RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 TNRC6BQ9UPQ9 1833 aaKnown RBP13.6□□□□□ -0.23
COPB1-209ENST00000533096 GOLGA6L7A0A1B0GV03 622 aa13.6□□□□□ -0.23
COPB1-209ENST00000533096 PDXKO00764 312 aa13.6□□□□□ -0.23
COPB1-209ENST00000533096 ENC1O14682 589 aa13.6□□□□□ -0.23
COPB1-209ENST00000533096 PCDHGA12O60330 932 aa13.6□□□□□ -0.23
COPB1-209ENST00000533096 ZBED1O96006 694 aa13.6□□□□□ -0.23
COPB1-209ENST00000533096 ATP5BP06576 529 aaKnown RBP13.6□□□□□ -0.23
COPB1-209ENST00000533096 KRT13P13646 458 aa13.6□□□□□ -0.23
COPB1-209ENST00000533096 ABCB4P21439 1286 aa13.6□□□□□ -0.23
COPB1-209ENST00000533096 HOXD9P28356 352 aaPredicted RBP13.6□□□□□ -0.23
COPB1-209ENST00000533096 CTSKP43235 329 aa13.6□□□□□ -0.23
COPB1-209ENST00000533096 SLC8A3P57103 927 aa13.6□□□□□ -0.23
COPB1-209ENST00000533096 PPP3CAQ08209 521 aa13.6□□□□□ -0.23
COPB1-209ENST00000533096 INAVAQ3KP66 663 aa13.6□□□□□ -0.23
COPB1-209ENST00000533096 C6orf118Q5T5N4 469 aa13.6□□□□□ -0.23
COPB1-209ENST00000533096 KIAA0895LQ68EN5 471 aa13.6□□□□□ -0.23
COPB1-209ENST00000533096 ADIPOR2Q86V24 386 aa13.6□□□□□ -0.23
COPB1-209ENST00000533096 UBA3Q8TBC4 463 aa13.6□□□□□ -0.23
COPB1-209ENST00000533096 PLD4Q96BZ4 506 aa13.6□□□□□ -0.23
COPB1-209ENST00000533096 TMEM176AQ96HP8 235 aa13.6□□□□□ -0.23
COPB1-209ENST00000533096 CNDP2Q96KP4 475 aaKnown RBP13.6□□□□□ -0.23
COPB1-209ENST00000533096 SLC6A18Q96N87 628 aa13.6□□□□□ -0.23
COPB1-209ENST00000533096 UBL7Q96S82 380 aaPredicted RBP13.6□□□□□ -0.23
COPB1-209ENST00000533096 NIF3L1Q9GZT8 377 aa13.6□□□□□ -0.23
COPB1-209ENST00000533096 MAGEF1Q9HAY2 307 aa13.6□□□□□ -0.23
COPB1-209ENST00000533096 SGK2Q9HBY8 427 aa13.6□□□□□ -0.23
COPB1-209ENST00000533096 FBXL12Q9NXK8 326 aa13.6□□□□□ -0.23
COPB1-209ENST00000533096 GGA2Q9UJY4 613 aa13.6□□□□□ -0.23
COPB1-209ENST00000533096 HELZP42694 1942 aaKnown RBP13.59□□□□□ -0.23
COPB1-209ENST00000533096 A0A1B0GTQ1 180 aa13.59□□□□□ -0.23
COPB1-209ENST00000533096 TULP2O00295 520 aa13.59□□□□□ -0.23
COPB1-209ENST00000533096 RRP8O43159 456 aaKnown RBP13.59□□□□□ -0.23
COPB1-209ENST00000533096 CALUO43852 315 aaPredicted RBP13.59□□□□□ -0.23
COPB1-209ENST00000533096 KLRC4O43908 158 aa13.59□□□□□ -0.23
COPB1-209ENST00000533096 TBL1XO60907 577 aa13.59□□□□□ -0.23
COPB1-209ENST00000533096 YEATS4O95619 227 aa13.59□□□□□ -0.23
COPB1-209ENST00000533096 PABPC1P11940 636 aaKnown RBP13.59□□□□□ -0.23
COPB1-209ENST00000533096 CD70P32970 193 aa13.59□□□□□ -0.23
COPB1-209ENST00000533096 TRIP4Q15650 581 aaPredicted RBP13.59□□□□□ -0.23
COPB1-209ENST00000533096 TTC31Q49AM3 519 aaPredicted RBP13.59□□□□□ -0.23
COPB1-209ENST00000533096 BSPRYQ5W0U4 402 aa13.59□□□□□ -0.23
COPB1-209ENST00000533096 ZNF776Q68DI1 518 aaPredicted RBP13.59□□□□□ -0.23
COPB1-209ENST00000533096 RFWD3Q6PCD5 774 aa13.59□□□□□ -0.23
COPB1-209ENST00000533096 ZC3H3Q8IXZ2 948 aaKnown RBP13.59□□□□□ -0.23
COPB1-209ENST00000533096 SKA1Q96BD8 255 aa13.59□□□□□ -0.23
COPB1-209ENST00000533096 IPO9Q96P70 1041 aaKnown RBP13.59□□□□□ -0.23
COPB1-209ENST00000533096 BACH2Q9BYV9 841 aa13.59□□□□□ -0.23
COPB1-209ENST00000533096 NEUROG2Q9H2A3 272 aa13.59□□□□□ -0.23
COPB1-209ENST00000533096 LRRC4Q9HBW1 653 aa13.59□□□□□ -0.23
COPB1-209ENST00000533096 OSGEPQ9NPF4 335 aa13.59□□□□□ -0.23
COPB1-209ENST00000533096 ANKRD11Q6UB99 2663 aaPredicted RBP13.58□□□□□ -0.23
COPB1-209ENST00000533096 NBEAQ8NFP9 2946 aa13.58□□□□□ -0.24
COPB1-209ENST00000533096 PIK3R2O00459 728 aa13.58□□□□□ -0.24
COPB1-209ENST00000533096 VILLO15195 856 aa13.58□□□□□ -0.24
COPB1-209ENST00000533096 MSI1O43347 362 aaKnown RBP13.58□□□□□ -0.24
COPB1-209ENST00000533096 TLX3O43711 291 aaPredicted RBP13.58□□□□□ -0.24
COPB1-209ENST00000533096 DFNA5O60443 496 aa13.58□□□□□ -0.24
COPB1-209ENST00000533096 RNASEH1O60930 286 aaKnown RBP13.58□□□□□ -0.24
COPB1-209ENST00000533096 RNASEH2AO75792 299 aaKnown RBP13.58□□□□□ -0.24
COPB1-209ENST00000533096 IGHV4-34P06331 123 aa13.58□□□□□ -0.24
COPB1-209ENST00000533096 DLDP09622 509 aaKnown RBP13.58□□□□□ -0.24
COPB1-209ENST00000533096 SLFN14P0C7P3 912 aa13.58□□□□□ -0.24
COPB1-209ENST00000533096 LCP1P13796 627 aa13.58□□□□□ -0.24
COPB1-209ENST00000533096 HNF1BP35680 557 aa13.58□□□□□ -0.24
COPB1-209ENST00000533096 SGSHP51688 502 aa13.58□□□□□ -0.24
COPB1-209ENST00000533096 RAD23BP54727 409 aa13.58□□□□□ -0.24
COPB1-209ENST00000533096 GALCP54803 685 aa13.58□□□□□ -0.24
COPB1-209ENST00000533096 ST8SIA6P61647 398 aa13.58□□□□□ -0.24
COPB1-209ENST00000533096 RACK1P63244 317 aaKnown RBP13.58□□□□□ -0.24
COPB1-209ENST00000533096 ZBTB16Q05516 673 aa13.58□□□□□ -0.24
COPB1-209ENST00000533096 BNIP3Q12983 259 aa13.58□□□□□ -0.24
COPB1-209ENST00000533096 ADGRF1Q5T601 910 aa13.58□□□□□ -0.24
COPB1-209ENST00000533096 NCEH1Q6PIU2 408 aa13.58□□□□□ -0.24
COPB1-209ENST00000533096 ZNF605Q86T29 641 aa13.58□□□□□ -0.24
COPB1-209ENST00000533096 DHX40Q8IX18 779 aaKnown RBP13.58□□□□□ -0.24
COPB1-209ENST00000533096 FAM186BQ8IYM0 893 aa13.58□□□□□ -0.24
COPB1-209ENST00000533096 AHI1Q8N157 1196 aa13.58□□□□□ -0.24
COPB1-209ENST00000533096 ANKRD52Q8NB46 1076 aa13.58□□□□□ -0.24
COPB1-209ENST00000533096 SLC4A11Q8NBS3 891 aa13.58□□□□□ -0.24
COPB1-209ENST00000533096 WFIKKN2Q8TEU8 576 aa13.58□□□□□ -0.24
COPB1-209ENST00000533096 SEMA4DQ92854 862 aa13.58□□□□□ -0.24
COPB1-209ENST00000533096 TATDN2Q93075 761 aa13.58□□□□□ -0.24
COPB1-209ENST00000533096 EEF2KMTQ96G04 330 aa13.58□□□□□ -0.24
COPB1-209ENST00000533096 ELF4Q99607 663 aaPredicted RBP13.58□□□□□ -0.24
COPB1-209ENST00000533096 OMDQ99983 421 aa13.58□□□□□ -0.24
COPB1-209ENST00000533096 UBXN6Q9BZV1 441 aa13.58□□□□□ -0.24
COPB1-209ENST00000533096 EBF2Q9HAK2 575 aa13.58□□□□□ -0.24
COPB1-209ENST00000533096 CISHQ9NSE2 258 aa13.58□□□□□ -0.24
COPB1-209ENST00000533096 PI4KAP42356 2102 aa13.57□□□□□ -0.24
COPB1-209ENST00000533096 A0A1W2PP55 124 aa13.57□□□□□ -0.24
COPB1-209ENST00000533096 A0A1W2PPC4 97 aa13.57□□□□□ -0.24
COPB1-209ENST00000533096 WNT9AO14904 365 aa13.57□□□□□ -0.24
COPB1-209ENST00000533096 SIN3BO75182 1162 aa13.57□□□□□ -0.24
COPB1-209ENST00000533096 WNT1P04628 370 aa13.57□□□□□ -0.24
COPB1-209ENST00000533096 CD19P15391 556 aa13.57□□□□□ -0.24
COPB1-209ENST00000533096 NR2F2P24468 414 aa13.57□□□□□ -0.24
COPB1-209ENST00000533096 NUMBP49757 651 aa13.57□□□□□ -0.24
COPB1-209ENST00000533096 PDE4CQ08493 712 aa13.57□□□□□ -0.24
COPB1-209ENST00000533096 ADAM9Q13443 819 aa13.57□□□□□ -0.24
COPB1-209ENST00000533096 GOLGA7BQ2TAP0 167 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms