RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 GLRA4Q5JXX5 417 aa19.91■□□□□ 0.78
CAPN1-226ENST00000533820 ATG14Q6ZNE5 492 aa19.91■□□□□ 0.78
CAPN1-226ENST00000533820 ILDR2Q71H61 639 aa19.91■□□□□ 0.78
CAPN1-226ENST00000533820 SLC26A7Q8TE54 656 aa19.91■□□□□ 0.78
CAPN1-226ENST00000533820 ANGPTL2Q9UKU9 493 aa19.91■□□□□ 0.78
CAPN1-226ENST00000533820 TNFSF13BQ9Y275 285 aa19.91■□□□□ 0.78
CAPN1-226ENST00000533820 PAPSS1O43252 624 aaPredicted RBP19.91■□□□□ 0.78
CAPN1-226ENST00000533820 SUPT3HO75486 399 aa19.91■□□□□ 0.78
CAPN1-226ENST00000533820 PDGFRBP09619 1106 aa19.91■□□□□ 0.78
CAPN1-226ENST00000533820 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.91■□□□□ 0.78
CAPN1-226ENST00000533820 KIF12Q96FN5 646 aa19.91■□□□□ 0.78
CAPN1-226ENST00000533820 SPATC1LQ9H0A9 340 aa19.91■□□□□ 0.78
CAPN1-226ENST00000533820 IFT122Q9HBG6 1241 aa19.91■□□□□ 0.78
CAPN1-226ENST00000533820 GBA2Q9HCG7 927 aaPredicted RBP19.91■□□□□ 0.78
CAPN1-226ENST00000533820 MAN1C1Q9NR34 630 aa19.91■□□□□ 0.78
CAPN1-226ENST00000533820 DPP3Q9NY33 737 aa19.91■□□□□ 0.78
CAPN1-226ENST00000533820 ZNF180Q9UJW8 692 aa19.91■□□□□ 0.78
CAPN1-226ENST00000533820 A6NJR5 290 aa19.91■□□□□ 0.78
CAPN1-226ENST00000533820 TRDMT1O14717 391 aaKnown RBP19.91■□□□□ 0.78
CAPN1-226ENST00000533820 GABBR2O75899 941 aa19.91■□□□□ 0.78
CAPN1-226ENST00000533820 SPATA31D3P0C874 917 aa19.91■□□□□ 0.78
CAPN1-226ENST00000533820 P4HA1P13674 534 aa19.91■□□□□ 0.78
CAPN1-226ENST00000533820 ADORA2BP29275 332 aa19.91■□□□□ 0.78
CAPN1-226ENST00000533820 RAP1GDS1P52306 607 aa19.91■□□□□ 0.78
CAPN1-226ENST00000533820 DPY19L2Q6NUT2 758 aa19.91■□□□□ 0.78
CAPN1-226ENST00000533820 LBX2Q6XYB7 198 aa19.91■□□□□ 0.78
CAPN1-226ENST00000533820 SPATA31D4Q6ZUB0 917 aa19.91■□□□□ 0.78
CAPN1-226ENST00000533820 RAPH1Q70E73 1250 aa19.91■□□□□ 0.78
CAPN1-226ENST00000533820 KCNN1Q92952 543 aa19.91■□□□□ 0.78
CAPN1-226ENST00000533820 ABTB1Q969K4 478 aaPredicted RBP19.91■□□□□ 0.78
CAPN1-226ENST00000533820 TSPAN18Q96SJ8 248 aa19.91■□□□□ 0.78
CAPN1-226ENST00000533820 ARF4P18085 180 aaPredicted RBP19.9■□□□□ 0.78
CAPN1-226ENST00000533820 CCNFP41002 786 aa19.9■□□□□ 0.78
CAPN1-226ENST00000533820 GJA8P48165 433 aa19.9■□□□□ 0.78
CAPN1-226ENST00000533820 PDK2Q15119 407 aa19.9■□□□□ 0.78
CAPN1-226ENST00000533820 LPCAT4Q643R3 524 aa19.9■□□□□ 0.78
CAPN1-226ENST00000533820 HEATR6Q6AI08 1181 aaKnown RBP19.9■□□□□ 0.78
CAPN1-226ENST00000533820 OLFML1Q6UWY5 402 aa19.9■□□□□ 0.78
CAPN1-226ENST00000533820 CXorf38Q8TB03 319 aa19.9■□□□□ 0.78
CAPN1-226ENST00000533820 A8MXQ7 604 aa19.9■□□□□ 0.78
CAPN1-226ENST00000533820 MAGEC1O60732 1142 aa19.9■□□□□ 0.78
CAPN1-226ENST00000533820 PROCP04070 461 aa19.9■□□□□ 0.78
CAPN1-226ENST00000533820 ALDOAP04075 364 aaKnown RBP19.9■□□□□ 0.78
CAPN1-226ENST00000533820 MGAT1P26572 445 aa19.9■□□□□ 0.78
CAPN1-226ENST00000533820 CRHR1P34998 444 aa19.9■□□□□ 0.78
CAPN1-226ENST00000533820 SLC1A6P48664 564 aa19.9■□□□□ 0.78
CAPN1-226ENST00000533820 DALRD3Q5D0E6 543 aaKnown RBP19.9■□□□□ 0.78
CAPN1-226ENST00000533820 CFAP157Q5JU67 520 aa19.9■□□□□ 0.78
CAPN1-226ENST00000533820 C10orf107Q8IVU9 208 aa19.9■□□□□ 0.78
CAPN1-226ENST00000533820 WDR75Q8IWA0 830 aaKnown RBP19.9■□□□□ 0.78
CAPN1-226ENST00000533820 TNS4Q8IZW8 715 aa19.9■□□□□ 0.78
CAPN1-226ENST00000533820 CCDC185Q8N715 623 aa19.9■□□□□ 0.78
CAPN1-226ENST00000533820 KHSRPQ92945 711 aaKnown RBP eCLIP19.9■□□□□ 0.78
CAPN1-226ENST00000533820 THAP1Q9NVV9 213 aa19.9■□□□□ 0.78
CAPN1-226ENST00000533820 DNAH12Q6ZR08 3092 aa19.9■□□□□ 0.78
CAPN1-226ENST00000533820 IGKV6-21A0A0C4DH24 114 aa19.89■□□□□ 0.78
CAPN1-226ENST00000533820 BCLAF3A2AJT9 711 aaKnown RBP19.89■□□□□ 0.78
CAPN1-226ENST00000533820 FAM159BA6NKW6 160 aa19.89■□□□□ 0.78
CAPN1-226ENST00000533820 USP12O75317 370 aa19.89■□□□□ 0.78
CAPN1-226ENST00000533820 TXNP10599 105 aaKnown RBP19.89■□□□□ 0.78
CAPN1-226ENST00000533820 GOT1P17174 413 aa19.89■□□□□ 0.78
CAPN1-226ENST00000533820 TGM2P21980 687 aa19.89■□□□□ 0.78
CAPN1-226ENST00000533820 MLH1P40692 756 aa19.89■□□□□ 0.78
CAPN1-226ENST00000533820 ACTR3P61158 418 aa19.89■□□□□ 0.78
CAPN1-226ENST00000533820 AP2B1P63010 937 aa19.89■□□□□ 0.78
CAPN1-226ENST00000533820 TCHHL1Q5QJ38 904 aaPredicted RBP19.89■□□□□ 0.78
CAPN1-226ENST00000533820 CELF3Q5SZQ8 465 aaKnown RBP19.89■□□□□ 0.78
CAPN1-226ENST00000533820 LCLAT1Q6UWP7 414 aa19.89■□□□□ 0.78
CAPN1-226ENST00000533820 CMC1Q7Z7K0 106 aa19.89■□□□□ 0.78
CAPN1-226ENST00000533820 TMEM110Q86TL2 294 aa19.89■□□□□ 0.78
CAPN1-226ENST00000533820 FAM131BQ86XD5 332 aa19.89■□□□□ 0.78
CAPN1-226ENST00000533820 RNF168Q8IYW5 571 aaPredicted RBP19.89■□□□□ 0.78
CAPN1-226ENST00000533820 GBP5Q96PP8 586 aa19.89■□□□□ 0.78
CAPN1-226ENST00000533820 TUBGCP5Q96RT8 1024 aa19.89■□□□□ 0.78
CAPN1-226ENST00000533820 DPEP3Q9H4B8 488 aa19.89■□□□□ 0.78
CAPN1-226ENST00000533820 PDZD7Q9H5P4 517 aa19.89■□□□□ 0.78
CAPN1-226ENST00000533820 DMAP1Q9NPF5 467 aaPredicted RBP19.89■□□□□ 0.78
CAPN1-226ENST00000533820 HES2Q9Y543 173 aa19.89■□□□□ 0.78
CAPN1-226ENST00000533820 PPME1Q9Y570 386 aa19.89■□□□□ 0.78
CAPN1-226ENST00000533820 ZBTB7AO95365 584 aa19.89■□□□□ 0.77
CAPN1-226ENST00000533820 ERVK-10P10266 1014 aa19.89■□□□□ 0.77
CAPN1-226ENST00000533820 INSRRP14616 1297 aa19.89■□□□□ 0.77
CAPN1-226ENST00000533820 PDE1CQ14123 709 aaPredicted RBP19.89■□□□□ 0.77
CAPN1-226ENST00000533820 SLC9A4Q6AI14 798 aa19.89■□□□□ 0.77
CAPN1-226ENST00000533820 CCNYQ8ND76 341 aa19.89■□□□□ 0.77
CAPN1-226ENST00000533820 OR6B3Q8NGW1 331 aa19.89■□□□□ 0.77
CAPN1-226ENST00000533820 PGBD4Q96DM1 585 aa19.89■□□□□ 0.77
CAPN1-226ENST00000533820 AGAP3Q96P47 875 aa19.89■□□□□ 0.77
CAPN1-226ENST00000533820 OXCT2Q9BYC2 517 aaPredicted RBP19.89■□□□□ 0.77
CAPN1-226ENST00000533820 EMCNQ9ULC0 261 aa19.89■□□□□ 0.77
CAPN1-226ENST00000533820 APOBEC2Q9Y235 224 aaKnown RBP19.89■□□□□ 0.77
CAPN1-226ENST00000533820 SIP14410 1827 aa19.89■□□□□ 0.77
CAPN1-226ENST00000533820 SNNO75324 88 aaPredicted RBP19.89■□□□□ 0.77
CAPN1-226ENST00000533820 SLC6A3Q01959 620 aa19.89■□□□□ 0.77
CAPN1-226ENST00000533820 HIC1Q14526 733 aa19.89■□□□□ 0.77
CAPN1-226ENST00000533820 TRMT5Q32P41 509 aaKnown RBP19.89■□□□□ 0.77
CAPN1-226ENST00000533820 NET1Q7Z628 596 aaPredicted RBP19.89■□□□□ 0.77
CAPN1-226ENST00000533820 PIWIL2Q8TC59 973 aaKnown RBP19.89■□□□□ 0.77
CAPN1-226ENST00000533820 AP4E1Q9UPM8 1137 aa19.89■□□□□ 0.77
CAPN1-226ENST00000533820 MCM3APO60318 1980 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms