RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 FAM193AP78312 1265 aa12.99□□□□□ -0.33
PRKDC-207ENST00000536483 TCP11X2Q5H9J9 407 aa12.99□□□□□ -0.33
PRKDC-207ENST00000536483 SIX6OS1Q8N1H7 587 aa12.99□□□□□ -0.33
PRKDC-207ENST00000536483 MINDY1Q8N5J2 469 aa12.99□□□□□ -0.33
PRKDC-207ENST00000536483 BHMTQ93088 406 aa12.99□□□□□ -0.33
PRKDC-207ENST00000536483 PLD4Q96BZ4 506 aa12.99□□□□□ -0.33
PRKDC-207ENST00000536483 HSPA12BQ96MM6 686 aa12.99□□□□□ -0.33
PRKDC-207ENST00000536483 LHX5Q9H2C1 402 aa12.99□□□□□ -0.33
PRKDC-207ENST00000536483 CACNA2D2Q9NY47 1150 aa12.99□□□□□ -0.33
PRKDC-207ENST00000536483 KLK13Q9UKR3 277 aa12.99□□□□□ -0.33
PRKDC-207ENST00000536483 STRIP2Q9ULQ0 834 aa12.99□□□□□ -0.33
PRKDC-207ENST00000536483 PCDHGC3Q9UN70 934 aa12.99□□□□□ -0.33
PRKDC-207ENST00000536483 ADAMTS9Q9P2N4 1935 aa12.99□□□□□ -0.33
PRKDC-207ENST00000536483 SRRM3A6NNA2 597 aaPredicted RBP12.98□□□□□ -0.33
PRKDC-207ENST00000536483 KCNJ18B7U540 433 aa12.98□□□□□ -0.33
PRKDC-207ENST00000536483 WASH3PC4AMC7 463 aa12.98□□□□□ -0.33
PRKDC-207ENST00000536483 M0QYV0 167 aa12.98□□□□□ -0.33
PRKDC-207ENST00000536483 ARHGAP33O14559 1287 aa12.98□□□□□ -0.33
PRKDC-207ENST00000536483 SART1O43290 800 aaKnown RBP12.98□□□□□ -0.33
PRKDC-207ENST00000536483 IGLV3-27P01718 113 aa12.98□□□□□ -0.33
PRKDC-207ENST00000536483 CISD3P0C7P0 127 aa12.98□□□□□ -0.33
PRKDC-207ENST00000536483 DGKGP49619 791 aa12.98□□□□□ -0.33
PRKDC-207ENST00000536483 RING1Q06587 406 aa12.98□□□□□ -0.33
PRKDC-207ENST00000536483 KCNMA1Q12791 1236 aa12.98□□□□□ -0.33
PRKDC-207ENST00000536483 EFEMP1Q12805 493 aa12.98□□□□□ -0.33
PRKDC-207ENST00000536483 KCNJ12Q14500 433 aa12.98□□□□□ -0.33
PRKDC-207ENST00000536483 RABEPKQ7Z6M1 372 aa12.98□□□□□ -0.33
PRKDC-207ENST00000536483 FAM71AQ8IYT1 594 aa12.98□□□□□ -0.33
PRKDC-207ENST00000536483 RGL4Q8IZJ4 473 aa12.98□□□□□ -0.33
PRKDC-207ENST00000536483 AZIN2Q96A70 460 aa12.98□□□□□ -0.33
PRKDC-207ENST00000536483 GABRG3Q99928 467 aa12.98□□□□□ -0.33
PRKDC-207ENST00000536483 NAA15Q9BXJ9 866 aaKnown RBP12.98□□□□□ -0.33
PRKDC-207ENST00000536483 SAMSN1Q9NSI8 373 aaKnown RBP12.98□□□□□ -0.33
PRKDC-207ENST00000536483 PLK2Q9NYY3 685 aa12.98□□□□□ -0.33
PRKDC-207ENST00000536483 AGO1Q9UL18 857 aaKnown RBP12.98□□□□□ -0.33
PRKDC-207ENST00000536483 SLC27A6Q9Y2P4 619 aa12.98□□□□□ -0.33
PRKDC-207ENST00000536483 MSRB2Q9Y3D2 182 aa12.98□□□□□ -0.33
PRKDC-207ENST00000536483 NFE2L3Q9Y4A8 694 aa12.98□□□□□ -0.33
PRKDC-207ENST00000536483 NEUROG3Q9Y4Z2 214 aa12.98□□□□□ -0.33
PRKDC-207ENST00000536483 ZFYVE26Q68DK2 2539 aa12.98□□□□□ -0.33
PRKDC-207ENST00000536483 MYH10P35580 1976 aa12.98□□□□□ -0.33
PRKDC-207ENST00000536483 CEP192Q8TEP8 1941 aa12.98□□□□□ -0.33
PRKDC-207ENST00000536483 NDUFS2O75306 463 aa12.97□□□□□ -0.33
PRKDC-207ENST00000536483 LTFP02788 710 aa12.97□□□□□ -0.33
PRKDC-207ENST00000536483 FYNP06241 537 aa12.97□□□□□ -0.33
PRKDC-207ENST00000536483 KRT5P13647 590 aa12.97□□□□□ -0.33
PRKDC-207ENST00000536483 CD59P13987 128 aa12.97□□□□□ -0.33
PRKDC-207ENST00000536483 GNA15P30679 374 aa12.97□□□□□ -0.33
PRKDC-207ENST00000536483 CLCN1P35523 988 aa12.97□□□□□ -0.33
PRKDC-207ENST00000536483 ZNF445P59923 1031 aa12.97□□□□□ -0.33
PRKDC-207ENST00000536483 NNTQ13423 1086 aa12.97□□□□□ -0.33
PRKDC-207ENST00000536483 KLHDC7AQ5VTJ3 777 aa12.97□□□□□ -0.33
PRKDC-207ENST00000536483 FYB2Q5VWT5 728 aa12.97□□□□□ -0.33
PRKDC-207ENST00000536483 GJB7Q6PEY0 223 aa12.97□□□□□ -0.33
PRKDC-207ENST00000536483 KIAA1324Q6UXG2 1013 aaKnown RBP12.97□□□□□ -0.33
PRKDC-207ENST00000536483 RSRC2Q7L4I2 434 aaKnown RBP12.97□□□□□ -0.33
PRKDC-207ENST00000536483 ZCCHC14Q8WYQ9 949 aaKnown RBP12.97□□□□□ -0.33
PRKDC-207ENST00000536483 NDRG1Q92597 394 aaKnown RBP12.97□□□□□ -0.33
PRKDC-207ENST00000536483 P2RY11Q96G91 374 aa12.97□□□□□ -0.33
PRKDC-207ENST00000536483 ZNF419Q96HQ0 510 aaPredicted RBP12.97□□□□□ -0.33
PRKDC-207ENST00000536483 MRGPRX1Q96LB2 322 aa12.97□□□□□ -0.33
PRKDC-207ENST00000536483 PLCB1Q9NQ66 1216 aa12.97□□□□□ -0.33
PRKDC-207ENST00000536483 ANO10Q9NW15 660 aa12.97□□□□□ -0.33
PRKDC-207ENST00000536483 DNAJC12Q9UKB3 198 aa12.97□□□□□ -0.33
PRKDC-207ENST00000536483 DAAM1Q9Y4D1 1078 aa12.97□□□□□ -0.33
PRKDC-207ENST00000536483 DMXL2Q8TDJ6 3036 aa12.97□□□□□ -0.33
PRKDC-207ENST00000536483 PCDH15Q96QU1 1955 aa12.96□□□□□ -0.33
PRKDC-207ENST00000536483 LAMA5O15230 3695 aa12.96□□□□□ -0.33
PRKDC-207ENST00000536483 SLC12A8A0AV02 714 aa12.96□□□□□ -0.33
PRKDC-207ENST00000536483 FOXN3O00409 490 aaPredicted RBP12.96□□□□□ -0.33
PRKDC-207ENST00000536483 LETM1O95202 739 aaPredicted RBP12.96□□□□□ -0.33
PRKDC-207ENST00000536483 CALCAP01258 141 aa12.96□□□□□ -0.33
PRKDC-207ENST00000536483 SYPP08247 313 aa12.96□□□□□ -0.33
PRKDC-207ENST00000536483 LCP1P13796 627 aa12.96□□□□□ -0.33
PRKDC-207ENST00000536483 MAOBP27338 520 aa12.96□□□□□ -0.33
PRKDC-207ENST00000536483 CORO1AP31146 461 aaKnown RBP12.96□□□□□ -0.33
PRKDC-207ENST00000536483 RGS7P49802 495 aa12.96□□□□□ -0.33
PRKDC-207ENST00000536483 BPIFB4P59827 614 aa12.96□□□□□ -0.33
PRKDC-207ENST00000536483 APBA1Q02410 837 aa12.96□□□□□ -0.33
PRKDC-207ENST00000536483 PTK2Q05397 1052 aa12.96□□□□□ -0.33
PRKDC-207ENST00000536483 EIF4EBP2Q13542 120 aaPredicted RBP12.96□□□□□ -0.33
PRKDC-207ENST00000536483 PLEKHG6Q3KR16 790 aa12.96□□□□□ -0.33
PRKDC-207ENST00000536483 CCDC183Q5T5S1 534 aa12.96□□□□□ -0.33
PRKDC-207ENST00000536483 DENND1BQ6P3S1 775 aa12.96□□□□□ -0.33
PRKDC-207ENST00000536483 CREBRFQ8IUR6 639 aa12.96□□□□□ -0.33
PRKDC-207ENST00000536483 FMNL3Q8IVF7 1028 aa12.96□□□□□ -0.33
PRKDC-207ENST00000536483 CHCHD4Q8N4Q1 142 aa12.96□□□□□ -0.33
PRKDC-207ENST00000536483 WDTC1Q8N5D0 677 aa12.96□□□□□ -0.33
PRKDC-207ENST00000536483 RNF139Q8WU17 664 aa12.96□□□□□ -0.33
PRKDC-207ENST00000536483 CAMK1GQ96NX5 476 aa12.96□□□□□ -0.33
PRKDC-207ENST00000536483 TRIM62Q9BVG3 475 aa12.96□□□□□ -0.33
PRKDC-207ENST00000536483 SLC2A11Q9BYW1 496 aa12.96□□□□□ -0.33
PRKDC-207ENST00000536483 DNAAF2Q9NVR5 837 aaKnown RBP12.96□□□□□ -0.33
PRKDC-207ENST00000536483 ASNSD1Q9NWL6 643 aa12.96□□□□□ -0.33
PRKDC-207ENST00000536483 CYTH4Q9UIA0 394 aa12.96□□□□□ -0.33
PRKDC-207ENST00000536483 RASAL2Q9UJF2 1139 aa12.96□□□□□ -0.33
PRKDC-207ENST00000536483 STON1Q9Y6Q2 735 aa12.96□□□□□ -0.33
PRKDC-207ENST00000536483 FREM2Q5SZK8 3169 aa12.96□□□□□ -0.33
PRKDC-207ENST00000536483 PKD1L2Q7Z442 2459 aa12.96□□□□□ -0.34
PRKDC-207ENST00000536483 ATRXP46100 2492 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms