RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 DUPD1Q68J44 220 aa17.99■□□□□ 0.47
PHRF1-205ENST00000533464 MREGQ8N565 214 aa17.99■□□□□ 0.47
PHRF1-205ENST00000533464 SEMA4DQ92854 862 aa17.99■□□□□ 0.47
PHRF1-205ENST00000533464 THAP11Q96EK4 314 aa17.99■□□□□ 0.47
PHRF1-205ENST00000533464 ADGRE3Q9BY15 652 aa17.99■□□□□ 0.47
PHRF1-205ENST00000533464 DTNAQ9Y4J8 743 aa17.99■□□□□ 0.47
PHRF1-205ENST00000533464 TRIM13O60858 407 aa17.99■□□□□ 0.47
PHRF1-205ENST00000533464 ADAM2Q99965 735 aa17.99■□□□□ 0.47
PHRF1-205ENST00000533464 ETNK2Q9NVF9 386 aa17.99■□□□□ 0.47
PHRF1-205ENST00000533464 RIPK3Q9Y572 518 aa17.99■□□□□ 0.47
PHRF1-205ENST00000533464 C16orf96A6NNT2 1141 aa17.99■□□□□ 0.47
PHRF1-205ENST00000533464 FCHO1O14526 889 aa17.99■□□□□ 0.47
PHRF1-205ENST00000533464 MPOP05164 745 aa17.99■□□□□ 0.47
PHRF1-205ENST00000533464 AUHQ13825 339 aaKnown RBP17.99■□□□□ 0.47
PHRF1-205ENST00000533464 DMC1Q14565 340 aa17.99■□□□□ 0.47
PHRF1-205ENST00000533464 ZNF470Q6ECI4 717 aa17.99■□□□□ 0.47
PHRF1-205ENST00000533464 CXCL17Q6UXB2 119 aa17.99■□□□□ 0.47
PHRF1-205ENST00000533464 KLRG1Q96E93 195 aa17.99■□□□□ 0.47
PHRF1-205ENST00000533464 APBA2Q99767 749 aa17.99■□□□□ 0.47
PHRF1-205ENST00000533464 TCF7L2Q9NQB0 619 aa17.99■□□□□ 0.47
PHRF1-205ENST00000533464 YWHAQP27348 245 aa17.99■□□□□ 0.47
PHRF1-205ENST00000533464 SCNN1GP51170 649 aa17.99■□□□□ 0.47
PHRF1-205ENST00000533464 TEKT4Q8WW24 435 aa17.99■□□□□ 0.47
PHRF1-205ENST00000533464 KREMEN1Q96MU8 473 aa17.99■□□□□ 0.47
PHRF1-205ENST00000533464 EIF2AQ9BY44 585 aaKnown RBP17.99■□□□□ 0.47
PHRF1-205ENST00000533464 THAP1Q9NVV9 213 aa17.99■□□□□ 0.47
PHRF1-205ENST00000533464 EIF3LQ9Y262 564 aaKnown RBP17.99■□□□□ 0.47
PHRF1-205ENST00000533464 UMODL1Q5DID0 1318 aa17.99■□□□□ 0.47
PHRF1-205ENST00000533464 TBKBP1A7MCY6 615 aa17.98■□□□□ 0.47
PHRF1-205ENST00000533464 MZF1P28698 734 aaPredicted RBP17.98■□□□□ 0.47
PHRF1-205ENST00000533464 RPL22P35268 128 aaKnown RBP17.98■□□□□ 0.47
PHRF1-205ENST00000533464 SLC45A4Q5BKX6 768 aa17.98■□□□□ 0.47
PHRF1-205ENST00000533464 SPANXN3Q5MJ09 141 aa17.98■□□□□ 0.47
PHRF1-205ENST00000533464 HGSNATQ68CP4 663 aa17.98■□□□□ 0.47
PHRF1-205ENST00000533464 ANKS3Q6ZW76 656 aa17.98■□□□□ 0.47
PHRF1-205ENST00000533464 TMEM86AQ8N2M4 240 aa17.98■□□□□ 0.47
PHRF1-205ENST00000533464 TMEM161AQ9NX61 479 aa17.98■□□□□ 0.47
PHRF1-205ENST00000533464 SPASTQ9UBP0 616 aa17.98■□□□□ 0.47
PHRF1-205ENST00000533464 SPTLC1O15269 473 aa17.98■□□□□ 0.47
PHRF1-205ENST00000533464 TBC1D4O60343 1298 aa17.98■□□□□ 0.47
PHRF1-205ENST00000533464 ZCCHC23Q6ZST2 131 aa17.98■□□□□ 0.47
PHRF1-205ENST00000533464 MYO1HQ8N1T3 1032 aa17.98■□□□□ 0.47
PHRF1-205ENST00000533464 LRRC39Q96DD0 335 aa17.98■□□□□ 0.47
PHRF1-205ENST00000533464 OTUB1Q96FW1 271 aaPredicted RBP17.98■□□□□ 0.47
PHRF1-205ENST00000533464 PRPF18Q99633 342 aaKnown RBP17.98■□□□□ 0.47
PHRF1-205ENST00000533464 SNRNP25Q9BV90 132 aaKnown RBP17.98■□□□□ 0.47
PHRF1-205ENST00000533464 TRDMT1O14717 391 aaKnown RBP17.98■□□□□ 0.47
PHRF1-205ENST00000533464 OPLAHO14841 1288 aa17.98■□□□□ 0.47
PHRF1-205ENST00000533464 DDHD2O94830 711 aa17.98■□□□□ 0.47
PHRF1-205ENST00000533464 SLC39A12Q504Y0 691 aa17.98■□□□□ 0.47
PHRF1-205ENST00000533464 HSFY1Q96LI6 401 aa17.98■□□□□ 0.47
PHRF1-205ENST00000533464 SMPD4Q9NXE4 827 aa17.98■□□□□ 0.47
PHRF1-205ENST00000533464 BLOC1S6Q9UL45 172 aa17.98■□□□□ 0.47
PHRF1-205ENST00000533464 TPBGLP0DKB5 382 aa17.98■□□□□ 0.47
PHRF1-205ENST00000533464 PIGZQ86VD9 579 aa17.98■□□□□ 0.47
PHRF1-205ENST00000533464 LPCAT1Q8NF37 534 aa17.98■□□□□ 0.47
PHRF1-205ENST00000533464 CPNE1Q99829 537 aa17.98■□□□□ 0.47
PHRF1-205ENST00000533464 PRKD2Q9BZL6 878 aa17.98■□□□□ 0.47
PHRF1-205ENST00000533464 FSCN2O14926 492 aa17.97■□□□□ 0.47
PHRF1-205ENST00000533464 EPHB3P54753 998 aa17.97■□□□□ 0.47
PHRF1-205ENST00000533464 TAS2R40P59535 323 aa17.97■□□□□ 0.47
PHRF1-205ENST00000533464 DSG1Q02413 1049 aa17.97■□□□□ 0.47
PHRF1-205ENST00000533464 SKIV2LQ15477 1246 aaKnown RBP17.97■□□□□ 0.47
PHRF1-205ENST00000533464 CCDC153Q494R4 210 aa17.97■□□□□ 0.47
PHRF1-205ENST00000533464 CACHD1Q5VU97 1274 aa17.97■□□□□ 0.47
PHRF1-205ENST00000533464 ALLCQ8N6M5 410 aa17.97■□□□□ 0.47
PHRF1-205ENST00000533464 ZNF384Q8TF68 577 aa17.97■□□□□ 0.47
PHRF1-205ENST00000533464 USP6NLQ92738 828 aa17.97■□□□□ 0.47
PHRF1-205ENST00000533464 PCDHB18PQ96TA0 734 aa17.97■□□□□ 0.47
PHRF1-205ENST00000533464 YME1L1Q96TA2 773 aa17.97■□□□□ 0.47
PHRF1-205ENST00000533464 NPR3P17342 541 aa17.97■□□□□ 0.47
PHRF1-205ENST00000533464 SERPINB3P29508 390 aa17.97■□□□□ 0.47
PHRF1-205ENST00000533464 DAB2P98082 770 aa17.97■□□□□ 0.47
PHRF1-205ENST00000533464 NPY5RQ15761 445 aa17.97■□□□□ 0.47
PHRF1-205ENST00000533464 ABHD15Q6UXT9 468 aa17.97■□□□□ 0.47
PHRF1-205ENST00000533464 RNF157Q96PX1 679 aa17.97■□□□□ 0.47
PHRF1-205ENST00000533464 VAT1Q99536 393 aa17.97■□□□□ 0.47
PHRF1-205ENST00000533464 CCT7Q99832 543 aa17.97■□□□□ 0.47
PHRF1-205ENST00000533464 OR12D3Q9UGF7 316 aa17.97■□□□□ 0.47
PHRF1-205ENST00000533464 RBAK-RBAKDNI3L0D1 243 aa17.97■□□□□ 0.47
PHRF1-205ENST00000533464 NOL4O94818 638 aa17.97■□□□□ 0.47
PHRF1-205ENST00000533464 TRUB2O95900 331 aaKnown RBP17.97■□□□□ 0.47
PHRF1-205ENST00000533464 ATP6V1B1P15313 513 aa17.97■□□□□ 0.47
PHRF1-205ENST00000533464 PSMA4P25789 261 aaKnown RBP17.97■□□□□ 0.47
PHRF1-205ENST00000533464 RPA3P35244 121 aaPredicted RBP17.97■□□□□ 0.47
PHRF1-205ENST00000533464 PRKAA1Q13131 559 aa17.97■□□□□ 0.47
PHRF1-205ENST00000533464 VPS50Q96JG6 964 aa17.97■□□□□ 0.47
PHRF1-205ENST00000533464 PWWP2AQ96N64 755 aa17.97■□□□□ 0.47
PHRF1-205ENST00000533464 PDGFDQ9GZP0 370 aaPredicted RBP17.97■□□□□ 0.47
PHRF1-205ENST00000533464 C2CD2Q9Y426 696 aa17.97■□□□□ 0.47
PHRF1-205ENST00000533464 ENO4A6NNW6 628 aa17.97■□□□□ 0.47
PHRF1-205ENST00000533464 XPO1O14980 1071 aaKnown RBP17.97■□□□□ 0.47
PHRF1-205ENST00000533464 MMRN1Q13201 1228 aa17.97■□□□□ 0.47
PHRF1-205ENST00000533464 PARP6Q2NL67 630 aa17.97■□□□□ 0.47
PHRF1-205ENST00000533464 AGKQ53H12 422 aa17.97■□□□□ 0.47
PHRF1-205ENST00000533464 TREML2Q5T2D2 321 aa17.97■□□□□ 0.47
PHRF1-205ENST00000533464 SH3BP5LQ7L8J4 393 aa17.97■□□□□ 0.47
PHRF1-205ENST00000533464 TMEM237Q96Q45 408 aa17.97■□□□□ 0.47
PHRF1-205ENST00000533464 ATP13A1Q9HD20 1204 aa17.97■□□□□ 0.47
PHRF1-205ENST00000533464 TEKT2Q9UIF3 430 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms