -0.48
POLR1B-216ENST00000537335 ISPDA4D126 451 aa12.07□□□□□ -0.48
POLR1B-216ENST00000537335 E7ENX8 843 aa12.07□□□□□ -0.48
POLR1B-216ENST00000537335 ECE2O60344 883 aa12.07□□□□□ -0.48
POLR1B-216ENST00000537335 CNPP09543 421 aaKnown RBP12.07□□□□□ -0.48
POLR1B-216ENST00000537335 PON1P27169 355 aa12.07□□□□□ -0.48
POLR1B-216ENST00000537335 RXRGP48443 463 aa12.07□□□□□ -0.48
POLR1B-216ENST00000537335 PROSER3Q2NL68 480 aa12.07□□□□□ -0.48
POLR1B-216ENST00000537335 SMTNL2Q2TAL5 461 aa12.07□□□□□ -0.48
POLR1B-216ENST00000537335 RFX4Q33E94 735 aa12.07□□□□□ -0.48
POLR1B-216ENST00000537335 PMF1Q6P1K2 205 aa12.07□□□□□ -0.48
POLR1B-216ENST00000537335 CYP4Z1Q86W10 505 aa12.07□□□□□ -0.48
POLR1B-216ENST00000537335 TRPV1Q8NER1 839 aa12.07□□□□□ -0.48
POLR1B-216ENST00000537335 ACTRT2Q8TDY3 377 aa12.07□□□□□ -0.48
POLR1B-216ENST00000537335 KBTBD7Q8WVZ9 684 aa12.07□□□□□ -0.48
POLR1B-216ENST00000537335 CCDC115Q96NT0 180 aa12.07□□□□□ -0.48
POLR1B-216ENST00000537335 PPP1R2P1Q96PQ5 205 aa12.07□□□□□ -0.48
POLR1B-216ENST00000537335 SYT15Q9BQS2 421 aa12.07□□□□□ -0.48
POLR1B-216ENST00000537335 KCTD10Q9H3F6 313 aa12.07□□□□□ -0.48
POLR1B-216ENST00000537335 SPAG4Q9NPE6 437 aa12.07□□□□□ -0.48
POLR1B-216ENST00000537335 CFAP74Q9C0B2 1584 aa12.07□□□□□ -0.48
POLR1B-216ENST00000537335 MT-CO1P00395 513 aa12.07□□□□□ -0.48
POLR1B-216ENST00000537335 ZNF37AP17032 561 aaPredicted RBP12.07□□□□□ -0.48
POLR1B-216ENST00000537335 RCVRNP35243 200 aa12.07□□□□□ -0.48
POLR1B-216ENST00000537335 ELK3P41970 407 aa12.07□□□□□ -0.48
POLR1B-216ENST00000537335 CDK9P50750 372 aaKnown RBP12.07□□□□□ -0.48
POLR1B-216ENST00000537335 RPS7P62081 194 aaKnown RBP12.07□□□□□ -0.48
POLR1B-216ENST00000537335 NADK2Q4G0N4 442 aa12.07□□□□□ -0.48
POLR1B-216ENST00000537335 SYCE2Q6PIF2 218 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms